Basic Information

Gene Symbol
Onecut2
Assembly
GCA_963966015.1
Location
OZ014436.1:12018959-12024800[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-37 6.1e-34 116.4 0.4 3 78 346 421 344 422 0.97

Sequence Information

Coding Sequence
ATGATGGACAATATCGGAAAGATGATTGAGCAACAAACGCTTCAGGAACAGGTCGATTCTGGGGACGGCGTGGCGCATGCGACGCCAGGAGGCATGGAGACGCAAGCCGTCCGCATGAGGTTGATATCGCGTGCCGTGGTGGAGCGGCGTATTGTTAAACAGGAGGACAACGAGGGCAACCTCTCCGTCATCGTTCAGCCCCAGGAGGAGTCGAGAGACTCCGAGCTGTTAAGCCCTGGAAAGCTGTCCCCCACGTCCGTTAGTGTATCGGGAATTATGGACAGTAGTGACTTCAGAAGCTTACAACCGGAACCTACATACCAAACTCTAACTTCTGTCAACGGAAGGATGTCACCACCTGGATATAGCCCTAGCTCTTCTTACGCTACCTTAACACCGCTCCAACCTCTGCCGCCAATCTCAACCATGTCTGACAAGTTCGCTTATGGTCACGGTAATGTTTCTGGTTCATTTACAGTGATGCAAAATAATGGATTAGGTATCGGACTCGGTCTTGGTGTGAATGTGAATACGCCGTATGCGATGCCTTCGATGGGAATGACCCCTCCTCATAACTATTCCTCCCCAGGTATGGCGATGCAACAAACAAGCCCAATCAGTCCCCAAAGTGCTTACAGTCAAAATGGTTTACCGTCCCCACAAAAAAGTATATCTCCTCCAAGCTATGAATCCTATCCTTCTCAACGTGAACTTGTTTCTCGTACCTTGCAAAGTCCTCAGTTAAGTCCTCCTACCGCTTCGCTTAATTCGCCTGACGGGACCCTTGTGACCAGTTTTAGTGGCGGAACAATCAATGGTTTAACTCTTCAGCATCATACTCCAACTTTAGTTCAAATTGCACCATCTCATAGGGATTGCTCCCCATCACCTCCAGTTCTAACGCTTCAACAAGCGTCACAACAATCACAACAAAACCAGCAACAACAACAAACACAAACAATGCAAGTTACCGGGAAAAGTGGACAAATTTCGAATAATCAGTCGATTAGTGTGCCGGCTATAAGTGCAGACGTCGAGGAAATAAATACCAAAGAACTGGCTCAAAGGATCAGTGCCGAACTTAAAAGATATAGCATACCTCAAGCTATATTTGCCCAAAGGGTTTTGTGTAGGTCACAGGGTACTCTTTCAGATCTACTCAGAAATCCAAAACCATGGTCCAAACTCAAATCTGGAAGAGAAACTTTTAGGAGAATGTGGAAATGGCTTCAAGAACCTGAATTCCAAAGAATGTCAGCTCTTCGACTTGCAGCTGCACAGATTCCACAACGAGGGAGTTGCAAACGGAAAGAAGACCCAGTGACCAATCAGGAACAGTTACCTACTCCCAAGAAACCGAGATTGGTTTTCACAGACCTTCAACGACGTACACTGCAAGCTATTTTTAAGGAAACGAAAAGGCCTTCAAAAGAGATGCAGGTGACAATAGCAAGACAGTTAGGTCTTGAGCCCACAACAGTTGGCAATTTTTTCATGAACGCACGGCGAAGATCCATGGACAAATGGAAGGATGAGGATCcgaaaaatttaaataatttaCTACATGGGGATATGTCACCGGGGATGGGACAAGACGATCCTGATCAAGACGATATGGACAATGATTTAGACGATCAAGATGATGTGTTGTGA
Protein Sequence
MMDNIGKMIEQQTLQEQVDSGDGVAHATPGGMETQAVRMRLISRAVVERRIVKQEDNEGNLSVIVQPQEESRDSELLSPGKLSPTSVSVSGIMDSSDFRSLQPEPTYQTLTSVNGRMSPPGYSPSSSYATLTPLQPLPPISTMSDKFAYGHGNVSGSFTVMQNNGLGIGLGLGVNVNTPYAMPSMGMTPPHNYSSPGMAMQQTSPISPQSAYSQNGLPSPQKSISPPSYESYPSQRELVSRTLQSPQLSPPTASLNSPDGTLVTSFSGGTINGLTLQHHTPTLVQIAPSHRDCSPSPPVLTLQQASQQSQQNQQQQQTQTMQVTGKSGQISNNQSISVPAISADVEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMWKWLQEPEFQRMSALRLAAAQIPQRGSCKRKEDPVTNQEQLPTPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWKDEDPKNLNNLLHGDMSPGMGQDDPDQDDMDNDLDDQDDVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01185969;
90% Identity
iTF_00998447;
80% Identity
iTF_00130398;