Basic Information

Insect: Aphaenogaster fulva
Gene Symbol: -
Assembly: GCA_003063765.1
Location: NJRO01000194.1:378735-382211[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0034 0.4 11.6 0.4 1 23 124 147 124 147 0.90

2 12 0.0088 1.1 10.3 4.6 2 23 269 291 269 291 0.91

3 12 4.9 5.9e+02 1.7 7.6 3 23 441 462 440 462 0.95

4 12 5.9 7e+02 1.4 2.3 1 23 511 534 511 534 0.92

5 12 0.00067 0.08 13.8 0.2 2 23 582 604 581 604 0.94

6 12 0.00061 0.073 14.0 0.1 3 23 627 648 625 648 0.93

7 12 0.0064 0.77 10.7 3.6 2 23 702 724 701 724 0.96

8 12 0.087 10 7.2 4.2 3 23 739 760 737 760 0.92

9 12 0.00022 0.026 15.3 0.1 2 23 808 830 808 830 0.94

10 12 0.12 15 6.7 0.5 1 23 909 931 909 931 0.98

11 12 0.0017 0.21 12.5 1.7 2 23 945 967 944 967 0.96

12 12 0.0057 0.68 10.9 0.8 1 23 1040 1063 1040 1063 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0034	0.4	11.6	0.4	1	23	124	147	124	147	0.90
2	12	0.0088	1.1	10.3	4.6	2	23	269	291	269	291	0.91
3	12	4.9	5.9e+02	1.7	7.6	3	23	441	462	440	462	0.95
4	12	5.9	7e+02	1.4	2.3	1	23	511	534	511	534	0.92
5	12	0.00067	0.08	13.8	0.2	2	23	582	604	581	604	0.94
6	12	0.00061	0.073	14.0	0.1	3	23	627	648	625	648	0.93
7	12	0.0064	0.77	10.7	3.6	2	23	702	724	701	724	0.96
8	12	0.087	10	7.2	4.2	3	23	739	760	737	760	0.92
9	12	0.00022	0.026	15.3	0.1	2	23	808	830	808	830	0.94
10	12	0.12	15	6.7	0.5	1	23	909	931	909	931	0.98
11	12	0.0017	0.21	12.5	1.7	2	23	945	967	944	967	0.96
12	12	0.0057	0.68	10.9	0.8	1	23	1040	1063	1040	1063	0.98

Sequence Information

Coding Sequence: ATGTCGTCGAGCGTGACGTCGCCGCGCGAGCccacgacgacgatggcggcgGAGGCGACGGAGCTGGACAGCGACGGTTCGAGCTGCGGCGAGCGCGACGTCTGGAAGCGCGTTCGCGGCGACCCCGCCGACGCCGGGCCCAAGAAGCGTCGGAAGCAGACCACGCCGGTAAGAGTCTCGTCCGGCCTCGCGGACGTGCACGAGGATGCGCGCGAGGACGAGCGCGAGGACGAGGACGTCGAAGGTAAGCCGTCGTCGCGATCGCCGTTGCCGAGCAACGACCATCACCACCAACAatgccaccaccaccacctccaccaccaccaccatcatttGCCGCCGTCGAAAGACGAGAATCTGAACAACGAGTTTCGCTGCCAGCACTGCGGCCGGCTCTTCGACAGTGACGAGACGCTCAATGTCCACGTGGACGGCGAGCACGGCGGCGCGAGTCAGGCGACGCCGGGTGTCGCCATCAAGGTAGAGCCGACGCAGCAGCTGGATCCGACTAACGAGAGTCCCGCTAGTCTCTTAAGCGTTAGGAACTTCGCGACCACGTGGCTGGCGTCCGGCAGTCAGCAGCACGTGCAATCGCAGACGCAGATGCAGGCGCAGACCGATGAATCGTGGTCGGGCGGCCCGGTCAATCAGATCGTCACGATGACCAATCACCTACAAGCGCTCTCGAGTTTCCCGGGCGCCCTCGCACAGTATATACCCCTGCCAACTTTTCCCCTGACCGATCCCCAGCTCCCTAGATCCTCCCTCGGTCCTATACCGGTCAAAATCTTCAATCCGGACGCGTACTGCGACTTGTGCAACAAGGAGTTTTGCAACAAATACTTCCTGAAGACGCACAAAGCAAACAAGCATGGGATCTACGTTGATTCACCAGCACCAACTGCGATCATGGATTCTGCCAACGTCGCCGGCAGCAGCGTGTTTGGTGCCGCGAATTTTCAGGCAAGTAATACAAGCGTGAAACTGGAGCCGCCGGCGACTCCGCCGCAGAAGCGTTTCCGCAACGATGATCCTATGAGGAAGCACAAACAGAAAATGCACAACGAATCGCCGATGGATCAGCAGTCAGACGGCCAGCAAATCTCTGTATCGCAGAGCGAGGAAGATCAAGTGACGCCACGCGACAGCCCCAGCGGCATGGAGGCGCTCCTGAAGCAGGAATACGGCGTCGAGCAGGAGGACGCGACCTTCATGCCGGCCCCGAGACACCTCTCGCCCCAGTCCATGCAACAAGCACGCGATTCCGGTTTCAGCGTCGATCTTCTGCGTCGCCTGGGCGTCTTAAATCCCGAGGCGTTCTGCGAGATCTGCTGCAAGGAGTACTGCAACAAGTATTTCCTGCGCACGCACAAGATGAAACGGCACGGCATCATCGTGCAGGACAACGAGAGATCGCCCAATAATCCCGGCCAGGCCGTCGCCACCTGGCACCAGGTGCAAACCAGTCCGCTAAACTTGATCGTGTCTGAAACCGCTACCGGTGCGGAGTCCAACGATCGCAGCGAGGAGCACGAGTGCAAGCCCTGCGATATTCGCTTCCAGACGATCGGTCTATATCAGGCGCACTGCAGGAAAATTCACGAGATCGAGGAACGCGGTTCGCCGAAGCAAGAATATGACCTGGACATCTCCGATCAGCGTACCGACTCGATATCAGAGGACCTTCAAAAGTTGCAAACGATGATCATGCAGCTGAACGGCCTGGATTCTAGTAAAGGATTATCCTGCGCCGCCTGCGGCAAGGAATGTGACTCAAGGTCAGCCTTGCGCGTTCACATGGCGACTGAACACGGTGTCGCCGGCGATGAAGCCTCGTCGTCGCCACAGAAGTCACCCACGGCCATCTCGACTATTTTCTGCACTCTCTGCGAGAAGGATTATCCTAGCCAAGACGCACTGAGGAGACACATTAGCGAGGAACATCAACCTATTGTGTCCAGCGCTATTACTCTGCCGGCTTTGCCGCCAACGGTAATCGTTTCTTCCGCCAGTTCGACGCCGACTAGTCAAACACCAAGCAACcaaacaacgacgacgacgatgacagaGAAGAAAGTGACATCAATGACCCCCACGTCGAGCTATTGTGAGATCTGCAACAAGGAGCTGTGCAACAAGTACTTCATGAAGACGCACATGCAGCGGATGCACGGCATCGAGATCGAGAATGGCGCGCAGATTGGCGGCGTCATCTGCAACATCTGCAACAAGGAGCTGTGTAGCAAGTACTTCCTGCGCGTTCACAAACACAACACTCACGGAATCGTCGACGAGAACACGTCGTCGGGATCGGCGTCAAACAAGCAGGAGTCCTACGACGCTCCCGGCACCGAGGACTCGACGCTAAAACCGGAGCAATTGGGCGATCTCAGTCACAGATACTTTACTCATTTTACCGAGGTATGTCCGATCTGCAGTCGAAGGTTCCGCAGCATCAAGTGGCTGAAGGCCCACCTGATGGGCGATCACGGCAAAGCGGGGATCGACAAATGGCGCGAATTGGAGCAGCAGTATCAAGCGACGTCCAGAACCAGCGGCAGAAGCGTCGCTCCGACGAAGAACACTCAGCAAACGTCGAATCTGAAGATCCCCAATGGCTTCGAGGTTGCCCAACAGGTTAAGCCTGTCGATTACACGAGTCTGGGAAATCAGATGTTATCGAATCTCCTCGGTTCCTCGTCCGAGGAGCATCAATTGAAGAATTATCGCTGCGGCTACTGCAACTTTACGACCCCTGTGCTACCCTTCCTCTTTCTTCACGAGCGATCCCACGTGAGCCATCAAGAGAATCTCGAGGGCGATCGAGCGCTGCAGTGCCCGATCTGCTCACACGACTTCCAACAGCCGGAGTTGCTTCATCAACATCTGCTCACCAAACATCAGTTCCCCGCTCTACTGTCGCAGTTCCAACATCCTCTCATGAATAATGTTAGATCGGACATCGACGTCAAAACGAGCAACGCCAAGGACAGAACTGATCAGGATACGAAAGACGACCGTGTGGAATGCAGTCCGCAAACCGATCAAAACGTCCCCGAGCCCGCGAGAAACCAGCGGCAGGACGATAACGCGGTGCAGGTGACTCCTCAGGGCGTGTACAAGTGCGCCCAGTGCGGCTACGCGACGACGAATCTGAATCGCATCAAGAAGCACGTGCGGAAGGATCACAAGACGATAGGCGATCCGACGGAAAGCGTGATCGCCGAGCTCAGCAAGACCCTGAAGGACGTGGCGAACAAGCAGAAGATGCCGGCCTGTTACGCGATGCCGCAGGACATGAACTCGAATCCCGACAAGACTATCATGCAGCCGTTCCTGATCGAGGAGCAGGATCTGATGCAGGCGGGCGCCGAGTCTAGCTCGACGAAGAGATTCGCGCCGGCTCTGGTCTACTTGCCGGTCAAGTCCAGAATCAGCAACGTCCTGACCGCCTCCTTTACTCTCACCCCCGCCTGA
Protein Sequence: MSSSVTSPREPTTTMAAEATELDSDGSSCGERDVWKRVRGDPADAGPKKRRKQTTPVRVSSGLADVHEDAREDEREDEDVEGKPSSRSPLPSNDHHHQQCHHHHLHHHHHHLPPSKDENLNNEFRCQHCGRLFDSDETLNVHVDGEHGGASQATPGVAIKVEPTQQLDPTNESPASLLSVRNFATTWLASGSQQHVQSQTQMQAQTDESWSGGPVNQIVTMTNHLQALSSFPGALAQYIPLPTFPLTDPQLPRSSLGPIPVKIFNPDAYCDLCNKEFCNKYFLKTHKANKHGIYVDSPAPTAIMDSANVAGSSVFGAANFQASNTSVKLEPPATPPQKRFRNDDPMRKHKQKMHNESPMDQQSDGQQISVSQSEEDQVTPRDSPSGMEALLKQEYGVEQEDATFMPAPRHLSPQSMQQARDSGFSVDLLRRLGVLNPEAFCEICCKEYCNKYFLRTHKMKRHGIIVQDNERSPNNPGQAVATWHQVQTSPLNLIVSETATGAESNDRSEEHECKPCDIRFQTIGLYQAHCRKIHEIEERGSPKQEYDLDISDQRTDSISEDLQKLQTMIMQLNGLDSSKGLSCAACGKECDSRSALRVHMATEHGVAGDEASSSPQKSPTAISTIFCTLCEKDYPSQDALRRHISEEHQPIVSSAITLPALPPTVIVSSASSTPTSQTPSNQTTTTTMTEKKVTSMTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICNICNKELCSKYFLRVHKHNTHGIVDENTSSGSASNKQESYDAPGTEDSTLKPEQLGDLSHRYFTHFTEVCPICSRRFRSIKWLKAHLMGDHGKAGIDKWRELEQQYQATSRTSGRSVAPTKNTQQTSNLKIPNGFEVAQQVKPVDYTSLGNQMLSNLLGSSSEEHQLKNYRCGYCNFTTPVLPFLFLHERSHVSHQENLEGDRALQCPICSHDFQQPELLHQHLLTKHQFPALLSQFQHPLMNNVRSDIDVKTSNAKDRTDQDTKDDRVECSPQTDQNVPEPARNQRQDDNAVQVTPQGVYKCAQCGYATTNLNRIKKHVRKDHKTIGDPTESVIAELSKTLKDVANKQKMPACYAMPQDMNSNPDKTIMQPFLIEEQDLMQAGAESSSTKRFAPALVYLPVKSRISNVLTASFTLTPA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423182;
90% Identity: iTF_00127065;
80% Identity: -