Arud019571.1
Basic Information
- Insect
- Aphaenogaster rudis
- Gene Symbol
- ATFC
- Assembly
- GCA_003063815.1
- Location
- NJRL01000405.1:55392-56650[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1 4.2e+03 -1.7 0.9 31 56 80 105 75 111 0.64 2 3 1.7 2.3e+03 -0.9 0.0 44 56 230 242 225 248 0.70 3 3 2e-14 2.7e-11 43.7 13.0 2 63 258 319 257 321 0.95
Sequence Information
- Coding Sequence
- ATGTCTAGATGCGTTGCATATTTGCCGCCGGTGCCGCGTTTCCAGAGGCACGCTAAGCTATTGCGTCTCACGTTATCCAATAACAATGCACATACCAGGAAATATAATATCGTCAAACCCTTCTCAGATTGGCTGGAGGAAAAAATAGAGCTGCCCATATTCGAACACATACCCATTCTCGAGAACAGCCAAAACAAACCGCCGCTGATCTACCCGATCGTGAAGGCAtcacaacagcagcagcaacaacaacaacagcatgACGACACGCAGACCCTCTTGCAAGAGTTCGAAACGGTTCTGGGTGACGTCGAAGCTTGCCATCAGATTATTCCGCCAACCAGTTCGACGCTTACTCCTCCGCAATCACCCTCGCATAAAGCGATCAATGTGGACACGCAGCTGCTGGTCACCCTGCAGCCCGTGCAACCGCTGTACGCCGGCAATCAATCGATATACAACATTGTTCCAACGGAAGATCCGCTGTACGTGAGCAATACGCCACCTCAATGGAACGCCGAAGACATATCACTAAGTCCACTCGGCGGGGATGTTGCGAACGAGTTGGCGGTGGTGGACGAATACGTTCGCTCGCATGCCAAGGATATACCGTCGCCCTCAAGCCCGTGCAGTTCCGGCGGCAGTTGCATCTCGGCCGACGATTCCACTGATGATCCCGATTGGAATCTTGAAACCGAGAGAAAAAGCCTTAAACAAACAGTTCACGACTCTTCGAAGTATCGCCATAAGCCGTACTCTCGATCGTCTCTTGAGGACAAGAAGGTACGGAAAAAAGAGCAAAATAAGAACGCGGCCACTCGTTACCGACAGAAAAAGAAACAAGAGGTCAAGGAGATACTGGTCGAAGAGAACGAACTAGCGGAACAAAACGAGAAGTTGAAAGACAAAATGAAAAGTCTTCAACAGGAGATAGGATATCTGAAGGGATTAATGAGGGATCTGTTCAAAGCCCAGGGTCTTCTTAAGTAA
- Protein Sequence
- MSRCVAYLPPVPRFQRHAKLLRLTLSNNNAHTRKYNIVKPFSDWLEEKIELPIFEHIPILENSQNKPPLIYPIVKASQQQQQQQQQHDDTQTLLQEFETVLGDVEACHQIIPPTSSTLTPPQSPSHKAINVDTQLLVTLQPVQPLYAGNQSIYNIVPTEDPLYVSNTPPQWNAEDISLSPLGGDVANELAVVDEYVRSHAKDIPSPSSPCSSGGSCISADDSTDDPDWNLETERKSLKQTVHDSSKYRHKPYSRSSLEDKKVRKKEQNKNAATRYRQKKKQEVKEILVEENELAEQNEKLKDKMKSLQQEIGYLKGLMRDLFKAQGLLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00127201;
- 90% Identity
- iTF_00126456;
- 80% Identity
- iTF_00127201;