Arud008899.1
Basic Information
- Insect
- Aphaenogaster rudis
- Gene Symbol
- retn
- Assembly
- GCA_003063815.1
- Location
- NJRL01000562.1:40641-52469[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-15 5.1e-12 46.4 0.0 15 79 49 111 34 112 0.89
Sequence Information
- Coding Sequence
- ATGCGCGAGCAAAGGAACGACGACAGACTCGTCGTCGTTGCTGTCTTCTTCTTCGTGGTCGTCTCCGCTAGGAGCGTGGCGGAACAACCCGCGCGAAGAGCACGACTGTTCCGCGAAAAGACAGGATCTCTCGTAAAAGACAATACGTCTGGAACACCTATCAGTCGACTACCTATCATGGCAAAATCAGTATTGGATCTGTACGAACTTTACAAGTTAGTGGTATTGCGAGGTGGACTGGTCGAGGTAATCAACAAGAAGCTGTGGCAGGAAATTATCAAGGGCCTCCGATTGCCGGCAAGCATCACTTCCGCTGCGTTTACTTTGCGAACTCAGTAA
- Protein Sequence
- MREQRNDDRLVVVAVFFFVVVSARSVAEQPARRARLFREKTGSLVKDNTSGTPISRLPIMAKSVLDLYELYKLVVLRGGLVEVINKKLWQEIIKGLRLPASITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -