Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_003063765.1
Location
NJRO01000011.1:536966-541549[+]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.029 3.5e+02 1.5 0.6 4 24 459 479 456 484 0.91
2 2 5.3e-25 6.4e-21 74.3 5.4 3 49 541 587 539 588 0.96

Sequence Information

Coding Sequence
ATGGTAGCAGCTGCCTCCGCTACGGCCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGCCAGGATATCCCCTCGCAATTCAATCAGATGCAGAGCCAACATGGAATACCCCACCAAACGTACAATGCGGGGTACGGCCAAAGAGGACCAATGGCAGGAATGGGGCCAGTCGGGATGAACAACTTTAATGGCATGGGCACGATGAGCCCGATGCACACTATGAATTCCATGAATTCGATGAACAGTATGAATGGCATGAACTCGATGAATCCTATGACAATGGGAGGAATGAACGGTATGAATGCTATGAGCGGTATGAATGCTATGAGTGGAATGACACCCATGAACTCCATGAGCAACATGGGTAACGTAGCCATGAACAACATGATGGGACCCAACAACATGCAAATGAACAAGATGCAGGCTCAGCCGCATCAAGGCTACCCACGAAGATTAGCGCCTTATCCGAACCCAGCCATGCATATGGCGCAAAAGCGGCAGCAAGTTCCGTACGCTGCTCAAAATCCAGCGGCTTTGCAGCAGGGCTTCAACGGTATGACGGCGGCGCCGAATTATCCAAACACCTACCCCACCGGGGCGAGGCCGAATTTTCAGCAACAGTATCAGTCTATGCAAAGCATGAATCCCACGGCGGCTGGTTTTGGGCCCAACGCGATGATACGAGGAACGAATATGAGGCCGCAAACGGCGCCGGCTTACAATACCGCGTCTCAGACGGCCGCCGCGAACCAATACGGCTACGGTAGTAACGGCGTTCCCGGTGTCTGCATGGTCCCACCTACCTCGGTTGGCAACCAATTCGTCGGTCATCAGCCGAACACGGGATACGGTGGCGGCAACGCGTCGTACGGCGCGTCCGCCGTGGCGACCAGTCAATACCAGCAAGACGTGGTATCGATGAGATCGACGAACGGGGGCAACATGAATTATCAGCACAGTCCCATCCCTGGCAATCCGACACCTCCGTTGACACCCGCCACTAGCATGCCGCCTTACATCAGTCCGAATCCGGACATCAAGCCTAATTTCAACGAGATGAAATCACCCGTCAACATTCAGAATGATGAATTGAGACTAACATTCCCCGTAAGAGACGGCATAATTCTTCCACCCTTCCGCCTAGAGCACAATTTGGCTGTTAGTAATCATGTATTCCAACTGAAGTCCACCGTGCATCAGACGCTAGTGTGGCGATCAGATTTGGAGCTGCAGCTCAAATGTTTCCATCACGAAGATAGACAGATGAATACGAATTGGCCGGCGAGTGTGCAAGTCTCCGTTAATGCGACTCCTCTCGTGATCGACCGCGGGGACAACAAAACTACCCACAAGCCTCTCTACTTGAAGGACGTCTGTCAAGCAGGAAGGAACACAATACAGATTACCGTATCCGCATGCTGTTGTTCGCATCTATTCGTACTTCAATTGGTCCACCGACCCAGTGTGCGAAGTGTACTTCATGGGTTACTACGTAAAAGGCTGTTAACGGCAGAGCACTGTATAACgaaaatcaaaagaaatttcaataataCGATGTCGAACAACGGTATACAATCGGAGAAAGATGTTGTGGAACAAACAGCACTAAAGGTACTCTTAAAATGTCCTATCACCCACAAACGCATTACACTGCCAGCCAGAGGACACGAGTGCAAGCATATACAGTGTTTCGATTTGGAATCATATTTGCAAATGAATTGCGAACGAGGTAACTGGAGGTGTCCAGTATGCTTGAAATCTGCACAGCTGGAAGGTCTAGAGGTCGATCAGTATATGTGGGGTATTTTGAATACATTAAATACCACGGAAGTTGACGAAGTGACGATAGACTCGTTAGCTAACTGGAAACCTGTGAAAAACTTAACTGGTATTAAATCCGAAGAAGAAAACGATTGTAAAAGAACGATCAAGGCTATGTCGCCAGGCAGTATGAATATGCCAACTATGAACAATTGGGATATGAATCAAGCTATGAGTCCTTACATACCACCCGATATGAACAGTATCGCGAGTGGTTCGATGATGAACAATACATCTTCTACGTATCAAAATAACAGCATAAACCACCGGAACACGTCCGGTGGAACGTACGAGATAAACTCTGGAACGAATACTATCGGCAATAATGATTATGTCAGTGGAACGGGTCCGCTCTCGCATTTAAACGAATCCGTTAATTCTTTAGATCCTCTCAATGCTATGGAGAAATCACTCAACGACCAGATGCCTCATACTCCTCATACGCCGCACACTCCGCAATCTACTCCTCACACGCCAGCTGGTGGTGCCAGTGGACCGCCGAGCGTTCCGCCTGCATCGCAAGAATCTACGGGAAACCATAATACTTCTGgcaatacaataaataacgACACCGCTGCAGACATACCGTCGGACTTAAATTTCGATCCTGCTGCAGTTATAGATGGGGAAGGTACCGGCCAAGAGGCGTTAAATCTCTTACCAGACAATGTGGATGCAATGGAACTTCTCTCGTATCTCGATCCACCGGACCTAAACACTCCACCTAGTAGCGGCGCTAGCAGTGGTAATCCTTCCTCTAACGATGACATATTGGCACTCttcgaataa
Protein Sequence
MVAAASATATATASVVAMQDRQDIPSQFNQMQSQHGIPHQTYNAGYGQRGPMAGMGPVGMNNFNGMGTMSPMHTMNSMNSMNSMNGMNSMNPMTMGGMNGMNAMSGMNAMSGMTPMNSMSNMGNVAMNNMMGPNNMQMNKMQAQPHQGYPRRLAPYPNPAMHMAQKRQQVPYAAQNPAALQQGFNGMTAAPNYPNTYPTGARPNFQQQYQSMQSMNPTAAGFGPNAMIRGTNMRPQTAPAYNTASQTAAANQYGYGSNGVPGVCMVPPTSVGNQFVGHQPNTGYGGGNASYGASAVATSQYQQDVVSMRSTNGGNMNYQHSPIPGNPTPPLTPATSMPPYISPNPDIKPNFNEMKSPVNIQNDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKSTVHQTLVWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNATPLVIDRGDNKTTHKPLYLKDVCQAGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLHGLLRKRLLTAEHCITKIKRNFNNTMSNNGIQSEKDVVEQTALKVLLKCPITHKRITLPARGHECKHIQCFDLESYLQMNCERGNWRCPVCLKSAQLEGLEVDQYMWGILNTLNTTEVDEVTIDSLANWKPVKNLTGIKSEEENDCKRTIKAMSPGSMNMPTMNNWDMNQAMSPYIPPDMNSIASGSMMNNTSSTYQNNSINHRNTSGGTYEINSGTNTIGNNDYVSGTGPLSHLNESVNSLDPLNAMEKSLNDQMPHTPHTPHTPQSTPHTPAGGASGPPSVPPASQESTGNHNTSGNTINNDTAADIPSDLNFDPAAVIDGEGTGQEALNLLPDNVDAMELLSYLDPPDLNTPPSSGASSGNPSSNDDILALFE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00863647;
90% Identity
iTF_00129412;
80% Identity
iTF_00129412;