Basic Information

Gene Symbol
Ncor2
Assembly
GCA_003063815.1
Location
NJRL01000024.1:931982-939347[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-15 1.6e-12 47.7 0.4 3 45 169 211 167 212 0.95

Sequence Information

Coding Sequence
ATGGAGAGATTGGAGAACACCAAAGTACTCGCGAGGATCAAACGTTTCAGTTTGAGCGTTAAATTGAAGCAGAGTGGCAGGCAGTTAGGACTTCACTCTTGCTCGGTGTGCCTAGTCGTCGTCGAGGGAAGCGCGCATAGCCGCGTGTTACCGCGTAGCCAAGCGTCGCTGTACGGCCTGCGAGAGGACCAACTTTCGGTTAATGCGCGCGTCTGCAACACCTGCCGCTGCAAGGCCGTCCGAGGACGTTACACCGCCTGCCCGCTGCCAGGCTGTCCGAATCTGAGCAGCTCCAAGTCGAGAGTGAAGCGGCTGAGAGCGTTGCCCTCCAAGTGGCTCGACCTGCCACCGGAGATCCGGGAGCCAATCGCTCAAGAATTCCAAATACCGAACAGCGCGACGAAATGCTGCTCGGCATGCTTCAGCCGCATATCGCGCCGTTTGGCGCCGCATCTCGCCGGTGGAACCGAAGTGTCTGAGGATGGTACCGATGCGTTATCGCGCCAGTGGACGGACGAGGAGCTCGAACAGCTCCGCAGGGCACTTCGGGAACACGGCACCAATTGGCCAAAGGTTGCCGAGCAGATACCCGGCAAGACGAATCATCAATGCAAAAACTATTACTTTGCTTATCGAAAGAAATTGAGTCTCGATCAGGTCGTGGCTGAGTACTATGCTTCGTTGGGCGAAGAACGGAGACCGTGTCTAACTGATGAGGAAGAAAGCGGCAGTAGCACTAGCAGCTGCGATGAATTAGCTGTTCACGATTCGAGTGACACAGCTAGTGCAGGAAGCCCGGCAACGACTATGACGGGCAGTAATGCGACGTCGGGTGGTACTGCGGCGACGTCGTCGTCATTACCAATGTCTTTCCAACGATCCACCGAGCAGAAACTCGGTGAGAAACTCTCGGAAATAGCCGTGGTATCAATCGTGCCACCCGGATCGTCTCATCAGTCTTCCAACAGTGGCACTACTACCGCTACATCCGGTGGTACTAGAGAAGATTACGATAGTTCTGCCACGGAGACAGCGGACGAAGGTCAGGGAGGTGCTGACTTAGATAATGGCAGTGTTGTGGTGACTCTGACAACCTCTAGCAGTAATACGACATCGTTGCAGCAACAGAGTCAACAGCAACAACATCCACAGCCACCACCAATTGTTCATTCGCCACCTTCAACAACGAGTAATTCCAATCCGCTCACTGTCAAGGATCTCATGCTTGGGGTTATCGAAATGCAACTAAAACGTACCCCCAACAGTCAAACCGACGGTAGTGCATCAGCACCTGGCACCAGCTCTAGCACTCCGACGATATCTAGTATTTTGAAGACAGATCATCGAAACGACATAACATATGTTCGTGGCTATAAATCGTCATCAAACATGGCGAACACTTTGTCTAATAGAGATACGAATCTAGCAACGCTCTCCGTTGTCTCGGGACCTCATCATGCTCACCGTTCTGCTCCCAGTCCGCAACAAATTGGTCAGATGCAGGCTACCATTACTCCTTGTCCACCAGCTGTGCCGAGTAGTCAAGCTTCGTCGTCAGATCTGCTGCCCAAGGAAGGTTTGGTCGTCATGCAAGTACAACAAGCGCTTCGAGAAACGGAAGGAACGTTGGATTTGAGTATTAAAAAACCAAGACTACAACAAGACTACAATCATTCGATGCAGCTTCACAAACCGCCGACGGTCACGCTCTATCGACCGGAACCGCCACCGGGCGCGTATTATCATCCTCACGCGCCTCATCCTGAGCAAGGACGTGGCGCAAAGAGTCCATGTATTTATAGTTCGTCACCGCGACCGCAGGCACCCATTACACCTAAGATGAACAAAGTCACCGTACCACCGCCTCATCCCAAACTGTCTCCGAAACTGAGCAGCATGGGCACGCCGGGTCACAAAGGTGGCTCTATCACGCATGGCACGCCTGTATCCACAGCGCGTTACGAAGGTCTATTGCGGCAAATGACGCCACCCGGTAATCCGACGGTCACTGGGGCTGCTCCGAATGCTAGCGAACGAGGTAGCGGCGGTGCCGTAAACGCTGGCTCCGCTGTCCCAGGGGCGCCGAAAGATACAGGTGGTTCGATCACTCAAGGTACACCGGTGCTTCCGTTTGCAGTAGACAAACGTGGCACGCCCATGTATGATTATCATCGCACTATCCGACATTCGCCTGTCACGGGCGGCGGCAACGTTCCACCGCCACCGCCGGGACAGGGTCCCACAAGTCAGGCGGCATCACCGGCCGTAGTAGTAAGCCACGGCGGCAGCCAGTACAATTCTTATTCCACCGCCGGGCGGCCACCACCCAGTTACTCGATGGAACAACAGTTATCCAGCCGGCAAATCATCATGAACGATTATATTACAAGTCAGCAGATGCATGCGCGCGCTCGTGGTGGCAGTAGTGCCGGTGCATCTGTCGTTACTGAGACGACCGGTAAGAGCGAACCGCCTCCGCCACCGTCCAATCTCTACTATGCCAGCACGCCTCCCCCATCACAGACACACACGCAACCGCGGCAAGGCGTCATCCAGAGGCATAATCCGCAGAAGCAAATGCACTATCCGCCACCGCCACCTGGTCTGGAGGCATTTTCCAGTTTAGTAGATGTGGCAGTACAGCAACCCAGTCTTCCGGTACCACATCCACACGGCCATCCAGCTGCATCCGGTAGCGGTGGTCACGAAGGACTCGGTAAAACGATGGCGGATCGTCTATTGGCCGACCGTTACGACAATAACCGGGCGTTTCGCGAACAAGAAATGCGGCTACAGGAACATCGTATGGTGGCAATGCAGCATGCAGAACACAGACTAGCAGTGGCTGCGGCGGTGCAGCATCAACGCGACCGAGATAGAGAACGCGACCTTGTTCATTTGCGGGAAAAGGAGGAGCATCGTTTGCATCGTGAAAAAGAATTGCAACAGCTGGAGCACCGTCTTGCGGTACAGCAGCATCATCAGCAACGTGAAAAGGATCTCCAACAAGAACACCGTCTCGCACAGCAGCGTGAGAAAGAGATGCATGTCGAACACGCTCGTCTGTCCGTGCAGCAAGTCCGAGAAAAGGATATCCAACATGAGCATCGACTTAGTGTACATCAGCAGCGTGAGAAGGAGATACAACAAATGGTGGCAGCTGCCGCACAACGCGAGAAGGAGCATGAGCATCGACTGGCTGTGCAGCAGCAACGCGAGAAGGAGATGCAGCAACAGGAGCGGCTCGCCATTCAACAGCAACGTGAGAAGGAGCATGCCGAACATCGGTTGGCCGTGCAGCAAGCGCATCGCGAACGAGATCTAGCGCATCTCcatcaacaacagcagcagcagcaacaacagcagatTCAACAGCATATTCAGCAGCAACGAGCTATAGAAGCCGAGAGAAGACACAGCTATACAGTTGCGCAAATATACAGAGATCACCAACAACAGCAACTCGATAGAGATTCGTCAAGACTATTAAACAGTGGATTCTCGCAGTCCTCCAGGCTTCAGCAATCTCAGCAGTCTCAACAGCAGCAGTCATcctcatcatcgtcatcatcgcgACAGAGTCAATCCTCCAGTCAACAGCAGAACGATTCGACGAACACTCTCACAGCCGCCAGCCTGATTGACGCTATCATCACCCATCAGATCAATCAGAGTGTCGAGAATGTCAATGCAAGCGGGTCCTTGACCAATCAGCCAGCACGTGCTGGCGATCGTCTGTTTCAGGGATTTCATCGCGAAAGTCAGCAAGAACCTAATGGCATAGCCCATAGTCCCGCCGGTGAAGGCAGCGGTGGTGGAAGTGGTGGAAGCGGCAACGGAAGTAGCGGCAATAAAGCAATTACTCTCGGCGAGCATGTTGATCATATTGTCTCTAAAGATTATGGCCCGCCTCATTCATCATACAGATCTTACACCGGatatCAAATTTCCGAGGATCAATGGAAGAGACGAAAACTTAATGAACCGGACTCGGTGAAGACTGGGGACGAGCGTCAAATAATACGTGTCGCACAACAGCAGCAGacacagcagcaacagcagcatcaGTCATCGGGAAAGCAGCAATACCATTCGGTTGAGCCGGTTTCGCCGCCGGAGGCAACTACCAATCATTACGGACGTCGCTTCTACGAATCGAGCACTGCCACATCCACTTCCGGAACTCCCTCCAACAAGCCGCATCAGATATCGCCGTTCGATTACGTGAAGAACAAGATCGTCGAGGTGATGCGCACTGAGGACGACAAAgccggcggtggcggcggcgatggTAGTGCGGGCCCTGATAGAAATGGAGGCGGTAATTCCGTCGTCGTGTCTGAGAAGGATGAAAAGGGAGCCAGTGCGGGAAGCATAGAGAGGAGTCCATCGAGTGGTGGTGGTGGCAGCGGAAGCGGCGGTAACGGCGGCAACAGTGGAAGCAACGAGATGGTGGTCGACGATGCGGGTGGACCGAATCCAAGCGCTCGTGAACAACCACCGCCGCCTGCACCCGCAGCTACCACCACATTCTATCCGTTTAGCGCGTTAGGGGTACACACGGGACCACCGCCGGCCCCTCCACCCGCCACAGCCACATCCGCCTCCGTGACGAAATCGGAACAGATGCAGGCCGAACCGGCGCCGCTGCTCTCTTCGCAATACGAGCCGCTCTCGGACGAGGATTGA
Protein Sequence
MERLENTKVLARIKRFSLSVKLKQSGRQLGLHSCSVCLVVVEGSAHSRVLPRSQASLYGLREDQLSVNARVCNTCRCKAVRGRYTACPLPGCPNLSSSKSRVKRLRALPSKWLDLPPEIREPIAQEFQIPNSATKCCSACFSRISRRLAPHLAGGTEVSEDGTDALSRQWTDEELEQLRRALREHGTNWPKVAEQIPGKTNHQCKNYYFAYRKKLSLDQVVAEYYASLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPATTMTGSNATSGGTAATSSSLPMSFQRSTEQKLGEKLSEIAVVSIVPPGSSHQSSNSGTTTATSGGTREDYDSSATETADEGQGGADLDNGSVVVTLTTSSSNTTSLQQQSQQQQHPQPPPIVHSPPSTTSNSNPLTVKDLMLGVIEMQLKRTPNSQTDGSASAPGTSSSTPTISSILKTDHRNDITYVRGYKSSSNMANTLSNRDTNLATLSVVSGPHHAHRSAPSPQQIGQMQATITPCPPAVPSSQASSSDLLPKEGLVVMQVQQALRETEGTLDLSIKKPRLQQDYNHSMQLHKPPTVTLYRPEPPPGAYYHPHAPHPEQGRGAKSPCIYSSSPRPQAPITPKMNKVTVPPPHPKLSPKLSSMGTPGHKGGSITHGTPVSTARYEGLLRQMTPPGNPTVTGAAPNASERGSGGAVNAGSAVPGAPKDTGGSITQGTPVLPFAVDKRGTPMYDYHRTIRHSPVTGGGNVPPPPPGQGPTSQAASPAVVVSHGGSQYNSYSTAGRPPPSYSMEQQLSSRQIIMNDYITSQQMHARARGGSSAGASVVTETTGKSEPPPPPSNLYYASTPPPSQTHTQPRQGVIQRHNPQKQMHYPPPPPGLEAFSSLVDVAVQQPSLPVPHPHGHPAASGSGGHEGLGKTMADRLLADRYDNNRAFREQEMRLQEHRMVAMQHAEHRLAVAAAVQHQRDRDRERDLVHLREKEEHRLHREKELQQLEHRLAVQQHHQQREKDLQQEHRLAQQREKEMHVEHARLSVQQVREKDIQHEHRLSVHQQREKEIQQMVAAAAQREKEHEHRLAVQQQREKEMQQQERLAIQQQREKEHAEHRLAVQQAHRERDLAHLHQQQQQQQQQQIQQHIQQQRAIEAERRHSYTVAQIYRDHQQQQLDRDSSRLLNSGFSQSSRLQQSQQSQQQQSSSSSSSSRQSQSSSQQQNDSTNTLTAASLIDAIITHQINQSVENVNASGSLTNQPARAGDRLFQGFHRESQQEPNGIAHSPAGEGSGGGSGGSGNGSSGNKAITLGEHVDHIVSKDYGPPHSSYRSYTGYQISEDQWKRRKLNEPDSVKTGDERQIIRVAQQQQTQQQQQHQSSGKQQYHSVEPVSPPEATTNHYGRRFYESSTATSTSGTPSNKPHQISPFDYVKNKIVEVMRTEDDKAGGGGGDGSAGPDRNGGGNSVVVSEKDEKGASAGSIERSPSSGGGGSGSGGNGGNSGSNEMVVDDAGGPNPSAREQPPPPAPAATTTFYPFSALGVHTGPPPAPPPATATSASVTKSEQMQAEPAPLLSSQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01408126;
90% Identity
iTF_00128134;
80% Identity
iTF_00128905;