Apic008188.1
Basic Information
- Insect
- Aphaenogaster picea
- Gene Symbol
- clz9
- Assembly
- GCA_003063865.1
- Location
- NJRM01003233.1:853-3409[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 1.9e-06 27.9 0.0 1 41 13 53 13 55 0.90
Sequence Information
- Coding Sequence
- ATGGCATCAAAGACcaaaaatgtgtataaaaaataCACTCCAGAGCATATGAAAAAAGCCCTAGACGACATTCACtcgaaaaaattatcaattcgTGCAGCCAGTAAGTTTTACAAGGTGCCTTTTACAACTCTACTAGCGAAACATCAGGGTAAATATCCGATAGATGCCAGACCAGGTCCTGCGACAATTCTCACTTCAGAAGAGGAAAATGCATTGGTTGAGTGGATTCTGCATATGAGTGTAACTGGCTTCTGCATTACAAAAGAACAGCTGTTGAACAGTGTCCAGAAACTAGTCAAAGATTTAAAACGAGAAACACCATTTACAGATGGTAGACCTTCAAAGCGATGGTACCAATCTTTTCTCAATCGTCATCCACAAGTGTCGCTGAAGTTAGCACAAAATTTATCCCTTAGGAGAGCTCAAGTGTCAGAGGAGGATATCCGTAAGTGGTTTCAAGGCATAAAGGTGTATttagaatctaaaaatttgctGAATATCAGTGGTTCGAGGGTGTTCAACTGTAATGAATCGGCTTTTTTACTGAATCCGAAATCTAAAAAAGTACTGGCATCCAAGAATCAGAAAACAGCTTACATTCGGATCACAACAGATGAGAAAGAATGTCTCACGGTTCTCATTACTGGCAATGCAGACGGACAACTCGCTCCTCCCATGGTCCTCTATGCCTACGAACGGATACCAGGTCCCATTGCTGCAGCAGCTCCAGCAGGATGGTCTCTTGGGCACTCGAAAAGTGGGTGGATGACCCAAGAGAGTTTTTACGAATACGTAACAAGTGTTTTTTACAAATGGTGCCTTGATAATCATTTGGAGTTTCCGGTAATTCTATTTGTCGATGGTCACCGTTCTCACTTGACACTTGCCCTCAGTAATTTCTGTGTCCAGCATAAAATTGAGTTAATTGCCTTATATCCAAATGCAACTCATGTCCTACAGCCAATGGATGTTGCGGTTTTTCGACCATTAAAGTTGAACTGGAGTAAGGTTGTTGCAACATGGAGAATGGAGCATGATGGAGTTTCAGTGGATAAAACGAGTTTTGCTCCTCTTCTCAATAAAGCTATCAGTATGCTAGATACAAAAAGAATACTTGGAAACAGATTCAAGGCTTGCGGGTTGTACCCCTTTTCACCAGATGCTGTGGATTATTCAAGGCTTCTCCATTCGAACGAAACTAGTATGAACCAATCTACGGAAAATAAAGAACTACAAGACAAAAAATCCTGTATACGGTTTATAGAAAAAAACATTCCTTCAAAGACTTTGCAATGTTTCAAGATGAATAAAACTGGAATCTGGACAGAAGAAATTCAAGATGAAAATCTATTCTACTTCTGGCTGAGAGCTAGTGAAGAAAACCACTCCACTCCAGAAAATGCATTGTTCAACAATGAAGTTGTTTCAGATGGGAAACCTATTGAGATTGATCAGAGAGTCACACAACCTTATTCGAGTGAAGAAAATCAGCATGCTTCTATTCGGGAACTACATTCAACCCAAAATTCATTAGTTGTTGGCGATGAGAATTTGAGCCCAAATGTGATGCCTGCGGAATCTTTGAATGTAGCAGAACAAATTCAAGGCAAAAATTCTGTTTCAATTGTAAACCCGGATGAAAAGGCTACCCATTCTCAATCTCCTAAGAAAGCGGATGAGCCGAAGGTACCATCTCCATTTAAGAGGTGTCTATTTTGGCCCGAACAAAAGCAGGaaataaaaaagaggaaaaaagttaaaataccTGCAGTGGCTACATCAGACGAATGGAGGGCATACCATCAAGATCTaatagagaagaagaaaaaagcagaagaagagaaaagacaTAGGATGGATTTAAAGTTGGAGaaactaaaaatcaaaaaagagaaagatgaggagaagaaaatgaaaaaacttgtaataaacaaaaattaa
- Protein Sequence
- MASKTKNVYKKYTPEHMKKALDDIHSKKLSIRAASKFYKVPFTTLLAKHQGKYPIDARPGPATILTSEEENALVEWILHMSVTGFCITKEQLLNSVQKLVKDLKRETPFTDGRPSKRWYQSFLNRHPQVSLKLAQNLSLRRAQVSEEDIRKWFQGIKVYLESKNLLNISGSRVFNCNESAFLLNPKSKKVLASKNQKTAYIRITTDEKECLTVLITGNADGQLAPPMVLYAYERIPGPIAAAAPAGWSLGHSKSGWMTQESFYEYVTSVFYKWCLDNHLEFPVILFVDGHRSHLTLALSNFCVQHKIELIALYPNATHVLQPMDVAVFRPLKLNWSKVVATWRMEHDGVSVDKTSFAPLLNKAISMLDTKRILGNRFKACGLYPFSPDAVDYSRLLHSNETSMNQSTENKELQDKKSCIRFIEKNIPSKTLQCFKMNKTGIWTEEIQDENLFYFWLRASEENHSTPENALFNNEVVSDGKPIEIDQRVTQPYSSEENQHASIRELHSTQNSLVVGDENLSPNVMPAESLNVAEQIQGKNSVSIVNPDEKATHSQSPKKADEPKVPSPFKRCLFWPEQKQEIKKRKKVKIPAVATSDEWRAYHQDLIEKKKKAEEEKRHRMDLKLEKLKIKKEKDEEKKMKKLVINKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00129661; iTF_00128122;
- 90% Identity
- iTF_00129661; iTF_00128122;
- 80% Identity
- iTF_00129661;