Basic Information

Insect: Aphaenogaster rudis
Gene Symbol: lov
Assembly: GCA_003063815.1
Location: NJRL01000335.1:288833-290743[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.5e-15 5.6e-12 45.6 0.0 1 44 424 467 424 468 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.5e-15	5.6e-12	45.6	0.0	1	44	424	467	424	468	0.95

Sequence Information

Coding Sequence: ATGAAGGCCGCGGAGTGTCTGCAGGTGCGTGGGCTGTCGTCATCGGAGCCTAGGCCGGTATCGACGGAACCCAGACCATCGTCATTGGCGTCAACGCCGACGCGCGATATCATTCTGGCCGAGTTACCAACGCCGGAGGTCGCGCGACACGGAACACCCGAGGAGGACGAAAACGCATTGGAGAGCATGAGGGAGATGAAATCCATCCTGTTTCCACCAACGAGGGACCATCCGGCCAAGCCGCTCATTGGCCACGTGAACTTTGGTATTCGCGAGAGTTGCGGCTCGCCGTCCATGCCACGGCGGAAACAGGCGCGTCCGCGCCGACGATCCGGCGAATTGTTGCCGCAAGATCTGAGCAGACGCTCGACCCCGCCGGTCAGCTCGAGTCCGCTGCCAAGCATTCTTAATCTCAGCGGTGGTCAGCATCAGGCGCAGCAACAGCATCAGCAGCAGCTATTGCTGCAGCAATCCCACTATCAACAACAATCGATTAACAACGCACAGAACCAACAGCAGCAACAGGAAGACATGGCTGAGAATCTCTCGATGAAGAAACCGATATCGCCAGGCGGACTAGACCAGCACCACGTGAAGACGGAGGGTAGCGAAGCGACGAGCAGTCCTCGCGGCTCGCCGCTCACAGGAACGAGTCTGCTACATCATCCGGATGGTCCTGTATCGGACATCCCGGCGACCGTAGCGGCGGCCGTAGCGGCGACTGTAGCATTGTCGCTACCAACAATGCCAACGTTGTCACTAACGCAACCGCATCCTCCCGAGTACCTGACAAGTCTCGGCCAGCTAACGAGCCAATGGCTGCCCGGACATCCGCAGAGTCaactgccaccgccgccgcctcaAAGCCATCATCCACGCGAGAACAGTCCGCACGGCTCTGGTAGATCTCATCCGtatcagcaacagcagcaacaggaATCGGCGCTGCCACGACGTAGCGCTATGGCGATGTTCACGCCGACGTTGGACGGCGTGACGGCTCTAGGCGGTGGTCTTTTCTCTCATGCCACGTATGACAGAAACAGTCTCCTCGCAGATTCTCTTCTCGCGGATAATTTCAAGCCAGAGGCATTGCAAAATCTCTTTAGTACCTCCAGCCTTGGTCCTCCGCCCACCAAAAAGGCGAAAAAACATCGTAGTGATGGTGACGCACCACGTAGATGGACCGATCACAACACTCGAGCACTCGCGGTTAATAGGCCCAAGGGGCAACACAGCGCTCCGCGAGGAGGACCACCAAGGTCATGGACGAATAACGAGCTTACGATGGCTTTGCAACATGTCTGGGAAAAAAAACTAACCACGTCGCAGGCTTCTCGTATGTTTGGTATTCCCTACAATAGTTTGCTGATGTATGTGCGTGGTAAATACGGAAAGAGTCTAAAGCTTGAGCAGTTACGTAGGGACTGTACCGGCGCCAATACCCCTGAGATTATGAACAACAATAACATCAAGCCCGTCCAGCAGTCCGCGCAGATGAGCCACGGGCTCACCGGTCTGCCATTACAGCATCCGGGGGACAACGGCGGCTACCCCCATCGCGGTCTACTCGGCGGCAACATGCCGCAGCCGCAGGGCTTCTATCCCGCCGATTATGCCACCGCGTCTTTCCCTCTGGCAGTGAATATGGTGCATATGTTACCCCCGAGCGAGCAGAAGACCTTCGAATCGTCCGCGAACCCGGGCGGCGACGTAGGCGGGAGTGGGTGCGTAGGAAGTGGGGGAGGGGACGGGAGCGGCAATAGTGGCGGTGGTGGCGACCTGATGAACTCGCAGACCAGCGAGACACCATCCCCCATCGTCGACCACCACCATCATCAGGAGTCGTCGATGCAGTCGCAACCAACGCAATCGGCGCCCGCGTTGCTGCAGCAGAACGGTTCCGATTAG
Protein Sequence: MKAAECLQVRGLSSSEPRPVSTEPRPSSLASTPTRDIILAELPTPEVARHGTPEEDENALESMREMKSILFPPTRDHPAKPLIGHVNFGIRESCGSPSMPRRKQARPRRRSGELLPQDLSRRSTPPVSSSPLPSILNLSGGQHQAQQQHQQQLLLQQSHYQQQSINNAQNQQQQQEDMAENLSMKKPISPGGLDQHHVKTEGSEATSSPRGSPLTGTSLLHHPDGPVSDIPATVAAAVAATVALSLPTMPTLSLTQPHPPEYLTSLGQLTSQWLPGHPQSQLPPPPPQSHHPRENSPHGSGRSHPYQQQQQQESALPRRSAMAMFTPTLDGVTALGGGLFSHATYDRNSLLADSLLADNFKPEALQNLFSTSSLGPPPTKKAKKHRSDGDAPRRWTDHNTRALAVNRPKGQHSAPRGGPPRSWTNNELTMALQHVWEKKLTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGANTPEIMNNNNIKPVQQSAQMSHGLTGLPLQHPGDNGGYPHRGLLGGNMPQPQGFYPADYATASFPLAVNMVHMLPPSEQKTFESSANPGGDVGGSGCVGSGGGDGSGNSGGGGDLMNSQTSETPSPIVDHHHHQESSMQSQPTQSAPALLQQNGSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01477024;
90% Identity: iTF_00765461;
80% Identity: iTF_00127364;