Basic Information

Insect: Aphaenogaster miamiana
Gene Symbol: SMARCC2
Assembly: GCA_003063725.1
Location: NJRN01000328.1:134940-139986[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 8.4e-15 1.4e-11 44.8 0.2 3 44 641 682 639 684 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	8.4e-15	1.4e-11	44.8	0.2	3	44	641	682	639	684	0.95

Sequence Information

Coding Sequence: ATGCTGTCGTTAGGCCCGAAAAAGGACGGCGGACCCAACGCCAAGTTCTTCGAGGCGCCGGAAGTCCTCACTCAGCTCGACGGTGTTAAGCAGTGGCTGCTCAAGAACTGCAAGAAGtatGTACAAACGGATCCGCCCACTAATAAGAGCTTAGCCACATTGCTGGTACAGCTTCTGCAGTTCCAGGAGGATAATCTCGGGAAAAATGTATCAAAACCATCTATGACTAGGCTTCCAATGAAATGCTTCCTGGATTTTAAGCCTGGTGGTGGTGTGTGTCACATATTAGCTACTGCTTATCGTTTCAAGCAGGAGCAAGGATGGCGACGCTTTGATTTTCCTGGTGGAAAATCAGGATCCCGTATGGATCGTACAGTGGACATGCTGATGGCAGCGGAACGTACTTTAATACAGAATAGATGTATGACTGTACCAAGTATTTTCGTGAGACCGGACGTTGACAAGAACACAGCTGCAAAAGTAAAGGACGTGGTTAGGAAGCATCAGGGGACCGTGGTTGAGAATGAAGCAGATGCTACACATATTATCTATCCTCCAGTAGATCCAATGGAGGAGGAATACGCACGACCCTGTATGAGACGCGAGCGATCGGTTCTAATTCACTGGTACTACTTTCCAGACAGTTATGATTCTTGGCAGACATTGGATCTTCCATGGGACTATCCCGAAGGAActtatacaaatacaaattcAAGATCAATGTATAAAGTATCAGCTACATGGGCTTTAGACTTGGATCAATATAATGAGTGGATGAGCGAGGAAGACTACGAAGTAGACGATAGTGGTCAGAAGAGAGTACACAAGTACAGGCTCTCGGTGGAAGATTTGATGGCACAGCCATCTCATCCACCGCCCGCAAAGAAACCTAAGAGGAAACGATCGCCTAGCCCACCGCCAAAGCTCGGCAAGCGTAAGAGTAGTAGAGCACCGTCGGGTATCCAAAGCGCTTCTTCCGCGTCATCGGCAACAGTCCCGAAAAAATCGCGCGGCGCTGAGGAGGAGGAAGATCTGACTCAGGGAATGGAAGATCCGCCTGCCGAACCTCGCATTGTCGAGGTAGTCGCTACGCCCACGAATCCACCGATCACAGGTCAAGGTAATGCAACAACGGGTAACTCCACGTTGGCGTCTACTGGTAGTAAAAAGCAAGATAGTGAACTTCAACCTCTCAAATCTGGCAACTTGACCGATCTTGATGAACAAATGGAAGGAGACAAAGGGAGCTCTCAAGGTGGCCAagatagagaagagagagatacTAGTAAAGAAAGGGGTGAAGGTGGCAAAGGCGATGAACCGGAAGACAATGTGACAGAGCAAACACATCATATCGTTGTTCCTAGCTACTCTGCATGGTTTGATTATAATTCGATTCACACCATAGAGAAACGGGCTCTGTCGGAATTCTTCAATGGTAAAAATAAATCCAAGACTCCGGAAATTTATCTTGCGTATCGGAATTTTATGATTGATACCTATCGATTAAATCCAACGGAATATATTACATCGACCGCTTGCAGGCGAAATTTAGCTGGAGATGTATGTGCGATTATGCGCGTGCACGCGTTTTTGGAACAATGGGGGCTCATTAACTATCAAGTAGACGCAGAGTCCAGACCAACGCCAATGGGACCTCCACCGACATCACATTTCCATGTTTTGTCCGATACGCCGTCCGGTTTGGCACCAGTCAATCCAAATCCGCCAAAAACACCGCAGCCATCCGCTGCAAAAATGTTGCTCGACTTGGAAAAGAAACCGGCGAGCGTCCCGGGCGCTTTGGGTGTAGAAGAAAAGGTTTCGGCGGGCGCGATGGCGAACTTTGGTCTGAAGATCGACCAGTATTCGAGAAAACCGGCAGTCCTAAAGAACAAACAAGCTGCAGGTGCCACGCGCGATTGGACAGAACAGGAGACGCTTCTGCTATTGGAAGGATTAGAATTGCACAAGGATGACTGGAACAAAGTATGCGAACATGTGGGCTCGAGAACGCAGGATGAGTGTATCTTGCACTTCTTACGCTTACCTATAGAGGATCCGTATTTGGAGGAAGGCGGGCCTGAAGGATTAGGCCCGTTGGCTTATCAACCAATACCATTCTCGAAAGCCGGTAATCCTGTTATGAGTACAGTTGCCTTCCTAGCGTCGGTCGTGGATCCTAGAGTAGCCGCGAGTGCAGCAAAAGCAGCTATGGAAGAATTTGCCGCGATAAAGGACCAAGTACCGGCCGCATTAATGGATCAGCATTTAAGAAACGTCCAAGCTAGCGCTAATTCGGACGGCAAATTTGATCCAGCAGCAGGATTGGCACAATCGGGCATTGCTGGCACAGGACCACCAGAACCACCCGACGATACAGCGGCTTCTACTGCGACAACAACCCCGTCTGTACCGGCAGGCGCGGCTAGCTCTCCTCATTCCACAGCACCGACTCCGGAAGCGAAGAAAGAAGAACAAGATAAATCTAAAGACGCCATGGAAGTTGAACAATCTCAGATAGATGTCACGAAGAAAGAAGACGAATCGAAAGAGGGCGAAGAAGACACAAAGCCCACCACTGATCCAGAGGCTGCTGAAGCgaaggaaaagaaagataaGGTCGTAAGGGACGCTCAGCTTCAAtccgcggcggcagcggcgctAGCGGCCGCAGCTGTTAAAGCCAAACACTTAGCGGCTGTGGAAGAACGTAAGATTAAGTCATTAGTCGCGCTACTAGTCGAAACGCAGATGAAAAAGCTGGAGATCAAGCTACGTCATTTCGAGGAGTTGGAAACTACGATGGAGCGCGAACGCGAGGGTCTTGAGTACCAGCGGCAGCAACTCATCACCGAGCGGCAGCAGTTTCATCTCGAACAGCTGAAGGCGGCCGAATTCAGAGCACGACAGCAGGCTCATCAACGACTGGCTCAggaacaacagcagcagcaacagcagcagcagcagcaacagaaTCAACAACATCCACCCTGGCAACCGCCCGgcgcgcagcagcagcagcagcaaccgcCAAGTCCGCAGGCTCAACCGCAACAGCCTCCACCGCATACACCGCCACAGCAAACATAA
Protein Sequence: MLSLGPKKDGGPNAKFFEAPEVLTQLDGVKQWLLKNCKKYVQTDPPTNKSLATLLVQLLQFQEDNLGKNVSKPSMTRLPMKCFLDFKPGGGVCHILATAYRFKQEQGWRRFDFPGGKSGSRMDRTVDMLMAAERTLIQNRCMTVPSIFVRPDVDKNTAAKVKDVVRKHQGTVVENEADATHIIYPPVDPMEEEYARPCMRRERSVLIHWYYFPDSYDSWQTLDLPWDYPEGTYTNTNSRSMYKVSATWALDLDQYNEWMSEEDYEVDDSGQKRVHKYRLSVEDLMAQPSHPPPAKKPKRKRSPSPPPKLGKRKSSRAPSGIQSASSASSATVPKKSRGAEEEEDLTQGMEDPPAEPRIVEVVATPTNPPITGQGNATTGNSTLASTGSKKQDSELQPLKSGNLTDLDEQMEGDKGSSQGGQDREERDTSKERGEGGKGDEPEDNVTEQTHHIVVPSYSAWFDYNSIHTIEKRALSEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLSDTPSGLAPVNPNPPKTPQPSAAKMLLDLEKKPASVPGALGVEEKVSAGAMANFGLKIDQYSRKPAVLKNKQAAGATRDWTEQETLLLLEGLELHKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEGGPEGLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRVAASAAKAAMEEFAAIKDQVPAALMDQHLRNVQASANSDGKFDPAAGLAQSGIAGTGPPEPPDDTAASTATTTPSVPAGAASSPHSTAPTPEAKKEEQDKSKDAMEVEQSQIDVTKKEDESKEGEEDTKPTTDPEAAEAKEKKDKVVRDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHQRLAQEQQQQQQQQQQQQNQQHPPWQPPGAQQQQQQPPSPQAQPQQPPPHTPPQQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01473111;
90% Identity: iTF_00867330;
80% Identity: iTF_00128906; iTF_00129676; iTF_00127388;