Basic Information

Insect: Aphaenogaster fulva
Gene Symbol: -
Assembly: GCA_003063765.1
Location: NJRO01001119.1:4310-10863[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00022 0.026 15.3 0.3 1 21 776 796 776 797 0.95

2 9 0.00048 0.058 14.3 0.7 2 23 935 956 935 956 0.97

3 9 8.6 1e+03 0.9 0.5 3 23 1168 1188 1167 1188 0.93

4 9 5 6e+02 1.6 0.4 1 16 1199 1214 1199 1216 0.82

5 9 0.00099 0.12 13.3 0.1 1 20 1266 1285 1266 1287 0.94

6 9 0.0058 0.7 10.9 0.8 2 23 1320 1341 1319 1341 0.92

7 9 4.2 5e+02 1.9 0.3 1 23 1363 1385 1363 1385 0.93

8 9 0.51 61 4.8 2.9 1 23 1392 1415 1392 1415 0.97

9 9 0.0011 0.13 13.1 1.2 3 23 1739 1759 1738 1759 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00022	0.026	15.3	0.3	1	21	776	796	776	797	0.95
2	9	0.00048	0.058	14.3	0.7	2	23	935	956	935	956	0.97
3	9	8.6	1e+03	0.9	0.5	3	23	1168	1188	1167	1188	0.93
4	9	5	6e+02	1.6	0.4	1	16	1199	1214	1199	1216	0.82
5	9	0.00099	0.12	13.3	0.1	1	20	1266	1285	1266	1287	0.94
6	9	0.0058	0.7	10.9	0.8	2	23	1320	1341	1319	1341	0.92
7	9	4.2	5e+02	1.9	0.3	1	23	1363	1385	1363	1385	0.93
8	9	0.51	61	4.8	2.9	1	23	1392	1415	1392	1415	0.97
9	9	0.0011	0.13	13.1	1.2	3	23	1739	1759	1738	1759	0.97

Sequence Information

Coding Sequence: ATGGATATCTCCGACGAGGAACTGTTTGATGCAACACCAAGTTGTAGCACTTCAACAACAAACACGAGTTTGAACTTGACAGAGCAAACAAAAAATTTGACACAGAATCCTATTCAAGAGAAAGACTGCAATAGTATTTTAACTaaagatatttcagtaaagcTTACACGTTTACCAAATGTAAAGAAAGAACGAACAAATTCGCATTCATTTAAAAGTAAGAAAAGACGTTATACATGGAAATATGGGTTTTTAAAAGGAACACAATTCTATAAGCGAGAAAAAAAAGCATCTTCTAAATCTTCGAAATCTCAGCAAGCATTTCGAAATATGGAATCTACTGAAGTTAAATCGGGACCGTCAGAAAATGGAGTAAATGAGCAAATACCTACACACTTGTACAATCAATCATATAAAGCAGGAGAATCATATGGAGACGCTCAGCAGAATAAGCAAACTGCACAGAAGGagactaaaaattttattttatcaacgtGTCAAGTGCAGgaagaaaatttgtgtactGATGAAACTAATGTGTGCGCACGTACTTTACCATTCAAGTTTTATCGAAAAAATAGCATCACATCTAATAATGTAAACGCAATAAAATGTTCCGATTCTCTTTTATCACcatcaaaaaacaaaaatactgAGTCGAGTTCACATAGCGATAAATTCTATTTGTCTGACTCTTTGTCTCCAAAAGCGAAGAAAAGACTGATTCATACAAGATTGAAGTTCATGGCCAAAAGAATGGGTAAGCAGTTAGATGAATGGAAATTTAAAAGGAAATCTGTTACATCTGACAGTGAAACTGACGAACAACTTATACCAAAGAGAATTCGTCGAAGACTGTCATCGAATGATTCTGATAATGAAGATGCAACTATAAATAGTATAGAAGTAATCGGAAATAATAATCAGAATGAATCTCATTTGTCTCTTAAAAAGATTgatgaaaaagaaacaaatatacaGATTAGTCGCACGGTGCGAGTTATTTTAACAAGATTGGAAGAAATGGAAGATGAGGAGGTTATTAAATGGCGAGAGAGCAAAACGAAGCCTTCAGATATCATTGCATCTGAACCAGTAGAAGAACAACAACTGGATCGAAGGAAACTAGTACGAAATTTGGTAACTTTAGAATCTCGAGACAAATTAATTTTGCCAAAAGAAGATAGGGTCTTGGAAATGAAAGACATTCCTAATGATCCTCCATTAATCACGACCAATAATTGCATTGAAAGACGCTATGCAAAGTCCAAGTTGAATAAGCTAAGGAAGAAATACAAACTGTTTAAGAAGCCTAGAGTTCTAATGATAAAACTAGATACTTTACAATGTTCTTCTAAAAATGGTAGATATTCAGCGATTCAGATCGATTGTTTAACGAAGAAATATGTAAACTTTGTGATAAATGTTAATTTCCATTATAAATCTCATGGACTGAAGATGTATAGACATGTGCACTTACGAAGAAGTATGTCAGATGTAAATACCACTTACTCGGAAGATCATAATGCAAGCCCTAGTGTATCCAGGACACAAAATACGAACACAAGATTTAAACCACCAGGGTTTACAGAAGAAAGTTCAATGAAAGATGTTGAAGCTACAGAAAACAACGATGAGAATGTTCCATTCAAGATCCATCGAAAGTTTGCGCGCATCCAGAATCGGCATAAAGCTTCATCGTCAGGAATATCCGAAAAGAAGAATAATACTTTGTCACCGAAACGTTTAGAAATATGGCGAAACGCATTTCGCACACTGATGATCACGGAAAAATCGCAAAAACCAACCGCTTCTATGCAGTCAACATCAATATCAAAAACACTTCATATTTCGCGAAACTCGCCGAAGAAATCGATAAATGCGGAATGTGAGAGTGTTATCACTCCTTCCACACCTACGTCTTCCACGAAACACAATACACCAGTCGGATCTCCTAGAAAACTCGCTTCGTCTAAGAAACAAACAGAAGCGTCAACAAAGCCGACAGGGTGTGACGATACATCTAAACTTGAGTCATTCATCAGACATGAGAATCTTCCAAATGACGCGAATGTTGAACAAATTATCTCTAGAAGCGACTTTACTCAATCTAAGGACAGCACTGTTTCTAAAAGTCCGCGTAAAAATGCGAAAGATGCAGACGTTACCATATCAGATACTTCTTTAAATTcgagtaaaaaaatatcaaaattacatGAGAAAGCGAACAACCTTGAATTGTCAACTAATGATGTGATACCTGTAAAGTCGAAGACCTCGGAAGTATGTGGCGTTGAACAGTTATCACACAAAAAAGAGCGAGCATACAGGTGCCACTTGTGCGACGCATCATTCAAGAATGACGAATTATTGTTAAAACACATGGCTATGAATTTGTATAAATCATGTGCAGTTGTGAATCCTACATCTAGCGATGCATCAAAATGCATGGAAGCTTCGATGTCAAACGAAACAATTACAAATAAGAAGCACAGTCAAAATTTGGAGAACTCGAAATTGTCGACATTGCAACAACAATGTTCTTCTGTTAACAGCGAAAGTAGTTCACATCAATTGGATAAATCTGTTATTGATTCCGATATGGAAATCCCGTCCTTATCTTCTTCCTCGTCATCGTCAAGAGGCAGCAAAACGCGCCGCGAACATTTCAGAATACcacaaagaaaaacgaaaactaGATCAACTGCAAAGTCAAAATCTGATCTCAATTTGGATTCGTCAAATAGAGAGGAAATTCTAGAATCCAAGAATCGCTCGATAAACATGAAATTAAAACGGGCGACATGCAAGATTTGTTTACAGGTCTTTGATACTCAAGCACAGTTACTTCAGCATATGTTTAAGCATTTTGCCAACGACCTCCGGAATATGTACACGTCGATCGAAAATAAACTTGATTCTGAGCACCAAGAGCCTAACGAGAATAACAATCAAGTTTCCGATGATTCGACGGAAAATTCGGTAGAAGCAGCTGTGGGAGAGGCCGTTGAGGTAGCCGAAAACAATATCAACGAACAAGAGAAGAATTTGCCAGAAAATACAAACGAATCGAGTGCGGAGAATCTTGTTGCTTCAGAAGTATCACAACATGATGCAACTAAGGAAGGAAACGAAGCTTCGAACTTATCATCGGCAGAGTTCACTAAAGAGCGAGATCTAGGAAAGCAATTGACATCTGTAGCGAGCAACGCCGAACACAAGGCGACCAAGGTGCAGTGTGCGGAGAAAGAAAAATCGTGTGTTGCTGGACCGTCTTTGGAACTTCAACCGATGAAGTCCTTCACTATCTGCGCGTGCCACAGGCCCAAGACAAACAGGACGACGGGAACGAACGTTCAAATCGAGATAGTTTTGTTATGTACCACTTGCCAGACATTGTTTCGACGCTTCGAATGTTTCGAGTCGCACTGTACCCCGCGTTCCGCGGAAGGCACGCTTTGTGGCAAAAACCGACGGAATGGCAGGAAGTCCAAATTGCTTTGCGTCAGCTGCCAGCAGATGCTGAATTCTGTCCAGGATTTGTGGCATCACCTGGTAATGCATTCTCGGCTTAATCGCACAGGCACGGCGACTTTCTACTGCAACATATGCAAGGTGATCTTCTATGGTCTCGGACAACTTTTTTATAACCATTTCCAGAATCATGCGAAGAACCCATTCTTTCTGGCTAGTCGTCTTTCGTTTCCGAGACCTTCCTACATTGGCTCGAAACTTATCAAATTACCGGCGACAGACAACGACAAGTCGATAGAGGTTTATATGCAGGTAGCCGATTATGTGTGCAATGAGTGTAGAACACCCTTTATCACAGCACAGAATTTGAAATCGCATAAGACGGTGTGCCAAAACGCCACCACCACTGTCGATCCTCGCAGCGGATCTTCAGACGGCAGAGGCATGGCTTCAATCACTTCCAGCAGAGCACCAATTCTGCTGGTATGCGGATTCTGTAACAAGACGTTTTACAGCAGGACATCTTTTGAGGTGCACTCATTGGAGCATACGCAGAAACGAGATATGCATATACACTATACTTGCGTGGCTGTCACCGCTCTAACGAGGGTATATATCTGCAAAGTATGTACAACCATGTGGCAATCTTTACAGAGTTTCGAGGAGCATTGGCTGACTCATGGCGTACTgcaggaaaaatatatatgttctcGCTGTCAAAATCACTACAATAGTATCGATCTGTTCCAGAAACACACAATCACAACACACAGCGACAGCGAGATACAGCAGTTGCCAATCACATGCGAGGTAATCTATCGCGATATCAGTGACCAGAGCTCCAAAACGAATCCACAAAAAAGTACTGTAGATGATCTACCTTATATGGATCTGAGTTGTTTTGATGGCGGAAAAGATGACGCTGAGAAAATTGCAAATGATAAACCATGCGAATCGCAAGAATTAACTGACTTACCACAAAATTCGCTGGAAAAACTCTTATTTGGGAACCGACCCACGCAAGTCAAAGCAATGATATCGCCAGAATTATCAGAATGCTCTAATAAAGAAGTACAAGCAACCAAGAATGTCCCGCAGGTTCCGGTGCAAATTCCCTCATCCAATGCCGCAGTTGCGCAATCAAAACGAAGCAGCAACAGTAATTCAGGGAATATCAATGATGACTCGGATGAGGAAGAGGAGCTAACGATAGTATTATCGGAAAGCGAAGAGAGTTCGGTATCGAACGGGGTTAGGAAAAACGCTGACGGTACATCTTCCACTAAGCATCAGAATGcgcaagaaaaaacaaaatcaacGACGTCCGAGCCTGCTGTTACTGATGGGCAGATGCAGTGTTCCAATGACGCAGTTTCGGTCGATGCATCTGCGAAAACCTTGAACGACGTGAGTGAAAGTGCGAGTTCAAACGCCCGAATTAGCGTAATAACTCCGAGGGAGTCTGTGAACACGCAGCTGAGCACGAATGCGAACATTTCGAAGAATAAGACACTTGCATGCAGCACGAGTGTTAGCTCGACAACGGAGACGCAAATCGATCATGCGAACAAGACCCTTGAAAACAGTGTAGATCAGTCGGTATCATCAGACACGAATTCTTCGAGAGAGGAACCCAAGGAATCGTTACCAAAGAATGTCATGAGCGCCGTACCCAAGTCCTTCCTGCGCGTGAAATCCTTGGCAGAGCTGACAAATACTCCCCCATCGGAGAATCAGTTCTGTGGGGTGTGCGGTCTATCATTTGAGTCCCGGCACAAATTGAGGGGACACATGGCGAAACACAATCACCAAGGCAAACAAAGTGGGCAAGCATCCTTGTCTGACAATGTGCCAGTCTGGCCGGCGAAACCGACGTTTAATCCCCTGGCACATATACCCACGACATCAACTCAGGATCGTCTTATTTCTCCACTAGTGCCGATCAACAACGTGTCTCCATCCGTCAGCGCGCGTCCGCATCCACCTACTCGAGTGATTGACACGACCAACTCTCGACAATATCAAGTGGTCGGCGTGAAACCATTGCCTTCAGTCAAGTCTAGCACAATTACAGACGCATCGAAACCGAAAGAGCCGCTACCTCATGAAATAACATCTGTTCCATCGTTAAACAACGTTACTTCTACGATATATCGGCAGAACATCCCTCAGAAGACGGCTTACCATCAAAACTTGCCACCTCATATCAGCCATCCATTAAACAAATCTACTCAACAGCAGCAGAGTACTGGCATGTCTTACCAGATGACATCGAATAACATAATACCAGCGAACGCAGACAACGTTATGGTCGTAGCCGTGAATACAATGCAACAGGTCTCGAAGGATCCGGAACGTTACATCTGTTTATACTGTCCAGGCTTTGAATGCGGCTCGGTACAGGAGTTTGCATTACACGAGCATTCACCGAAACACGAGGCTCGTAGCCATTATAATGGCGTTGCTTATGTACCTCAAACGTAA
Protein Sequence: MDISDEELFDATPSCSTSTTNTSLNLTEQTKNLTQNPIQEKDCNSILTKDISVKLTRLPNVKKERTNSHSFKSKKRRYTWKYGFLKGTQFYKREKKASSKSSKSQQAFRNMESTEVKSGPSENGVNEQIPTHLYNQSYKAGESYGDAQQNKQTAQKETKNFILSTCQVQEENLCTDETNVCARTLPFKFYRKNSITSNNVNAIKCSDSLLSPSKNKNTESSSHSDKFYLSDSLSPKAKKRLIHTRLKFMAKRMGKQLDEWKFKRKSVTSDSETDEQLIPKRIRRRLSSNDSDNEDATINSIEVIGNNNQNESHLSLKKIDEKETNIQISRTVRVILTRLEEMEDEEVIKWRESKTKPSDIIASEPVEEQQLDRRKLVRNLVTLESRDKLILPKEDRVLEMKDIPNDPPLITTNNCIERRYAKSKLNKLRKKYKLFKKPRVLMIKLDTLQCSSKNGRYSAIQIDCLTKKYVNFVINVNFHYKSHGLKMYRHVHLRRSMSDVNTTYSEDHNASPSVSRTQNTNTRFKPPGFTEESSMKDVEATENNDENVPFKIHRKFARIQNRHKASSSGISEKKNNTLSPKRLEIWRNAFRTLMITEKSQKPTASMQSTSISKTLHISRNSPKKSINAECESVITPSTPTSSTKHNTPVGSPRKLASSKKQTEASTKPTGCDDTSKLESFIRHENLPNDANVEQIISRSDFTQSKDSTVSKSPRKNAKDADVTISDTSLNSSKKISKLHEKANNLELSTNDVIPVKSKTSEVCGVEQLSHKKERAYRCHLCDASFKNDELLLKHMAMNLYKSCAVVNPTSSDASKCMEASMSNETITNKKHSQNLENSKLSTLQQQCSSVNSESSSHQLDKSVIDSDMEIPSLSSSSSSSRGSKTRREHFRIPQRKTKTRSTAKSKSDLNLDSSNREEILESKNRSINMKLKRATCKICLQVFDTQAQLLQHMFKHFANDLRNMYTSIENKLDSEHQEPNENNNQVSDDSTENSVEAAVGEAVEVAENNINEQEKNLPENTNESSAENLVASEVSQHDATKEGNEASNLSSAEFTKERDLGKQLTSVASNAEHKATKVQCAEKEKSCVAGPSLELQPMKSFTICACHRPKTNRTTGTNVQIEIVLLCTTCQTLFRRFECFESHCTPRSAEGTLCGKNRRNGRKSKLLCVSCQQMLNSVQDLWHHLVMHSRLNRTGTATFYCNICKVIFYGLGQLFYNHFQNHAKNPFFLASRLSFPRPSYIGSKLIKLPATDNDKSIEVYMQVADYVCNECRTPFITAQNLKSHKTVCQNATTTVDPRSGSSDGRGMASITSSRAPILLVCGFCNKTFYSRTSFEVHSLEHTQKRDMHIHYTCVAVTALTRVYICKVCTTMWQSLQSFEEHWLTHGVLQEKYICSRCQNHYNSIDLFQKHTITTHSDSEIQQLPITCEVIYRDISDQSSKTNPQKSTVDDLPYMDLSCFDGGKDDAEKIANDKPCESQELTDLPQNSLEKLLFGNRPTQVKAMISPELSECSNKEVQATKNVPQVPVQIPSSNAAVAQSKRSSNSNSGNINDDSDEEEELTIVLSESEESSVSNGVRKNADGTSSTKHQNAQEKTKSTTSEPAVTDGQMQCSNDAVSVDASAKTLNDVSESASSNARISVITPRESVNTQLSTNANISKNKTLACSTSVSSTTETQIDHANKTLENSVDQSVSSDTNSSREEPKESLPKNVMSAVPKSFLRVKSLAELTNTPPSENQFCGVCGLSFESRHKLRGHMAKHNHQGKQSGQASLSDNVPVWPAKPTFNPLAHIPTTSTQDRLISPLVPINNVSPSVSARPHPPTRVIDTTNSRQYQVVGVKPLPSVKSSTITDASKPKEPLPHEITSVPSLNNVTSTIYRQNIPQKTAYHQNLPPHISHPLNKSTQQQQSTGMSYQMTSNNIIPANADNVMVVAVNTMQQVSKDPERYICLYCPGFECGSVQEFALHEHSPKHEARSHYNGVAYVPQT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00128578;
90% Identity: iTF_00126341;
80% Identity: -