Basic Information

Insect: Aphaenogaster rudis
Gene Symbol: ct
Assembly: GCA_003063815.1
Location: NJRL01000397.1:206206-224693[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.7e-28 6.9e-24 84.1 0.0 2 72 469 540 468 545 0.95

2 3 1.3e-32 1.6e-28 98.9 0.0 3 77 878 953 876 955 0.96

3 3 5.5e-31 6.7e-27 93.7 0.0 3 75 1110 1183 1108 1187 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.7e-28	6.9e-24	84.1	2	72	469	540	468	545	0.95
2	3	1.3e-32	1.6e-28	98.9	3	77	878	953	876	955	0.96
3	3	5.5e-31	6.7e-27	93.7	3	75	1110	1183	1108	1187	0.95

Sequence Information

Coding Sequence: ATGGAAAAACAAGACGGTTCGGTCCCAGATAAACGATGCTCGAAGCGAATCGCGAAGGAGGGAGAGGAACTCATAAATATCAACCAGTTGGTTGAGGAGGTGTCCAGGCTACAACAGAGTCTGCAACGCCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGGCTCGAGGAGGAACTCGAAGTGCGCAGGCAACACATCAACAGACTGGAGAGCAAATTGGAACGGCAGAGGGATTATGATGATCTAAAGCGCGAAATCAGTGTACTGAGGTCAGTCGACCTTTCGCAGATACCAACTGGCGAACCTGGAAAGAGCTTAGAACATCTTCTTATGGAGCGTTTCAAGGCGCTCCAACAAGCCGAGAACCTGAAACCCTCCAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAACCACCGCCACCGCCTCCGACTGCTGCCTCCCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTCTTCCCGCCACCCCTCCAGAATGTCGAGACCTTCGGCTCGTTTCTCGGTGAAGAAATCGTCGCCAATTGGAGGCGGACGTTGGAAAGGTCTATCATGAaccaacaacagcaacagcagcagcagcagcatcaacagcagcagcagcagcagcagcagcaacaacaacagcagcagcagtcaCAGCCATCTCAATTAAGCCAGTTAACTCAACAACAACAATTGCAACAAGCCCAACCACACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCACCGGGTGCGGATCCGTCGTCCACTTCGAACACTCCGGTGAAATCGAACACACCAATCGGTACAACACCTCTGGGCAGTCTAGATGTCACTGAAAAAGCGCCAACGCCGGTATCGGGGCACGAAACGCCAGCACCTCCAACTCCATCCTCGACAACGGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCGATGGTGGAAACTAGTACTCCTTCGGCTTCCATCAATGGTAGCGGTCTCACGCCCGGCATACCGAGCGCACCGCCTCCGAAGAGTCCGCCTGATCAAGAATCATGtcacaacaataataatagccATCATCTGGCGAATAACAATATTGGCGGATTGAGCGTTCTCGATACACTGAAGAGTCCGTTTCGGTTTGACGATCGAGCGTATCCCTTCCGATTCGGTGACGAGTTCGGTGCCGCTGGTATGGCCGGTCGGCTGGGCGAATCCCTCATTCCAAAGGGCGATCCCATGGAGGCGAGACTTCAAGAAATGTTGCGTCATAATATGGACAAGTACGCCTCGCAGAATCTTGACACTCTTCACATAGCCAGGCGGGTGCGCGAGTTGTTGTCGATACACAATATCGGTCAGAGACTATTCGCCAAATACGTACTCGGGCTAAGTCAAGGCACGGTCAGCGAATTGCTTAGCAAACCCAAGCCTTGGGACAAGTTAACTGAAAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGTGACGAGAACGCCGTGCTGCTGCTCAAGTCCCTGATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGAATGCCAGCATTCGCACGTGGACCACAGGAAGGTGGTCCGCAGGAAATGAGTGACGAAAGATTGGCACATATTCTCTCGGAATCGAGCCATATGCAAATGAGAGGTGAGCACGAGGTATCGAACGACGCTGACAGCAAGAGTCCGAATAGAATCGGTTGTCCGAGTCCATTCAACAAAGACAGACTGGACAGCCAAAACAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTGGTGAGGATTTACCAAGAAGAATTGGCCAAGCTGATGGGCACGAGAGTGGAGAATCTTCGCCCGCGAGAGTTCCCTAGCGCGATTTTTCCACATTTTTTCAGTGGCACCCAGGGCGGTCTTCAAGGCATCGAGCGCACCCAAGAAGATATTCGAATGGCATTGGATGCTTATCACCGTGAACTCCAAAAATTAAATGCCGCACCTGGTCAGAATCCTTCGATGACCGGATTGCCAGGATTACCTGGATTACCAGGTTTGCTGGCACTTCAGCAACAAGCTCTTCAGCAACATCACTTAGCCGCGAACGGTGGCGGCGGTGTTCAGGACTTGAGTTTAGGCAAAGTGGATCCGcgcaataaaatgataaacggCGTGTcggaagaggagaaagaaaagatGGAAGAGGCGATGAGACATGCCGGAAGTGCATTCTCTTTGGTGAGGCCGAAGCAAGAATCGACGGGACCTCAATCAACGCCCGGTGGTTCTAGCGCAAGTTCGCCGCTTGGTAATTCTATTCTTCCCCCTGCGATGACACCCAACGAGGAGTTCTCCAGTGCGGCGGCAGCCAGCCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACTCCAACTCACCATGCAGCCAACCAAAGGCCGCTGAAAGCTGTACTTCCTCCGATCACGCAACAACAGTTTGATTTGTACAATAATCTCAACACTGAAGATATTGTGAAGAGGGTGAAGGAACAGCTGTCTCAGTATTCAATTTCGCAGCGGCTATTCGGCGAATCAGTGTTGGGTCTATCTCAGGGATCAGTGTCAGACCTCCTCGCGCGTCCAAAACCATGGCACATGCTGACCCAAAAGGGTCGTGAGCCCTTTATCCGGATGAAGATGTTCCTTGAAGATGACAACGCGGTGCACAAACTTGTCGCCAGCCAATACAAGATCGCACCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACACCTATGAAACCTATGCCGCCAACGAAACTCGTCCAAGAACAGCTTCAGAACGCAGCGAAGGCGCAAGCCGCCGCTCAAGCAGCTGCGCAAGCTGCGGCGGCACAACAGCATCAGCAGGAGAATCAGATGCAACTCGGCCCGCCACAGCAAAGTCCTCAGCATCCACAGCATCCGCAGCCGCCACCACCAATGATGTTGACTCCGCCCGGACCCCATCATCCTCATACTCAGCTCAGCATGCAAGAACTCCAAAAgaaacaacaacagcagcaacaacaaatGTCACTGCACTCTCCGCATCATCAGATGGCACCGTCGCCTCTTCGAAGTCTTCATCCGCACATTTCACCGAGCGTATACGAGATGGCCGCCCTTACGCAGGATCTCGACACACAGACAATCACTACAAAAATCAAGGAAGCCTTATTGGCTAACAACATTGGCCAGAAGATTTTCGGTGAAGCTGTCCTCGGTCTGTCGCAGGGCTCCGTCAGTGAGTTACTGAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGCCGAGAGCCTTTCATTAGGATGCAACTTTGGCTGTCAGACGCACACAACGTCGATCGACTGCAGGCGTTAAAGAATGAACGACGAGAAGCGAACAAGAGACGACGTAGCAGCGGTCCCGGTCATGACAACAGCTCCGACACTTCGAGTAACGACACTGCCGAGTTCTACCACGCGGCATCACCCGGCCCGGGACCCACTACCGGAAAGAAACAGCGCGTTCTTTTCTCAGAAGAGCAGAAGGAAGCCCTTAGACTCGCTTTCGCCTTGGATCCATATCCTAACGTGGCTACCATTGAATTCCTCGCCGGTGAACTCGCCCTGTCCTCGAGAACGATAACGAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAGACGCCGCATGGCCAACCGGAACCGCAGTCGCCGCGAGAACCCGGCCAACCGTTCGACCCTGTTCAATTTAGATTGCTATTGAACCAAAGACTGCTGGAGATTCAAAAGGAGAGACTGGGTCTAGGAAATGTACCTTTACCATACTCTCCGTATTTTAATCCCAACCTAGCGGCTCTGGTAGGTAACGCACTGAAAGAACAATGCTCCGGTCTTGACCTCTCGATGAATGCTCTGAAGAGGGAACCCAATCAAGAGTTCGAAGACGAAGACGTCGATGACGCGATGAGTAATCTAGGTAGTGAAGATTCGGAAGGTTCAGCCAGCAGTATAAAAAGGGAACCCACAGAAACGCCGACGGCGCCCACGACGGTTAGGTCTAACAGAAGAAAACCCGCGGCCCCGCAATGGGTAAATCCAGAATGGCAAGAACCAACGAGAGCGGGCGACGAAGTCATCATCAATGGTGTTTGCGTGATGCAGACGGATGATTATGGAGTGAAGAGAGAGGCCGAGGAAACCATAAGAGTCGAGCCGACACCGGTACAAGACCGATATGAAGAGGATGCGCAGAGCGATGTCTCTTCTGTGTCAGGCAACAATGGGGCCGATCGGGATAGCCCGCTTCCCAGTCCAAAGTCTGGTCAGAACAGTCCAACGACGTCGCTCAGACCGCCGTCGGCACAACAGACGCAACAGTCCACGGAGGAAAGTCCAAAGGACGTGGTGAAACACGAACCGGAGGAAACGTGGGATTACTAG
Protein Sequence: MEKQDGSVPDKRCSKRIAKEGEELININQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQHQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTPLGSLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPGIPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRAYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPAFARGPQEGGPQEMSDERLAHILSESSHMQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAIFPHFFSGTQGGLQGIERTQEDIRMALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHAANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSASSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRAGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPTTSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394913;
90% Identity: iTF_00982081;
80% Identity: iTF_00129614;