Arud003701.1
Basic Information
- Insect
- Aphaenogaster rudis
- Gene Symbol
- cdc5l
- Assembly
- GCA_003063815.1
- Location
- NJRL01001514.1:10193-12976[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 3.6 5.5e+03 -2.0 0.0 3 17 161 175 159 176 0.88 2 5 6.7e-13 1e-09 38.8 0.5 1 45 256 302 256 303 0.95 3 5 1.5e-08 2.3e-05 24.8 0.7 3 42 311 354 310 358 0.94 4 5 2.6e-09 3.9e-06 27.3 0.0 1 45 364 409 364 410 0.95 5 5 8.9e-13 1.4e-09 38.4 0.1 4 44 421 461 419 463 0.94
Sequence Information
- Coding Sequence
- ATGAGCGAATCTGATGACTCGGATATCCTAGCTGATATCCAGGCTTTGGATGAAGCTTTAGCCTTGAccgcgaaaaaaaattctcagCAATATGCTAGCAGCAGCCAACAATCTGACGTCTCGTCGGATGCCGAGTCTGAGGATAATGATGACTGTATTGATTATCTCAGTACAAATCAGGATATCGACGAGTCTCTGAACGCTTACGAGATTAATACAAAGTTGATCACGGGCTTGACGATAGCCAAGAAGAAATTGACTGCTCTGCTGGAAGAATGCAATGAGAAGATAAAGCTACTGGACGAGAAGATAATGAAATCCAGGGAGAATGAGAGTAGCTCAGGTTCCAAATTGGCAATCAGCAACGCTGGTATGCCATACTTTAAGGACAAGAATTTGTTCAGTGCTCCCAAGAACAATGACACTAAGCTGAAGGAAGCCCGTGGTGAGTTGCTCCTTTTGTCTTTGAAAAAGCCAAGTCGCTGGACAGGAAAAGACAGAGAGACGCTTTTAAGCGCGATAAACAACCAAGCTATCGAATCGGTACTGTCTGGTGAGTTCAGCAAAACAATTGATGAGTCTACATCTGACAATCCAGATAAGAAAACTGAATTCGTGCTCCCcagaaattttaatgaaatggtAGGAGCGGTGGGTGAGAAAGAGTTTGATTGGCATAAGATTTCTGTTATCGATTTCGATACTAAACACACACCATGCGAATGCCGAGCTATGTGGAATATCTATCTGCATCCCAGTTTCAGGAAAAGTGAATGGACAAACGAAGAGGATAATAAACTGCTGAGGTATGCGAAagcatataaatatcaaaattgggACGCTATTACGGAAAAACTAGGGACAAACCGTAGCGCATACCAATGTTTCATCAGATATAATACCATTAAGAAAATGCCAGCAACCGGGCATCCTTGGACCAAGCAGGAGGACAATCATCttgtgaaaattataaacaCACTGAAGATCGGAGATTACATTCCCTGGACCGAAATCGCTAATCACATGCGCCACAGAACCAAGCAACAAACTTACATACGATGGACGTATAGAAAAGCACCGCATCTGAGAAAAGGTAGATTCACTAATCCGGAATCGTCAACTCTCATGAAAGCGGTGCAGAAATATGGCACGAACTTCTGTAAAATTTCAAGCGCCGTAATGCCACATCGAACTTCGATACAACTCCAGCAGCATTACAACACGATGATGGAAAAAGTCAGTAGCGATCCTTTGAATCTGTGGACATTAAACAATGATGTGACATTAATTAATCTCTATATGAAATACAATAACAATTGGTCCAAGATAGCCACGCATTTTCCTAGCAAGACAAGAACGCAAGTGAGACATCGATATAACGCACTATTAAGATATGTACTGAAAGGTGTCAGTCTCGAACATATACCTAGACCGGCCTCAATTTCCAAGAAAAAAGCTTTACTTAAGaagaaattatctaataaaaaattcttaaaagattataataaaactatgTCATGTGTGAAGGAAGTGCATCATCCTATACATGTTTTTGATATTCAGTTAAGATTATATGAAACTCTTTGTTTCCCACTTTCAATCAAATTTAATGATTCTGAAGAAGAAGCTTATGGCACCAAACAACTTGCACATgatactaaaaaattatataacacattGGATTTGTTGAACGCCAATCTTGATATTCCATATGATTTTCTGaattatgtacaattaaatgacaaagagaaacaatttttggtttctttaaaagaatacataaacgtaagaaaaaacaaaatacagaataatgaattaatagaaaaatttagaaCGCAAATGTTTGGTTCCATTCCAGAAGTTAGTGaaagtgatttttttatacCACCACTTCCGTTTGATGGATATGTAAAGcctaaaaaaatgaaaactcgAACGAACACGTCTATAGACTACGGTTTAGATGTCAACGAAAGAGAACTTCTTGTTGATGTGCCTATAGATTTCTCTATAACTTCCTGTATACTTCCTTTTATTAGTATTGAGGAAGAATTTCAATTTCACAGACTTAGTCAGTTGTTAATAAATGATTACCATAATCATGAtcaacaaaatatacatttgtatgaatcattaaaatgcatcttgtcttttaataaagaaactttAAGTGAAACTTCATCACAACATAATATGACTTCAAAAACAAGTTTGGAAGACGAACAAGTGGAACAATCAAATTTAAAGGAAACTATCAGTATTAATGAAAACGATGAAGAAacgaatatgtataatataattctgccaaatcaagaaactttattagGTTTGAAAAACTTGCTTGTTTGGAAATTACTGTATGATTATCAACATGAATCTCGTCAACAATGTGAATCGTTGGCGTCATTTGAAAATAAGCGAAAACCAAAACAAACTGTGACAAATTCTCGACTGCAAACGGAAAGTGCTGAATACCAGCTACTGCGAACTCGCCTACTGCAATTATTTAAACTTCCCATAAGTTTGTCGAACACCATAATGGAAATATCCGGGCCAGAAACAATATTTTCAAGACAAGAGCGACTGACCCATCAAAATAATCAAAGtatttcaaagaaaagaaaatttgaagATACCAAGCCTGTGCaaccaaataaaaaaagaagctcCATCATTGCGATTAATAGCATTCCTCAAATCAGCTCAGATGTTACAACGGTAAACCTTCCTGTAGTACGTAGCTGCACAACAATtgacaaaaagtatataatcgTCAAAAAATAA
- Protein Sequence
- MSESDDSDILADIQALDEALALTAKKNSQQYASSSQQSDVSSDAESEDNDDCIDYLSTNQDIDESLNAYEINTKLITGLTIAKKKLTALLEECNEKIKLLDEKIMKSRENESSSGSKLAISNAGMPYFKDKNLFSAPKNNDTKLKEARGELLLLSLKKPSRWTGKDRETLLSAINNQAIESVLSGEFSKTIDESTSDNPDKKTEFVLPRNFNEMVGAVGEKEFDWHKISVIDFDTKHTPCECRAMWNIYLHPSFRKSEWTNEEDNKLLRYAKAYKYQNWDAITEKLGTNRSAYQCFIRYNTIKKMPATGHPWTKQEDNHLVKIINTLKIGDYIPWTEIANHMRHRTKQQTYIRWTYRKAPHLRKGRFTNPESSTLMKAVQKYGTNFCKISSAVMPHRTSIQLQQHYNTMMEKVSSDPLNLWTLNNDVTLINLYMKYNNNWSKIATHFPSKTRTQVRHRYNALLRYVLKGVSLEHIPRPASISKKKALLKKKLSNKKFLKDYNKTMSCVKEVHHPIHVFDIQLRLYETLCFPLSIKFNDSEEEAYGTKQLAHDTKKLYNTLDLLNANLDIPYDFLNYVQLNDKEKQFLVSLKEYINVRKNKIQNNELIEKFRTQMFGSIPEVSESDFFIPPLPFDGYVKPKKMKTRTNTSIDYGLDVNERELLVDVPIDFSITSCILPFISIEEEFQFHRLSQLLINDYHNHDQQNIHLYESLKCILSFNKETLSETSSQHNMTSKTSLEDEQVEQSNLKETISINENDEETNMYNIILPNQETLLGLKNLLVWKLLYDYQHESRQQCESLASFENKRKPKQTVTNSRLQTESAEYQLLRTRLLQLFKLPISLSNTIMEISGPETIFSRQERLTHQNNQSISKKRKFEDTKPVQPNKKRSSIIAINSIPQISSDVTTVNLPVVRSCTTIDKKYIIVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00128129;
- 90% Identity
- iTF_00128129;
- 80% Identity
- -