Amia018395.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphaenogaster miamiana
Gene Symbol
ct
Assembly
GCA_003063725.1
Location
NJRN01000089.1:544856-549914[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.6e-28 2.1e-24 85.7 0.0 2 72 477 548 476 553 0.95

Sequence Information

Coding Sequence
ATGGAAAAACAAGACGGTGCGGTCGCACTCTCCTTACTAGGTTCGGTCCCAGATAAACGATGCTCGAAGCGAATCGCGAAGGAGGGAGAGGAACTCATAAATATCAACCAGTTGGTTGAGGAGGTGTCCAGGCTACAACAGAGCCTGCAACGCCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGGCTCGAGGAGGAACTCGAAGTGCGCAGGCAGCACATCAACAGACTGGAGAGCAAATTGGAACGGCAGAGGGATTATGATGATCTGAAGCGCGAAATCAGTGTACTGAGGTCAGTCGACCTTTCGCAGATACCAACTGGCGAACCTGGAAAGAGCTTAGAACATCTTCTTATGGAGCGTTTCAAGGCGCTCCAACAAGCCGAGAACCTGAAACCCTCCAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAaccaccgccaccgcctccGACTGCTGCCTCCCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTCTTCCCGCCACCCCTCCAGAATGTCGAGACCTTCGGCTCGTTTCTCGGTGAAGAAATCGTCGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATGAaccaacaacagcaacagcaacagcagcagcatcaacagcagcagcaacagcagcagcagcaacaacaacagcagcagcagtcaCAGCCATCTCAATTAAGCCAGTTAACTCAACAACAACAATTGCAACAAGCCCAACCACACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCACCGGGTGCGGATCCGTCGTCCACTTCGAACACTCCGGTGAAATCGAACACACCAATCGGTACAACACCTCTGGGCAGTCTAGATGTCACTGAAAAAGCGCCAACGCCGGTATCGGGGCACGAAACGCCAGCACCTCCAACTCCATCCTCGACAACGGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCGATGGTGGAAACTAGTACTCCTTCGGCTTCCATCAATGGTAGCGGTCTCACGCCCGGCATACCGAGCGCACCGCCTCCGAAGAGTCCGCCTGATCAAGAATCATGtcacaacaataataatagccATCATCTGGCGAATAACAATATTGGCGGATTGAGCGTTCTCGATACACTGAAGAGTCCGTTTCGGTTTGACGATCGAGCGTATCCCTTCCGATTCGGTGACGAGTTCGGTGCCGCTGGTATGGCCGGTCGGCTGGGCGAATCCCTCATTCCAAAGGGCGATCCTATGGAGGCGAGACTTCAAGAAATGTTGCGTCATAATATGGACAAGTACGCCTCGCAGAATCTTGACACTCTTCACATAGCCAGGCGGGTGCGCGAGTTGTTGTCGATACACAATATCGGTCAGAGACTATTCGCCAAATACGTACTCGGGCTAAGTCAAGGCACGGTCAGCGAATTGCTTAGCAAACCCAAGCCTTGGGACAAGTTAACTGAAAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGTGACGAGAACGCCGTGCTGCTGCTCAAGTCCCTGATCCCCAAGAAAGTTGTTCACCACAATGTATTCCTGCCTACGTCGTCGACGACGGACTTATCGATTGACTTGACTCTCGAAAATCTTCCGCCTCGCACTGCCAATAATCCATCTCGCCGAATCACTAACCACGAGCTGTCAGCTAATCTTTCGGCTGCCTAA
Protein Sequence
MEKQDGAVALSLLGSVPDKRCSKRIAKEGEELININQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQHQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTPLGSLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPGIPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRAYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKVVHHNVFLPTSSTTDLSIDLTLENLPPRTANNPSRRITNHELSANLSAA