Amia002172.1
Basic Information
- Insect
- Aphaenogaster miamiana
- Gene Symbol
- CAMTA2
- Assembly
- GCA_003063725.1
- Location
- NJRN01000104.1:452375-461868[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-44 1e-39 135.3 1.1 9 116 18 123 15 123 0.97 2 2 1 2.5e+04 -5.5 2.6 23 38 277 292 268 306 0.57
Sequence Information
- Coding Sequence
- ATGACGCAACATGCACATTTCGCGTCTCTACTAGCCGTGCTACGCGTGCGATGTAAGGAAATCGCCGCCATCCTAATCAGTTTTCAGAGGCACGCCGAATGGCAAAGTCGGGAGGTAAAAGTAAGACCACGAAGTGGTTCAATGTTACTGTACTCGAGGAAGAAAGTACGCTACCGGCGGGACGGTTATTgttggaagaaaagaaaagatggaAAGACTACACGGGAGGATCACATGAAACTGAAGGTTCAGGGAGTCGAGTGCATCTACGGCTGTTACGTGCACTCGGCGATCCTTCCGACGTTTCATCGCCGGTGTTACTGGCTACTGCAGAATCCGGACGTTGTTCTCGTCCATTATTTGAACGTCCCTTATCCGGACGGTGATGCGAAGCTGGCGGCCTTGCCACCCTGCCTCGCGCTGCCGCCAGACAAGAAGGAGTGGACGCGAGACGAGCTAGCGTCGCAATTAAGGCCCATGTTCCTCGGTGGAGATGACGATCCGAACAATCCTCATCTCACGCAGCACTCGAACCATCCCGTCGACATGATAGTCTCTCAACTGCTCGATAGGCAGAGGGCATCCTCCACTACCTCCACTACCAGCACTCAACTCGCACCTAGGAGACTTACGCCCGACAATCAGGTCTCTTCAACAACGGGAGGTCAACAACAATCGACGACGGCGGCTCCGGCTCCCCGTGTGTATTCAAGACATTCCCATTCCACTCAGAGTCAACAGCCGGCTCCTCTAGTTTTAAGTTTGCAACAAATTCAAGGCGGTGGTGGTCTTCTGATACTCAACAGTCAACCATATCatcatcagcagcagcagcagcagcaacagcagcaacagcagcagccgccgcaacaacagcaacagcagcagccgcaacagcagcagcaacaacagcagcaacagagTCAGCAGGTGGAGATGCAACAGGTTACAGAACAACAAATTGTACCGCAGACCAGCGTCGACCGAGAACAACAAACGCAGCAAGAAATCGACGCGCAGGAAAGTATGGACAGGTCTGCCGTGCAATCTCTGCCGATCGGCGGTTCTGGATCCGAGGTGACCGATTTCGCGGAGACGCTGGATCTGAGTCAAGAAGACATTCAGAGGACACTGTCAGCCAACATGGTGCCTCCGTCGCCATCGCCTTCGCCGGCGGACAACAGCATGATCAATCCGATGGACTTTATCGACTCATCGGACGATGTGCTGGTCAATCTGGACGCCTTCGACGTATTCGGCGATTTGCCGGAACTGCATGACTTCGAGGCCGAGCAGACGAAGCACGAGGAACAGCGAGGTGGTCCCGAAAATGACGTTGGATGTCATCCTGGTACAACCGTCCATATTGCAGAATATAGTCCTGAGTGGAGTTACACCGAGGGTGGTGTAAAGGTATTAGTTGCTGGTCCGTGGACCGGCGGTAGTGGTTCTCAGTCGTATTCGGTACTTTTTGACGCGGAACCGGTTGAGGCGTGCCTCGTGCAACCAGGTGTACTGCGTTGTCGATGTCCCGCACACGCACCAGGAATAGCGTCCCTCCAGGTGGCCTGTGACGGTTTCGTCGTGTCCGATAGCGTTGCCTTCGAATATCGTAGAGCGCCGACGAGCGAACCTAGCCCAGAGAAAGCTCTGCTGGATCGTCTTGCGGACGTCGAGGCCCGTCTGCAGGGTCCCGGTCCGCCGTCTCCCGCAGCTCATCTGGAAGAGCGACTGGTTGCTTATTGCCAGGATGCTGTTGTCCGTCCTTGGCGAGCTGGAGCGGAACCTCTTCAATCCGGTGGGCCTACCCTCCTGCACTTGGCGGCCGGATTGGGATACTCCAGGTTAGCCTGTGCACTCCTTCACTGGAGAGCAGAAAATCCTAGTAGTGTTCTGGACGCCGAGGTCGATGCTCTTAGGCAAGATACCGCCGGCCTTACGCCACTTGCTTGGGCTTGTGCGGCAGGGCACGCCGATACCGCCAGAATTCTTTACAGATGGAATGCTATGGCACTACGCGTGAGGGACTGTCAGAATAGAACGGCGACTGAGCTGGCCGCGGAGAACGGTCACACGGCGATCGCCGAAGAACTGAATCAGCTCGAAACCCGAAGGCAAGACGAGAGGCTTTTCTTGCGACCCGCCAGCCCTAGCCCTAGGCGGCCATCTCAAGACAGCGGTCTCGATCTGGCGTTGTGTGGCTCGCCGCTGCTGGACAACATGGAATTGTTGCAAGAAGATGAGTCATCGTTAGGCCTCAGCGAACAGGGAATGGAGAGCGCTCCGACCCCTCAGGAGACCGTAGGGGAAGAAGACGCGAGGGTGCTGACATTGGCAGAGCAAATTATAGCGGCGCTACCGGAAAGGATCAAGAGGGCGGAGGGTGATTCTCTGTCTTCTTCCTCGCCACCACCACCTACGGCGCCTCTGTCACCCTTGGAGGACGCTCTCATGGAACAAATGCCTCTCGACTCCGGGGAACTGTTTGACTCGTATCGCGACTGCAACGGCGGCGCAGCTTCAGTTTCGGatgccgacgccgacgccaGTCCCTCGAGTCCTTCCAGCAGCTGCCTGACGCCGGACTCACCGTCCCCGCCGCCCACCACCGCCGATTTCTGCGAGTTTCtgcagctgcagctgcagcTCGACGGCAATGGTAACGCTCACAGCGGTCAGTACTACTCGTCGAATGGCGGCGGCGAGCGCAAGTTGAACGGCATGATCGGTTCCGGGGCCATGACGGCGGTCGGCGCCGGAAATGGCAACGGCGACGGAAGCGAGGCGGATCTGAGCAGACTGACGCTGTCCGATCGCGAACAGAGAGAGCTTTACCATGCCGCCCGGATGATCCAGAAGGCGTACAGGAATTACAAGGGTCGCCAGAGGCAGGAGGAGGCCGAGAGGCACGCCGCTGTTCTGATCCAACAGTATTATCGCCGTCACAAACAGTACGCTTATCACAGGCAAGCCACGAGGGCAGCGCTGGTGATCCAGAACAACTATCGAAATTATCGCGCGCGACCGGGCTCGGCCAGCGCGAGGCAGCAGGCGGTTCATCAGCAGGCGGCCCATCAGGCAGCGAGGAAGATCCAGCAGTTCATGCGGCAGTCCAAGATCAAACTGCAGAACGCCAAGGCCGTCGCAAACGGGAGCGGGAGGCCGCCAGCGGTCACTTCACGGGCGGCTGCTGTCCCCCAAAGCTCGCCCTCATCTAGCCCAGGGGCCAGCCTAGTAGCCGCCAGCCCGGGGGTCACCTAG
- Protein Sequence
- MTQHAHFASLLAVLRVRCKEIAAILISFQRHAEWQSREVKVRPRSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGVECIYGCYVHSAILPTFHRRCYWLLQNPDVVLVHYLNVPYPDGDAKLAALPPCLALPPDKKEWTRDELASQLRPMFLGGDDDPNNPHLTQHSNHPVDMIVSQLLDRQRASSTTSTTSTQLAPRRLTPDNQVSSTTGGQQQSTTAAPAPRVYSRHSHSTQSQQPAPLVLSLQQIQGGGGLLILNSQPYHHQQQQQQQQQQQQQPPQQQQQQQPQQQQQQQQQQSQQVEMQQVTEQQIVPQTSVDREQQTQQEIDAQESMDRSAVQSLPIGGSGSEVTDFAETLDLSQEDIQRTLSANMVPPSPSPSPADNSMINPMDFIDSSDDVLVNLDAFDVFGDLPELHDFEAEQTKHEEQRGGPENDVGCHPGTTVHIAEYSPEWSYTEGGVKVLVAGPWTGGSGSQSYSVLFDAEPVEACLVQPGVLRCRCPAHAPGIASLQVACDGFVVSDSVAFEYRRAPTSEPSPEKALLDRLADVEARLQGPGPPSPAAHLEERLVAYCQDAVVRPWRAGAEPLQSGGPTLLHLAAGLGYSRLACALLHWRAENPSSVLDAEVDALRQDTAGLTPLAWACAAGHADTARILYRWNAMALRVRDCQNRTATELAAENGHTAIAEELNQLETRRQDERLFLRPASPSPRRPSQDSGLDLALCGSPLLDNMELLQEDESSLGLSEQGMESAPTPQETVGEEDARVLTLAEQIIAALPERIKRAEGDSLSSSSPPPPTAPLSPLEDALMEQMPLDSGELFDSYRDCNGGAASVSDADADASPSSPSSSCLTPDSPSPPPTTADFCEFLQLQLQLDGNGNAHSGQYYSSNGGGERKLNGMIGSGAMTAVGAGNGNGDGSEADLSRLTLSDREQRELYHAARMIQKAYRNYKGRQRQEEAERHAAVLIQQYYRRHKQYAYHRQATRAALVIQNNYRNYRARPGSASARQQAVHQQAAHQAARKIQQFMRQSKIKLQNAKAVANGSGRPPAVTSRAAAVPQSSPSSSPGASLVAASPGVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00393592;
- 90% Identity
- iTF_01355300;
- 80% Identity
- -