Basic Information

Gene Symbol
grh
Assembly
GCA_003063765.1
Location
NJRO01000004.1:1339559-1356771[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-63 3.5e-59 200.2 0.0 24 221 334 532 320 534 0.92

Sequence Information

Coding Sequence
ATGAGCCAAAAGCTGCTGGTGCAGGAAGCGCCTGGCTCCGGTTCCGCCTCGACGAATCGCATGGAAGGCGGCGAAGGTGCCGGAGGAGGGGAGCTACATCACTTCCTTCAGTACAACCAGCAGTCCCACAGTCCTAGCCAGAGCCTACAGGGTGGCCTTCCGCTTCCGCTGAGCCCGCAGCCCCTGCGACACGACGGTGCCTCGAGCGGCGGCATCGTCGGGGTCAAGAGGGAACCAGAAGACCTTAGCTCATCGCGCGGGGGCCAGCAGTCCAACAAACGACACAAACAGACGCAACCGGACAGTCCTACTCCGCCAGGAATGTACCATCATCATCAGCATCAGTTGCAGGTGCAGCAGTACGGCAGCCCTTACGACCCCTACACGTCCTGCAGTCCGAGGTTGCAATCGACCGGGTATACATCAACATCAGCGACCGGGGCCGGAAATGCGACGGCGAATCAGGGTGGCGGCCTCCATCAGGAGGCGACGACGGTCTACGTCGCCGGAGACGCGTTGCCGCCGCTCGCTTCGTCGAGCTCCACCTCATCGCTGTCTACCACAACCGCTTCGTACACGAGGTACGAGGTTGTGCCGAGCTCATATGCTACGACACACGCGATACGTTCGACGTCGAGCAGCAGCAAAGTCCTGACCGTTGATCTTCCCAGCCCCGACTCTGGTATAGGTGCCGACGCAGTCACGCCCAGGCAGGACCATCATCCGACCACGGCTCTTCATCAGTCCTCGTTCGACTACACAGAATTGTGCCCCGGCGGAACTACAGCCGGAACGGCGGTGGTCCTTGAGAGTGGCGCGGTGATACATCAACCCCTGCAACTGCAGCTGCAGCAGAGCCACGCACAAGCGCAAGTACAACGCAGCAACTTAGTATCCGCGGGTGCGACAAATCCGAATCCAAATCCAAATCCGCAGAGATCACGGCCTTGGCACGATTTTGGCAGACAGAACGACGCTGATAAGATCCAGATACCGAAAATTTTCTCGAATTACGGATTTAAGTACCACCTGGAGTCGCCGATCAGTACGTCACAGCGCCGCGAGGATGATAGAATAACGTACATCAACAAGGGCCAATTCTACGGGATCACGTTGGAATATGTGTCCGATCCGGACAAGCCGCTCCTCAAGGCAGGGCAGACAGTCAAGAGCGTAGTAATGTTGATGTTCCGAGAGGAGAAGAGTCCGGAGGACGAAATCAAATCCTGGCAGTTTTGGCATGGCAGACAGCATTCGGTCAAGCAACGGATTCTTGATGCTGACACAAAGAACAGCGTCGGCCTGGTGGGTTGCATAGAGGAAGTCGCGCACAATGCGATTGCCGTTTACTGGAACCCACTCGAATCGTCGGCGAAGATAAACGTCGCGGTGCAGTGTCTCAGTACCGATTTCTCGAGTCAGAAAGGCGTGAAGGGTTTGCCGCTGCATATCCAGGTCGACACATACGAGGAACCGCCCcccacgcacacgtacacgccGCCTTCCCATCGGGGCTACTGTCAAATTAAGGTCTTCTGCGATAAGGGAGCAGAGAGAAAGACCCGTGACGAGGAGAGACGCGCGGCTAAGAGAAAGATGACGGCGACCGGCAGAAAAAAGCTCGACGAGCTTTATCACCCCGTCACGGAGCGTAGCGAGTTTTACTCCATGGTCGATCTGCACAAGCCGCCTGTGCTGTTCTCCCCGCCGGCCGAACACGCCATCGATAAGTTCTCGACGATGGAATTGTCGGGCTTCtacggtggtggcggcggcgggggCGGGGGGGACACCGACACCTCGTCCCTCAGTAATGGTGAAGGTGGAGGATTGAAGGCGGCGGGGGGTAGCAGCCCCTATCCGGCGGCATGCGGCCGACCGAGTCTACCGGCCCTCAAGTTCCACAACCACTTTCCGCCCGACAATCTCAGTAGCCTGCACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAGCTGCAGGGCTCGGTGCTGCAAGGGGTGCCACAAGCCGGCCTGACGGGTGCGGTGGTGTCTAGCGTTGGTAATCGACTGCATCTGCAGCAGCAACAGCCACATCTACGCCCAGCAGACGCTGAGGAACGCGTCATGCTTTACGTGCGTCAGGAATCGGAAGACGTCTACACGCCACTGCACGTCACACCACCGACAGTCCAGGGGCTGCTCAATGCTATTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGACGACGACATGATCCGATATTACGTCGACGAGGATCTGTTCCTGCTGGAAGTGAGTCATTCGCGGATGAATCCGGACAGCGAACGCAATCCGAACAATCCGGGCTCGCCGGGTGATCCTGGCGATCCGGGTGATCCTCCTGCCGGATATGACGTCACTCTCATCGAACTACCTTCGTCGCCTCCGCATCTACCACACTCACCCCTCGCCAATTCCACGCATGCACACGTGCATGTTCACGACAACAGTAACACGTGA
Protein Sequence
MSQKLLVQEAPGSGSASTNRMEGGEGAGGGELHHFLQYNQQSHSPSQSLQGGLPLPLSPQPLRHDGASSGGIVGVKREPEDLSSSRGGQQSNKRHKQTQPDSPTPPGMYHHHQHQLQVQQYGSPYDPYTSCSPRLQSTGYTSTSATGAGNATANQGGGLHQEATTVYVAGDALPPLASSSSTSSLSTTTASYTRYEVVPSSYATTHAIRSTSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPTTALHQSSFDYTELCPGGTTAGTAVVLESGAVIHQPLQLQLQQSHAQAQVQRSNLVSAGATNPNPNPNPQRSRPWHDFGRQNDADKIQIPKIFSNYGFKYHLESPISTSQRREDDRITYINKGQFYGITLEYVSDPDKPLLKAGQTVKSVVMLMFREEKSPEDEIKSWQFWHGRQHSVKQRILDADTKNSVGLVGCIEEVAHNAIAVYWNPLESSAKINVAVQCLSTDFSSQKGVKGLPLHIQVDTYEEPPPTHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTERSEFYSMVDLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGDTDTSSLSNGEGGGLKAAGGSSPYPAACGRPSLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLQGVPQAGLTGAVVSSVGNRLHLQQQQPHLRPADAEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHSRMNPDSERNPNNPGSPGDPGDPGDPPAGYDVTLIELPSSPPHLPHSPLANSTHAHVHVHDNSNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01406994;
90% Identity
iTF_00765307;
80% Identity
iTF_00127949;