Aful017606.1
Basic Information
- Insect
- Aphaenogaster fulva
- Gene Symbol
- -
- Assembly
- GCA_003063765.1
- Location
- NJRO01002478.1:7131-8513[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.8e-12 9.1e-09 35.3 0.0 2 43 67 107 66 109 0.91
Sequence Information
- Coding Sequence
- ATGCCAGCCAAAGCTAAGAAGAAAGAGGATGCtacaaaaaataagaagaagaaagaaacatTGAGTAGTGTTGTGAAAAGAAGTGACAAAAGTGAGGTGAAGAGTACAGTTAAAAGTAAAGTAGTGGTCAAGAAAGTAGAAAAGAgcaagaagaaggaaaaaggatggaagaagaaggagaaaagAAAACAGTACTCTCATGAATCACTAGAGAAGGCTCTGCAAGCAGTTAACAAGGACATGTCATACAGGAAAGCTGCAGAAAAGTTTGGCGTACCGCCAACTTCTCTTCATAGGACTGTAAAAAAtccttataaattaaaatcaaaaaatgGTCCCTCTACAGTTCTACCTGCAAATTTAGAACAGAATATTATTAACTGGATCTTGTATCGAGCAGAAAGAGGAAACCCAGCTACGAAAACTGAGTTGTTAGATTCTGTGCAAAGTTATATACAACTAGAAGGGACAAAAACTCCCTTTATTAATGATAGGCCAGGACGACACTGGTACGAGAAATTCAGGAAACGACATCCTGAAATAACTCTCAGGACACCTCAGCATTTGAGTATGATTCGGGCTTCTGTTACTGAAGAGGTTATAAGAGGCTGGTTTGAAGAAATTGGATCGCACTTGAAGAACAAAAATCTATTAAGCATTCATGCATCAAGAGTCTTCAACTGTGACGAAACAAATATACAATTTGTACCAAAATCTGATAAGGTCTTAACAGAAACAGGAGCAAggaattcatataaaatatttgatggcTGTGAAAAAGAAAGCCTTACTGCTTTGTTTATGTACAGCGCTGATGGTACGCGAGCTCCTCCAATGATCATGTTCAAGTACAAAAAAGTTGTaccatcaaatatttttaaaaattgcccaGTAGGTTGGGGTATAGGAAATTCAGAAAATGGATGGATGACTACCGAAACATTTTATGAATACATAACTAATGTTTTTTATCCTTGGTTAATAAACGAGAATATTGAGTTCCCCATTATTGTTTATCTTGATGGTCATTCGTCGCATGTCACCATCCCTTTGGTATCATTTTGTAGAGAAAGGCAAATAGAGCTTATCGCTCTATTCCCTAACGCAACCCACATTATGCAGCCTCTGGACATCGCTCTTTTTCATCCTTTTAAAGATTTGTGGGGCAAAACCATCATGAAATGGAAGGCTGAAAACAGAATTTCAAAGCTGAAAAAGGAACATATTCCTGTAGTATTGGAAGAAgctttaaatttattcgataatgAGAAACAAATCATTCAGAACGGATTTAAAGCAACTGGCTTAATGCCTTTTAATCCTGATGCCATTGAGTATAACTTttacacaaaaagaaaaaaaccaaGAAAAAGGATCAAGTAG
- Protein Sequence
- MPAKAKKKEDATKNKKKKETLSSVVKRSDKSEVKSTVKSKVVVKKVEKSKKKEKGWKKKEKRKQYSHESLEKALQAVNKDMSYRKAAEKFGVPPTSLHRTVKNPYKLKSKNGPSTVLPANLEQNIINWILYRAERGNPATKTELLDSVQSYIQLEGTKTPFINDRPGRHWYEKFRKRHPEITLRTPQHLSMIRASVTEEVIRGWFEEIGSHLKNKNLLSIHASRVFNCDETNIQFVPKSDKVLTETGARNSYKIFDGCEKESLTALFMYSADGTRAPPMIMFKYKKVVPSNIFKNCPVGWGIGNSENGWMTTETFYEYITNVFYPWLINENIEFPIIVYLDGHSSHVTIPLVSFCRERQIELIALFPNATHIMQPLDIALFHPFKDLWGKTIMKWKAENRISKLKKEHIPVVLEEALNLFDNEKQIIQNGFKATGLMPFNPDAIEYNFYTKRKKPRKRIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00129657; iTF_00128891; iTF_01408088;
- 90% Identity
- iTF_00128891;
- 80% Identity
- -