Aobl005618.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphidecta obliterata
Gene Symbol
jarid2b
Assembly
GCA_963966015.1
Location
OZ014428.1:28933259-28939339[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.4e-22 9.7e-19 68.1 0.1 6 89 1490 1571 1486 1571 0.93

Sequence Information

Coding Sequence
ATGAAGAGGAAACGTAGAGACTTGTGTCCTTCGCCACTTCTAGACGAAGAACCCAAGCGTACTAAAGTACATGCTCAACGCAAATTTGCACAAGGTTCAAATGTTAATAGTCCAGTGATAACTCCAGTGAAGGATTTTGAGAGAAACGATagatccaatttggatctcatccCAGAACCGGTAGAACTTCTTCCAATTCGCAGACAGAATACTGAAGATTTTTTGACGTTTTTATGTTTTCGTGGAACTCCTATATTACCACCCAATTTGAACTTTTTCAATACGGCTTCTATAGTTGATACTAATGGACAAGTTCACGAAATTAAGAGCGAATCTCCTAAGAATGGACCTATTGATACATCGGTCATTCCTAAAAGTGGAAGTGGTCCATCCGATAGACCTTTTATAGCATTTGGTGTTAGGAAGAGAGCTGATCCTATTGTCATAAGCAAACAAATGGAAAGAAAAAGAAGACACGCACTCGCTCTTCAAGCCTTGAGAAGGAAATATCAGGAACAAAAAATGGCTAAGATAAGAGCAGTTACAATCAGTAAATTATCGGAAAAGCCATCTAATAGAGCCACTGTCAGAACTAACGCGctattgaaattagaaaaagcTCCACAACCAGTTACAACAACGAAACCAGTAAGCCAAAAAAACAAAGTGAAAATAATATCTTCTAAAGCTGTTAATGCCCAAACACTAAGGAATATAAATACTAAAATAAAACCGCGTATGTGTTTACGCAGTTTTAGAGGTAGGTTTGTGCAACAAGAACTGCCATTTAGAGCGGTGAAAAATAGTAAATTACCAGATAAAAAAGGAGTAACAATCAAGAAGAAGatggaaatcaaaaagaatataaaaacTCCAATGAAAGTTATTTCCAAGAAAGAAATTTCTGCAGGAAAGAAAGGCCAAGGTAATGTTCAAaagattccaaaaaaaataaaagcagAAGACAATGAAGAAGCTAGTGTTAAAAGATCTAGTAAAGTTCCAGTGAAAGCTAAATTGAATGTGAAGAAATTAATCAAAAGAAGAATATTGATACCTAGTGCTTCCTTGGTTAAGTCTCGTGTTTTGAGATCTCAAACCGTAAAAAGTTGTAAAACATCACAATCGCGATTGACTAGAAGTGGTATAAATCGAAATCTAAAAAAATCAGCAGGGGAAACGGATAAGAAAATCGACACAGATCAAAAACCCAAACAATCAAAGAAAACCAAGGAAATAAGTCAACAAACTTCAACCATTTattcaaaaagaaatgaaaaattgggtGTGTGTAATCCGGAAGAaccaaataataaaatttctaaAATGGTAAAAACATCTGCAAGAGTTTTAAGAAATGATTTGAGCAGTTCCATTTCCAAAAACACTTCAAATAAATCTGAAGTTAGCAAGACGGATGATTTTCCTGATAAAAAGGAATCGGGAAACATAAAACAGAAAAAGGAAACTAAGTCTGAAAGCAAAAAAGGCAAGAAAACAATAGTTAAAGCAAAAGAAATTGAAGGTAAAGCTGATACCGAAAATATAAACTTGGCATTATTAATAACTGAGGAAAATGCTGACAAAAAAGGAGGAACTAAAAAGAACATTACAACACATAGAAGTGTTGAGGATAAATCAAACAAAAACAAAGCTTTTAAATTGGAGCCGTcggaaaatgaacaaaaatcttCACAAAGGCCATCTCGAAAAACTAAAGAAGCTGCAGCTATTTATATGGAAATTTTGAGTCATAAATTAGAACACGATAATAAGGTAGATGATGATACAATTTCAATAGATAGCTTTCCTGAATTACCAAATGTTAAGAGAACCGAGCAAAGAGAAAATGAACTCAAAGCCAAAGCAAATATATCAAAAACTGGCAAATCAAAAAGCAAACTGGAAAAACTCGCGGAACAAGAAGAAACAGATAGTTCTTCAGATGacgacaaaaatttaaaaaataatgaaattcattcaattaaaaGGAAAGAAGTAAGTGTTATTGTAGATActgaattgaaaaagaaaaatatgaagcagaaatctacgaaaaaaaataaaacattaggACATGTTGAGAAAATTCCATCAGAGAAATTTAATGAGAAAATATTAACCTCTAAAGAACATAaggagaaaaatgaaaaaaagagaGTGCAATCGGAAATGAAATTCCAGAATGAACGAGTGGagctcaaaaaaatcaaattggaaaaaaacatAATTAATCCTAAAAATAACATTAAAGCTGAAGCCTCTGAGGATGAAGAGCCGTTAAAACTCATGGCAGTTTCAAAAAAggaaatattaaaaatagtgAAAGTTGAAAtatctgaagaaaatgaaaagataaaAGACGCAATGTGTTTGAATATCAAGGAAGGTGGAACAAAGCAAAGTaaaataaaactggaaaaaacaGGAACGGAAACAAAAAAAGCAAAGATCACTGAAAAACaatgtaaaaaaattgaaaatgagaaattttttccagttgaaaagaATGTTTCTTTCAAGAACACTGCaacatttgaacaaaaaatttataaaaaactcAACTCCAAAGATTCTTCAGACTCTGATGAATGTTTGGCGAAAATTCCTAAGATTTCCAAAATGGTTACGgattcaaaaaacaaattgcTGCATACCAAACAAGATTCCGTAAGTCAAAATCTGATGGAAAAAAAGAGTCAGACAAAACCAACTGAAAATATTTCCTCGGATTCTGAAAACGAATGCTTAGCGAAGATACGAAAAATTCAAGGTGTTAAAGTGAAAGAACACACAGATAAAAGGCAGACAAGAAGAAGTTGCCAACAGAACAAACGAATTGAGTGTGATGACTCCGAAGACTCATTTCATCTAGAAGTgaaaattccaagaaaaaaattgttgactcgTAGCAAGTCTTCCAAAATTTCTTCCACCTCTAAAACTAAATCTAATTTGGATTTATCCAGCGCTCAGTCTAATGCATCTTCAATATCATGTCTAAGCGTGTCTCAAAAATATGCGAAAAACAAAAAAGGATTGAAGGTGGAAGTCGACTTCAGTGATTCAGATGAAGAACCTCTTTCAAAACTCACAGTAAATAAACAAACTGATAAAAACTCTACGGAAGAATTGAAAGAAGTAATATTGAGGAAACAAAAAGCCCTAATTGAATCTCTGCCAAGGAATAAGGGCAAGAAGAATAAGGAAAAAGAGTCAGTTAACAAAGAAAAACCTGAAGACCCACCAATTAAACTGAAACGAGAGTGCGCAAAAATACCCTCTAATTATCTTCCAATGTTCTCGTCTTCCGACGAcgacgaaaaatttttccatggcTTTTCACCAAAGAAcgagaagaaaaaagaaagtaTCTATTCACATTCATCGTTGGATTTTTTATCCAAAGATTTGGGGCGACGTTTCGGTAAAGAAAAGGTAAATATGTCTAATGAGCAAATCGAGAAATGGCTCAAAGATTCCGCAATGGCGGGTGATGCCAACAAAAAAAACGAGGAATTGAAATATTGCGAAGAAATTCCTATGGAAACGTCCCTCAATAAACTCAACTCGATCAATACGCAACAGTTGAAAAATCCTTTATCGGAACCAACTGGTTCTCTAGGTAGCAAAGATATCACccctgagaaaaaaaatcattcctgTGATGATAATTTGAAATCTCCAATGTATAAATCTCCagacagaaaaccaatattcaGGAAGGAAAAGGCAAAGGTTGCCCCAACTGTAGGAGCGTTTTCTGTCAATAATGAAAGTAGCATTTATGCttttgaagaagaaatagagGAGGCTGTTAGTACACCTTTCAGGAGACCGTCTAGAAGACCTTCCTCGACTGCCACCTCTAAATCGGAAGATGAACTAGTCAAAAGCGAAGATCAATTGAAATTCGGTCAGTTTCGAAAACCAACACTGAAAAATGAAACGAACAAACATGAAGaacaaaaactgaaagaaacagaaattactttgaaacaagGTACAAGTAGTCAAAAACTAGCTCAGAAAACGAGCGTGACCCGCAATATTTTAGGAAAACCAATTAAAAGGAATAATTCAGAGCATTTCGATGATTTTAAATACAAAGTTCCAAGTTCTCCCAGTGCTAGTTCATCGTCGAGTGTTAAATTGTACAAAAACCAAAACAAGAACAAATCGAAACCTGTTGAAGATTGTAATCCGGTAAATATGGCGGACTTTCCTTGCAACGGACCGGGAGAGCTGGTAGAAGCACCCACATTTTATCCCACTGAAAGAGAATTCCAAGATCCACTGGAGTACATCGAGAAGATAGGAATTAGAGCAGAACAGTTTGGAATCTGCAAGATAGTCCCTCCTAACACTTTCAAACCCGAGTGTAAAGTCAGTGACGATATGAGGTTCACCTCTTATAATCAATATGTTCATAAGATGTTACATAGATGGGGCCCCAACATGAAAGAATTAATGGCCATCAAGAAGTACCTTCAAACTCAAAATATCAACTTGAAACAGCCCCCATGGATTGGAGGGATGGAAGTCGACCTTCCTAGGCTATACcagaccgttcaaagtttgggaGGTTTGAAGGAAGTGATAGAAAAAGAGAAATGGTCGAAGGTTTCTGATATCATGAGGATACCAAAGTCTGCGCAAGATAGAGTGACAAAGTTGGATGATATTTATTGTAAATATCTACTCCCATACGACACCCTATCTCcagatgaaagagataaatTACTGGACGAGGTTGAAACTGCTTGGGCCAAGAGAGAATCAAAGAACTTGTCTAAAATGCAAAAGTCGGTGGACGGTGTTGAAGCAGAGAACGAATCAGATTCAGAATCTGACGACGAAGTTGAGGAATGCATCACAAAAGGACGTAATATGGCTTTGAATGCTTTTTACAGAATAGCGAGAAACACTATGAGTATGTGGTTCAAAAGTTCCGCACCTTCGGTGCAAGATATAGAGCAAGAATTTTGGAAGCATGTTGTTCACAGAGAAAACCATATATGTGTCCATTCGGGTTCGATAGATTCCGGCAGCTGCGGATATGGTTTCGCTGTTTCCAAGAACAGTCCATTTGCTAGGCATTCCTGGAACTTGAAAGTATTGACGAACAACAGTGGGTCTCTTCTGAGGTCTCTTGGCCCCTTCATGGGCGTCACTGTACCCACACTGCATGTCGGTATGGTGTTCAGTGCTTGTTGCTGGTACAGGGATCCCCACAGCTTGCCTTGGATCGAATATCTACACACTGGAGGCAATAAGATTTGGTATGGCATTCCAAATTCAGTGGGAGATAGTTTCCAAAAGGCTCTCACAAAGTTGGTGCCGAATTATTGTAGAAATCAAGGAATTTGGTTGCCGTCAGATACTGTAATGCTACCTCCTAGTCTTCTTATAGAATCTGGTGTTTCACTGAGTCGAATCGTGCAAGAACCTGGAGAATTCATTGTAGTGTTCCCTAAGGCTTTTACATCGAGCATCAGTACTGGCTACGTTGTTTCGGAAAGTGTCTTCTTCGCTCCTCCGTCTTGGTTAAGAACGGCTCAAGTAACATTCGACTTACTGAAAAACAGCTGTGAGCCTTCAATGTTCTCTTTGGATAGGTTATACCTAAGTATTATCAACGATCAAAGAACAAACGTTGAAGTTTTGAAACAGATGATACCGATAATTTCCTCTATCCACTCCAGAGAAAAGCAAAAGAGGGAAAAACTGAAGTCTTTAGGGGTGAATGCTACAGAGGTTCTTCCTCATCCTGAAGCCTCTAACttgaagagaaagaagaaaTCCCAAGATGGAGGTGATTACGAATGTGAAGTATGCAGAACCAATCTATTCATTTCATCGGTTATAGAAAAGCAAGAAAACGCAAACTATTGTCTCGACCACGCCATAgaacaaatcgaaaaaaaatctatccagCCGGACAACTGTAAACTTTTATATACATATAGCGAAAATGATCTCGAAGGATTGATTTCTAAGATAAATATGTCGATAGAACAGAAATTGCAAAAAAAGGTATTCAATAAATTCAGTGGGTTGCCAACTTTATTGAACAAGTAG
Protein Sequence
MKRKRRDLCPSPLLDEEPKRTKVHAQRKFAQGSNVNSPVITPVKDFERNDRSNLDLIPEPVELLPIRRQNTEDFLTFLCFRGTPILPPNLNFFNTASIVDTNGQVHEIKSESPKNGPIDTSVIPKSGSGPSDRPFIAFGVRKRADPIVISKQMERKRRHALALQALRRKYQEQKMAKIRAVTISKLSEKPSNRATVRTNALLKLEKAPQPVTTTKPVSQKNKVKIISSKAVNAQTLRNINTKIKPRMCLRSFRGRFVQQELPFRAVKNSKLPDKKGVTIKKKMEIKKNIKTPMKVISKKEISAGKKGQGNVQKIPKKIKAEDNEEASVKRSSKVPVKAKLNVKKLIKRRILIPSASLVKSRVLRSQTVKSCKTSQSRLTRSGINRNLKKSAGETDKKIDTDQKPKQSKKTKEISQQTSTIYSKRNEKLGVCNPEEPNNKISKMVKTSARVLRNDLSSSISKNTSNKSEVSKTDDFPDKKESGNIKQKKETKSESKKGKKTIVKAKEIEGKADTENINLALLITEENADKKGGTKKNITTHRSVEDKSNKNKAFKLEPSENEQKSSQRPSRKTKEAAAIYMEILSHKLEHDNKVDDDTISIDSFPELPNVKRTEQRENELKAKANISKTGKSKSKLEKLAEQEETDSSSDDDKNLKNNEIHSIKRKEVSVIVDTELKKKNMKQKSTKKNKTLGHVEKIPSEKFNEKILTSKEHKEKNEKKRVQSEMKFQNERVELKKIKLEKNIINPKNNIKAEASEDEEPLKLMAVSKKEILKIVKVEISEENEKIKDAMCLNIKEGGTKQSKIKLEKTGTETKKAKITEKQCKKIENEKFFPVEKNVSFKNTATFEQKIYKKLNSKDSSDSDECLAKIPKISKMVTDSKNKLLHTKQDSVSQNLMEKKSQTKPTENISSDSENECLAKIRKIQGVKVKEHTDKRQTRRSCQQNKRIECDDSEDSFHLEVKIPRKKLLTRSKSSKISSTSKTKSNLDLSSAQSNASSISCLSVSQKYAKNKKGLKVEVDFSDSDEEPLSKLTVNKQTDKNSTEELKEVILRKQKALIESLPRNKGKKNKEKESVNKEKPEDPPIKLKRECAKIPSNYLPMFSSSDDDEKFFHGFSPKNEKKKESIYSHSSLDFLSKDLGRRFGKEKVNMSNEQIEKWLKDSAMAGDANKKNEELKYCEEIPMETSLNKLNSINTQQLKNPLSEPTGSLGSKDITPEKKNHSCDDNLKSPMYKSPDRKPIFRKEKAKVAPTVGAFSVNNESSIYAFEEEIEEAVSTPFRRPSRRPSSTATSKSEDELVKSEDQLKFGQFRKPTLKNETNKHEEQKLKETEITLKQGTSSQKLAQKTSVTRNILGKPIKRNNSEHFDDFKYKVPSSPSASSSSSVKLYKNQNKNKSKPVEDCNPVNMADFPCNGPGELVEAPTFYPTEREFQDPLEYIEKIGIRAEQFGICKIVPPNTFKPECKVSDDMRFTSYNQYVHKMLHRWGPNMKELMAIKKYLQTQNINLKQPPWIGGMEVDLPRLYQTVQSLGGLKEVIEKEKWSKVSDIMRIPKSAQDRVTKLDDIYCKYLLPYDTLSPDERDKLLDEVETAWAKRESKNLSKMQKSVDGVEAENESDSESDDEVEECITKGRNMALNAFYRIARNTMSMWFKSSAPSVQDIEQEFWKHVVHRENHICVHSGSIDSGSCGYGFAVSKNSPFARHSWNLKVLTNNSGSLLRSLGPFMGVTVPTLHVGMVFSACCWYRDPHSLPWIEYLHTGGNKIWYGIPNSVGDSFQKALTKLVPNYCRNQGIWLPSDTVMLPPSLLIESGVSLSRIVQEPGEFIVVFPKAFTSSISTGYVVSESVFFAPPSWLRTAQVTFDLLKNSCEPSMFSLDRLYLSIINDQRTNVEVLKQMIPIISSIHSREKQKREKLKSLGVNATEVLPHPEASNLKRKKKSQDGGDYECEVCRTNLFISSVIEKQENANYCLDHAIEQIEKKSIQPDNCKLLYTYSENDLEGLISKINMSIEQKLQKKVFNKFSGLPTLLNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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