Aobl000813.1
Basic Information
- Insect
- Aphidecta obliterata
- Gene Symbol
- retn
- Assembly
- GCA_963966015.1
- Location
- OZ014427.1:6814187-6826269[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-21 2e-17 63.9 0.0 12 89 75 150 71 150 0.94
Sequence Information
- Coding Sequence
- ATGGCGCGCTATTTTGCCATGCAGAACCGTTTAACCTCCGGGCCTGAGACAGTTCAATTTCATAAATGTCCACCAGGTGTACGAGCAAGGTTGCCACATCAGTATAGACTTGTTTCTGTTCCCCCCGAAGGGGTCTCCAGACAGCAATCGGAAGAAGTTTATCTACCGAATTCTAGGGAAGCTGCGGCATCCCCGCCCATATCTTTGATATGCATCGTGTACGTATGCAACACTCACGgaactcCTATCAATCGTCTTCCTATAATGGCGAAGTCAGTATTGGACCTATACGAATTGTATAACTTGGTTATTGCAAGAGGAGGACTGGTTGAtgtgataaataaaaaattatggcaGGAAATAATCAAGGGTTTGCATCTACCATCTTCTATCACTTCAGCAGCATTTACACTAAGAACGCAATATATGAAATACCTGTATCCTTACGAATGCGAGAAGAGGAATCTGAGCTCCCCGTCAGAATTGCAGGCGGCTATCGATGGAAACCGTAGAGAAGGCAGACGCAGTGGCTACAGCCAATACGAAGCAATGACCAGATCTCCAAACCCCACGAACCTATCTTCAATGGCACAGATGTCGCAGATGCAGCAGATACATTTGAACCGTATGACGACAGCTATGGCAGCTCAAGGTTTGGGAATCCCCAACGGCGTGCATCCAAGTCACCCCCAGCCTATGAGCCAGCCCACCAACGGCGGGCCGCTTCCAGGACTCGCCCCGAACGAACTCGAAGCCAGAATGATGAAATACGTCGAATATTTGAACAAGGAAATTCGGAACAGCGCAGCGGTAACGCCGGTAGCTGTGCCTCCCGTCAGGAATAATATTTCACCCACGAATCCCACCCAACAGATCCACCCTTACGAATTATCCAGAATGGCGTTGTGGAACATGTACAACAACAACCAGGCGCCGGTGGAACCTCAGAAAGAAGCACTCAACTTGGCCAACGGCACGACGTTGCCGAGATCGCCTGCAGTGAAAGAAGAACCGGAAGAAACGCAGGAAGAATGTTTACCTTCACCAAAGAAGATGAGAAAGGATGACAGTGAACCCATCACGACCACAATACCCTCAACAGCgacaaatataaaaattgacACTCGAGGGGATCCCCAGAATGGAGATAGCTCAATGGTAGTCAGCATGGAGTTCAACGGAATAAAATATCAAGGTGTTTTATTCGCTCAAAATTCGCGGACAAACGATAACAGGACTCCCATCATTTCCTAA
- Protein Sequence
- MARYFAMQNRLTSGPETVQFHKCPPGVRARLPHQYRLVSVPPEGVSRQQSEEVYLPNSREAAASPPISLICIVYVCNTHGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKRNLSSPSELQAAIDGNRREGRRSGYSQYEAMTRSPNPTNLSSMAQMSQMQQIHLNRMTTAMAAQGLGIPNGVHPSHPQPMSQPTNGGPLPGLAPNELEARMMKYVEYLNKEIRNSAAVTPVAVPPVRNNISPTNPTQQIHPYELSRMALWNMYNNNQAPVEPQKEALNLANGTTLPRSPAVKEEPEETQEECLPSPKKMRKDDSEPITTTIPSTATNIKIDTRGDPQNGDSSMVVSMEFNGIKYQGVLFAQNSRTNDNRTPIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01023628;
- 90% Identity
- -
- 80% Identity
- -