Amia002500.1
Basic Information
- Insect
- Aphaenogaster miamiana
- Gene Symbol
- -
- Assembly
- GCA_003063725.1
- Location
- NJRN01000555.1:26278-31209[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.11 1.5e+02 2.9 2.0 7 26 411 430 409 437 0.86 2 2 2.8e-08 3.6e-05 24.1 11.4 5 62 460 517 457 519 0.93
Sequence Information
- Coding Sequence
- ATGACGTTATCCACGACAGTATACGCGTATCGTGCTCCCAACTCCCAACACCGTCCCGTGACGTGGTTTAACCCCGGCACCGCCGCCTCTCCGGCCGCATTTCACGGACGACGATCGAAGCGACTACACGACGGACTCTACCCGGCCCAAGTGGAAGGTACACAGATACCGATCGTCTCAGGGAGGGCTTCCAAAATCCCTCCTATCTACGAACGTCCAACAACCAGCAACATTTCAGTTGAGGAAGGAGGTGTTTTTAACGTATCAAAATCATGCAACCGTCAGCAGTTTCCGTCATCTGTTACTCGTGGCGTGAGATCGCGGCCACTGCGAGGTGCCACCTCGACGAAGGTGGAGACAGTTCCTCTGCTAAGCCCAACGATGGAGTCCGAGCTTTTGAAGGAGCCTTGGACATTTCCGCGCACAAAGGCAAATCCTACGAAAGAAGAGGATATCGCGGCACTCTCCGCCTGGGAAGAGGACTTTCAGGATCTGAGCAGTTGGTGCATGGACACGTTCCAGGGTCAATGCGATTTTCATATAGGTGAATCGACTACGTTTAAACTGTCAGGTACGAAATACGAGGGTAACAGCGTTTCGATTGCAGAAGAGGAAGGGTTGTTAAAGGATTTGACGAAACCGACTGATGATGAGAAGTTGGATTTGAAAATGGATACCGTTAAGACGACCAAAGAATCAAGTGACAATCGTCACTTGTTGCTATCTCCATCGGAACTCGTTAACGAATACGGATTAGAACATAATAATGAAGAGAACAAGGCATCCAGCTTGTGGTTAATGTCACCCGAATCTACAACTTCTAAAAGCACCTCGTCGAGCAAACAGCATAATGCAGATGTTAGCGCATTCCAATCCAAAGGTCACAATTTGGATAACGCTTGCCCAACGTCGTTTGATACCGCCGCGAATCAACGTGAAACGTGGGATGAGCTACGCACGATCGAGACAAATGGATCGGATACTTTTGACTTATTATCGTACCTTTGGGAGGATGAGATGCGTTCACTGGAAGGTAGTGTGTCTATCGATTCCTCGACGATATTGAAAGTTAGACCGCTCCCAACAACGTCGTCGCTATCATTTACCTCCACGAAGGTAAAGACGGAGGAGGTCAACGAGCCGACGCCACCTCCAACGCGTCGAAGGATGGAGACCCGCGCGACATCGACGATGACCTCATCCACGACAAAGTCTCCCGTAACGTCATCTCGAAGATCGGAGAGAACGAGGATAGCGGCCACTAAAAgcaaagaaagggagagagtcACTGACACCAATACAAAAACAAAGGACAAGAACGGAAGGAAGAGATATTACGAGGAGAGTGATTCCGAGGACGATGTCATGCTCTCTCAATATAGGGAATGCCGTGAGAAGAATAACGAGGCTTCGCGAAGATCACGGATGAACAAGAAAGTCAAGGAATCGGAAATGACCACGAGGGCGACCGAGCTGGAGAGGGACAACAAGATACTGAAGATGAAGGTCGAGGAGTTGGAGAAGCTGGTGACGTCGATGCGCAATGCTTTATTACGATCTgctttaaagaaagaaatttaa
- Protein Sequence
- MTLSTTVYAYRAPNSQHRPVTWFNPGTAASPAAFHGRRSKRLHDGLYPAQVEGTQIPIVSGRASKIPPIYERPTTSNISVEEGGVFNVSKSCNRQQFPSSVTRGVRSRPLRGATSTKVETVPLLSPTMESELLKEPWTFPRTKANPTKEEDIAALSAWEEDFQDLSSWCMDTFQGQCDFHIGESTTFKLSGTKYEGNSVSIAEEEGLLKDLTKPTDDEKLDLKMDTVKTTKESSDNRHLLLSPSELVNEYGLEHNNEENKASSLWLMSPESTTSKSTSSSKQHNADVSAFQSKGHNLDNACPTSFDTAANQRETWDELRTIETNGSDTFDLLSYLWEDEMRSLEGSVSIDSSTILKVRPLPTTSSLSFTSTKVKTEEVNEPTPPPTRRRMETRATSTMTSSTTKSPVTSSRRSERTRIAATKSKERERVTDTNTKTKDKNGRKRYYEESDSEDDVMLSQYRECREKNNEASRRSRMNKKVKESEMTTRATELERDNKILKMKVEELEKLVTSMRNALLRSALKKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00765300;
- 90% Identity
- iTF_00127208;
- 80% Identity
- -