Amia011103.1
Basic Information
- Insect
- Aphaenogaster miamiana
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003063725.1
- Location
- NJRN01000106.1:260271-279877[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 1.1e-14 54.3 0.1 1 45 521 566 521 566 0.96 2 2 2.4e-17 2e-14 53.5 0.0 1 43 954 997 954 999 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATACCAGGACACCCTGTACAGCGGCACCCGCAGCAGCGAATCGCAGCCCCACCATCGGCTTTATCCGGCGTTGTCGTCGTCCTGCAACCCGATACCCGGGAGCTTGGACCAGATTGGGTCGCAGCTGCATCACCCGGCACCCACGTCGTTGCCGTCGACGGTgctgacgacggcgacgactacgacgacgacgacgacaacgacgctCGCGACCGGCGTGGTAAAACAGGAGAGCCTGCAGAGGCATCATCTGCAAAATCACCATCATCATCTGCCCGCGCCGGTCCAGGACCATCTACAgctgcagcagcagcaacagcaggaAGATTCGCGCCGTCTGAGGCCGGGCGAAATCAAGAGCGAGGCCGCCGACGAGGAGCCCACAGACGGTGCCGCGCGGGAAGACACCTCGACGAGAACGACGGATacggcgacgtcgacgacggCAACGGCGACGGCGGAAGTAGCGACAACGACGGCAACGGCGACGACCACCGGTACCGCGACAACCACGTCGACAACGACAACGGCGACCGGCACGACGACGATAGTGACGAGACGGCGACGTGGACGCCGGCAAAACGACGGGGAGGACGTCGACGGGGAGGAGGACGGCGACGAGAACGACGAGGAGACGGGACGGGGCCAGAACGAGGCGGAGAAACGGCTCAAGCTCGACGAGGACGCCGACAGGTCGGCGGTCAGCCCTCTCAGAACGGAGAACGATCGTGCGACTCGGGATCATCCGACTGCCAACGCTACCGATACGGAAGGGACCAAGGAACGAACGGAGGAAATCGCGTTGGAGCGGGCACCGGTAACGCAGGGCTTACTGAGGGTAAAGAAAGAGGAGGAGCTGCAGGAGGTACCGGGTTCTGGCGGCGGCACCACGATACTGACGACGCCGGCGACAGATTCGGAAGGGACCAGGTCGGGGCTGTTATGCCGCGACGGGAACGCGGCCGCGACGAGCGTCGCGACACCGTTTCTCCTTGGAAGACGCACGAGCCCGCCGCCGGAGGACTGGAAGCCGCTCGACAAGTGTTACTTCTGCCTCGACGGCAAGCTACCCCACGACGACCAGCCGCCCCTTAGTCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCGGCGGAGTCACCGATGTCGGTCCAGGTGGATCCGATGGCGGCGTCTGTGGTCGCCGCCGCCCTCAGCGGCACTTACCCCACCTTGCTGCCCCAATGGTGCTTACCGCCGAGGGAGGCGCCCCTCGTTGGGGTGCAGACCCATCAGGACAGCGCCGCGGCGGCCGATCAACCGCTTGATCTCTCGGCTAAACCCAGAAATTCTCAGGATAACAACATATCTCTACTGGAGCAACAGAAAATACCTCTGAGAATGCCGACAGGCATCGATCCCAAGACTATCCTCAACTCGTGTTACCGTGCGAAACCGCGAATGACCGGACCGGTTGTgaccgcggcggcggcggcggcggctgcggcagGCGTCGGTGGTGTTCCAGTGGTGGGTGCCGGGGGTGGCAGGAGGACTTACACCGAGGAGGAGCTGCAGGCCGCCCTCAGGGACATCCAGAGCGGCAAGCTCGGCACGCGGAGGGCAGCGGTGATCTACGGGATACCGCGTAGCACTCTGCGCAACAAGGTCTACAAGCTCGCGATGGAACGCGAAAGGGACGCGTCCCTGACTAGCACCCATTCACACCCTCACGAGCCCGGCGCCCcagccaccaccaccaccaccatcaccaccaccaccaccaccactactactactacaACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCAACTTGGTGTCCGCGAGGTTGCAAGATTCGAGGTGGACGACAAAGAGCTCTCCGGTGCGGAAGAAGAGAAGGAAGTCGAGAAGGCCCTGCTGAAGCCTCTGCTCTCGTTGGAGGACCTCGTAAGGTTTTCCACGCTCGAGGGGACCGGTGGTGATTCCCTCAGGAACCTGCTGCAACGAGGACACGAGACAGGAGCCGAATGGCCGGGACTGGAACACGCGAACATCGGTCCTTACATTCAGAAGATGTTAGCTGCCGCTGCACCATTAGGTATGGATACGCGAGACTATCGCATACCCGAAGTGATGAGGAAGCTGATGAGCGAAGACAAGAGGCTGAACAAGAACGTGAACGGAGACCAGTCGCAGCCGCATCATCATCAGCACCATCCCCTCGCCGCGCATCAGCAGTCGCAGCAGCAACAGCGCGTGCCTATGACGAACGACGACTTCAATCCCAACATCGAGGAAGAAGCCAGCGACAGCGCTCAGGGCAGAGCGATACTGAAGATTCCGTCCTACAAGCCCGCCAGCACGCCGGGCTGTTCCAGTAAGAACGGCGAGCCGACTTCCGCCGCGTTCGCCCAAAGCTTCGCGACTGCCGCCTCGAGTCCGGGCCTCCTGGAGCGAGCTAGTCCAGCGTTCTCCGGCACCAGCAGCCCCACGAATTCGCTGGTAGGCAAAGCGGTGGCTGCCGTCAATTTCCGCGACGTCATCGCCAAGAGCATCAGCGTCAAGTTCCAAGAGGGCCAGACGCCCGGTGCGGCCGGCATACCGGGCTGCCAACCGGCCGGCGTTCCATCGCAACAGGCTATGATGACAGACCCGAGTCCGTTCAAGAGGGGTCGTTACACACCCCCGCAACCGCAGCAACAGCAATCGTCGACGCAGCAATCTAAACAGCAGTCGCAGGAGGCGAACAAATCGAAACCGGGTACCGGCGGCAAGGGCACCAGACCTAAGCGCGGCAAGTACAGGAACTACGACAGAGACAGCCTCGTCGAGGCGGTACGTGCAGTTCAGCGCGGCGAGATGAGCGTTCATCGTGCTGGCAGCTTTTACGGAGTTCCGCACTCCACCCTTGAGTACAAAGTCAAGGAGCGGCATCTCATGAGGCCGCGCAAGAGGGACCAGAAGCAACCGGACGACAAATCGAAGGAGACCGCGacgacggcagcggcggcggcagcagctGCGGCGATGCGGCCGGGTACTGCTGGCGTCGATAAGAAGCCGCAGCTGAAGCCGCAGAAACCGTTCACACCGCCCGGCGGTATACCCGGTCCAAACGGACTGAAAATGCCTCCGTTCATGGAGGGCATGCCCCACCTGCCGTTCGGGCCTTTCAACTTTTGGAACCCGACGCCCTTCATGCCCTCCCCTTTCATGGGTGGCGCGCCGAACGTGCCGATTCTTCCGGAACAATACTTTGCGTCGCAGAGAATGCGCGGACTGCAGGAGCAACAACGAAACGCCACGATGGTacagcagcagcatcagcaaCGAGATCGAGACGGGGTTGGCGTATCCGGAACGGCAGACGCGGCCGGAACTTCGAACTCTCGAAGCGCTTCGATGGCGAAGGCGCCGCGCGACATGGTGGAGAGCATCTACGACGGGCCCGGGGCGAACGGCAGTTTCCTGGACAATCTGATCAGGTCGAGCCTCGAGACAGGCATTCCAAGGGACCAGCGGGCGTTAGGGGAGGCGAGAAGCCAGCAGCAGTCGTCGTCGCAACATCCGGAGACGATGAGCAGCAAGACTCTGATCGACCAGCTTTGCAGAAACTCGAGAAGAACCCCGCTGCCGCGGATGGCGCAAGATAGCAGCGAGGATGAGAGTTATCGAGGACCAACGGGCAGGATAGTGCCAGAGAGACCGGAGCGCGTGCCCACGGTCGATCTCAGCCCCTCACCATCAGAGAGGGGTCGCACGGAGGACGGCAGCGATCGGCTGACGTCACCGCCGACGCCTCTGTCGATCTCCCGAGCGGGTAGCAGGGACGAGGACAGCACCCGTGACTCGAGGATCGATCGCAGTAGCAGAGAGCGCGAGGTTCACAACGGCGGCCAGGAGGATCGCGACCGGAAGCAGCCTCTGAGCctgcaacagcagcagcagcaaccaCAGCTGAATCACTACCCGGACTTACACAACCTCTACGCCGCGTCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGACTCAGCCGCAGCAACAACAAAAGGAATACGCTGCCGTGAGCGGGCTGGTCGTGCAACTGCAGAGGGGCTACAACACCGCGAGCAGCAGATCCGGCGAGCCGACTAACAGCCAGCAGCCGGCGGCGGCGGAGCAGCGCGGCACCGCGCTCAGCATGGAGGACTCCGTAGAGTAG
- Protein Sequence
- MGRRRWKQYQDTLYSGTRSSESQPHHRLYPALSSSCNPIPGSLDQIGSQLHHPAPTSLPSTVLTTATTTTTTTTTTLATGVVKQESLQRHHLQNHHHHLPAPVQDHLQLQQQQQQEDSRRLRPGEIKSEAADEEPTDGAAREDTSTRTTDTATSTTATATAEVATTTATATTTGTATTTSTTTTATGTTTIVTRRRRGRRQNDGEDVDGEEDGDENDEETGRGQNEAEKRLKLDEDADRSAVSPLRTENDRATRDHPTANATDTEGTKERTEEIALERAPVTQGLLRVKKEEELQEVPGSGGGTTILTTPATDSEGTRSGLLCRDGNAAATSVATPFLLGRRTSPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQTHQDSAAAADQPLDLSAKPRNSQDNNISLLEQQKIPLRMPTGIDPKTILNSCYRAKPRMTGPVVTAAAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRQLGVREVARFEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSTLEGTGGDSLRNLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPLGMDTRDYRIPEVMRKLMSEDKRLNKNVNGDQSQPHHHQHHPLAAHQQSQQQQRVPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQSFATAASSPGLLERASPAFSGTSSPTNSLVGKAVAAVNFRDVIAKSISVKFQEGQTPGAAGIPGCQPAGVPSQQAMMTDPSPFKRGRYTPPQPQQQQSSTQQSKQQSQEANKSKPGTGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSFYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKSKETATTAAAAAAAAAMRPGTAGVDKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMGGAPNVPILPEQYFASQRMRGLQEQQRNATMVQQQHQQRDRDGVGVSGTADAAGTSNSRSASMAKAPRDMVESIYDGPGANGSFLDNLIRSSLETGIPRDQRALGEARSQQQSSSQHPETMSSKTLIDQLCRNSRRTPLPRMAQDSSEDESYRGPTGRIVPERPERVPTVDLSPSPSERGRTEDGSDRLTSPPTPLSISRAGSRDEDSTRDSRIDRSSREREVHNGGQEDRDRKQPLSLQQQQQQPQLNHYPDLHNLYAASTDKKSACDSKLIVDHSSQKTQPQQQQKEYAAVSGLVVQLQRGYNTASSRSGEPTNSQQPAAAEQRGTALSMEDSVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01254708;
- 90% Identity
- iTF_00016606;
- 80% Identity
- -