Aful012101.1
Basic Information
- Insect
- Aphaenogaster fulva
- Gene Symbol
- -
- Assembly
- GCA_003063765.1
- Location
- NJRO01000991.1:12935-37743[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-07 0.00066 19.7 0.0 1 39 250 288 250 293 0.86 2 2 1.2 1.3e+03 -0.4 0.0 18 44 843 869 843 870 0.88
Sequence Information
- Coding Sequence
- ATGAAGGTATCTATGAACGGTCTAACCTCCTTAATTCGAGAAGTCATTCAGAGGCTAGATGCTTTGGAAAAAAATAGTGTATCTTTAAAAATGCAGTCTGTTCTGGACGAATACAACACTCTGGTCGGAGTCTTTCCGATTAAAACTGTAGCTAGCCTTGAAGAAGTAGAAagtcaaattgaaaataattctgccttcaaagaaaaattgATAACAAGTCTTACGCAAGTTAGCAGTACGGATATTAAAAAAACGGTCCGTAATATTTTGCATTACCTTATAACTGATGAAATGGCTCAACAGTACAGTTGGTTAGGACAAAGACACAAGGCTGCatttcaaattttgcaaatatctaaaattttaacacATGCCGATGCATTTCTGATAGCAATAACGGGTGATACTGATCATAATTACGTTGTATTCCAACGTTTCGCCGGTGAGTGTTCCAACACGATACTTACCATCTTGTATCGGTTGGGACACTGCGCGGGTGACAATCGCTTAATCGGAATAATTGTGGATTGGGTGTCGATAAGAGAAGAGTGCAGCCACCATGAGGAGGATGAGGGTGGCTATATTGCCGCCTTTCGACAAGCCGAAATGCAGCGGCCAGCGGATCGCATTGCCGTGGTACGACCAATTGTTCGGCTTGGTGTTAGACGCCGTGCTGAAGAAGAGCCAGAGGATATTACCCTGCCcatgCCTCGTATGTATAAAAGAACGACAGATAAGAATAATTGGACTGAGGAATCCTTAAAGTTAGCGATTCACACTGTGAAAGTCGATGGAAAGAAAATCAGATCTGCTGGCAAGGAGTTTGGTATTCCTGAATCGACTCTTAGAAAGCGTTTGAAAGAAGATTCCATAAGTCATGTGCCATTGGGTCGAAAGTCAACATTTGATGCAGCTGATGAGAAAGAATTGGCAAGTCATGTCCTATACTTAGCAAAACTATTTTATGGACTTACTCCACGTGAGCTTCGTAGAATTGCTTTCGAATTTGCGgaagcaaaacaaattaaacataggtttaataaatctgttAAACTGGCTGGCAAAGATTGGCTATATCTATTTCTTCAGCGCAACCCGGAAATATCTTTAAGACAACCGGAAGGAACGAGTCTTAACAGAATTAATGCGTTTAATAAAGAAGAAGTTACGCTATTCTTTTCCAATTTACAACAAATCATGGACATGTATAGATTTCCTCCAAATAGAATTTTCAACATGGATGAGACGGGCATTACTACGGTCCAACAAAAATGTCCAAAAATATATGGCGAAAAAGGGGCAAAGAGAATTGGTGCAGCAACATCAAATGAAAGAGGACGAACCATTACAGCAGTGTTTTGCGTAAGTGCATCTGGAACGTACATACCTCCAATGCTAATTTACCCAAGAGTACGAATGTCTCCGCATCTACAAAATAATGGGCCTATTGGAGCAATTTATGCTTGTTCTAAAAATGGATGGACAAATAAGGAACTGTACTTGGACTGGTTACGTCATTTTAAAAGTCATGTTAAACCGACTCATGAAGATCCCGTCCTTCTGATAATGGATAATCACTCGAGCCATATTTCATTAGAAGCTTATGATTTATGTAAATCCAGTTTCATTCATGTACTTTCTCTCCCCCCTCACACATCTCATCGAACTCAACCTTTAGATTTAACATTTTTTGGCCCATTGAAGAATGCTTTATACAGACAATAcgatttttacttaaattcgactggtcataaaaaaattacggaATATGACCTTGCAGCGCTATTAAATAAGGCATTTTTAAAAGTAGCTACAATGGAGAAAGCCATATCTGGCTTTTATGATGAAGATCCTGTGGAGGATGAGggtgtcgacgacgacgacgatgacgacgacaacgggGGTTTACTCCGTGTAGTGAGCCCATTCGACGAGGAGATGATATTTACGccggTGGAAAACAATGAGTTGGCAAGGACGGGagaggagaaggaagaagaggatgaggaggaggaggaagaagaagaagaggaagaggatgaggagcgcgaggaagaggaggaggaggaggaagcgaTGCAAAGAGGGGGTGGCGGTGAGGCTGTAcaaataaatcatcttcgacaggaggaggaggaggaggaggagcagcagcagcaggaacaggaacaacaacaacaacagcagcagcagcaaccgcAACAAGAGCAGCCACAGCCGCAGCATCAGGTCggagattttaattatattgtacttGAGGCGGAAAACGAGCGTAGATTTAGGCGTTTTGCAATTCACGGAAGAGAGGCTAATTTTAGGATACGTCACCCGCCCGAAGGTGCCGTCGTGGTAGAATGGTTAGAAAACGCGTTTCGTGAAATTCACGCGTATGCGTTAAATTCCTACGCTCCACATAATTACATCGGATTAACGTTCGAGTCGCCGAATTTAACGCATGGACCGGCGGGGCTGTCGTTTCGTCCGGCACGCGACTTGACTCACAAGGATATCTGGGATCTCGTGAGTTCAGTAGCGCAAAGTGCCGGAGGATTCGATATCGCGGAGAATTTTCTCGTACGCGTTTTCAACGTCGCGGTACCTGCGGGACGTGGTAGGGTATCGAATAGGCTAACGCGTGAAGACGTCGCTAAACGTTCGATTTTACAAATCCAAAATAGCGATAACCTGTGCTTTCCTCGCTCTCTCGTAGTGGCGCGTATTTATCGCGAACGCGGGAATCTTCGTACGGGAGAGCGACATGAAAGATGGGAGCAAGTACGATATCGGAGTTCCTCGTTACAGCGTGAATTAGCGTTGGAATTAACGAGGAGTGCCGGTATCGCGATCCCCGAGGAAGGTTGCGGGATTTGTGAAATTGAACGTTTTCAACGGTTTCTCGCCGGTGAAAATATAGCTAtagttgtatataattttagtacGTTTGGTCGCGGCGAGAAACCGTTATACGACGGCTGCGCAATATTAGCCTCGCTAGGACGTGAACCCTCCTAtcgtttaaatattatgtattacgaGGTTTCACGTCATTATAACccgatattaaatttgaatgcCGCCGCGGGTAGTAGAGGCCGATATTGCGTAGCGTGTAACATAGAGTATCGGAACCATAGAGGACATTACTGTATGAACAGGTAtcctttcataaattttatggCAACGATATCCATATTTTCAAGAAGGAATGtagacaaaatttttctaaagtaa
- Protein Sequence
- MKVSMNGLTSLIREVIQRLDALEKNSVSLKMQSVLDEYNTLVGVFPIKTVASLEEVESQIENNSAFKEKLITSLTQVSSTDIKKTVRNILHYLITDEMAQQYSWLGQRHKAAFQILQISKILTHADAFLIAITGDTDHNYVVFQRFAGECSNTILTILYRLGHCAGDNRLIGIIVDWVSIREECSHHEEDEGGYIAAFRQAEMQRPADRIAVVRPIVRLGVRRRAEEEPEDITLPMPRMYKRTTDKNNWTEESLKLAIHTVKVDGKKIRSAGKEFGIPESTLRKRLKEDSISHVPLGRKSTFDAADEKELASHVLYLAKLFYGLTPRELRRIAFEFAEAKQIKHRFNKSVKLAGKDWLYLFLQRNPEISLRQPEGTSLNRINAFNKEEVTLFFSNLQQIMDMYRFPPNRIFNMDETGITTVQQKCPKIYGEKGAKRIGAATSNERGRTITAVFCVSASGTYIPPMLIYPRVRMSPHLQNNGPIGAIYACSKNGWTNKELYLDWLRHFKSHVKPTHEDPVLLIMDNHSSHISLEAYDLCKSSFIHVLSLPPHTSHRTQPLDLTFFGPLKNALYRQYDFYLNSTGHKKITEYDLAALLNKAFLKVATMEKAISGFYDEDPVEDEGVDDDDDDDDNGGLLRVVSPFDEEMIFTPVENNELARTGEEKEEEDEEEEEEEEEEEDEEREEEEEEEEAMQRGGGGEAVQINHLRQEEEEEEEQQQQEQEQQQQQQQQQPQQEQPQPQHQVGDFNYIVLEAENERRFRRFAIHGREANFRIRHPPEGAVVVEWLENAFREIHAYALNSYAPHNYIGLTFESPNLTHGPAGLSFRPARDLTHKDIWDLVSSVAQSAGGFDIAENFLVRVFNVAVPAGRGRVSNRLTREDVAKRSILQIQNSDNLCFPRSLVVARIYRERGNLRTGERHERWEQVRYRSSSLQRELALELTRSAGIAIPEEGCGICEIERFQRFLAGENIAIVVYNFSTFGRGEKPLYDGCAILASLGREPSYRLNIMYYEVSRHYNPILNLNAAAGSRGRYCVACNIEYRNHRGHYCMNRYPFINFMATISIFSRRNVDKIFLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -