Basic Information

Insect: Aphaenogaster floridana
Gene Symbol: ct
Assembly: GCA_003063835.1
Location: NJRP01000035.1:971200-989825[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.6e-28 7e-24 84.1 0.0 2 72 449 520 448 525 0.95

2 3 1.3e-32 1.6e-28 98.9 0.0 3 77 858 933 856 935 0.96

3 3 5.4e-31 6.8e-27 93.8 0.0 3 75 1090 1163 1088 1167 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.6e-28	7e-24	84.1	2	72	449	520	448	525	0.95
2	3	1.3e-32	1.6e-28	98.9	3	77	858	933	856	935	0.96
3	3	5.4e-31	6.8e-27	93.8	3	75	1090	1163	1088	1167	0.95

Sequence Information

Coding Sequence: ATGGAAAAACAAGACGGTGCGATCAACCAGTTGGTTGAGGAGGTGTCCAGGCTACAACAGAGCCTGCAACGCCTTCAGGAGACAAGTGCGCAAGCAACGGCGCGGCTCGAGGAGGAACTCGAAGTGCGCAGGCAGCACATCAACAGACTGGAGAGCAAATTGGAACGGCAGAGGGATTATGATGATCTGAAGCGCGAAATCAGTGTACTGAGGTCAGTCGACCTTTCGCAGATACCAACTGGCGAACCTGGAAAGAGCTTAGAACATCTTCTTATGGAGCGTTTCAAGGCGCTCCAACAAGCCGAGAACCTGAAACCCTCCAATACACCCGACGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCCCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAGCAaccaccgccaccgcctccGACTGCTGCCTCCCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACTTCGACGACTTCGAGCCTCCTCTTCCCGCCACCCCTCCAGAATGTCGAGACCTTCGGCTCGTTTCTCGGTGAAGAAATCGTCGCCAATTGGAGGCGGACATTGGAAAGGTCTATCATGAaccaacaacagcaacagcagcagcagcatcaacagcagcagcaacagcagcagcagcaacaacaacagcagcagcagtcaCAGCCATCTCAATTAAGCCAGTTAACTCAACAACAACAATTGCAACAAGCCCAACCACACATGGGTTTACACCCGCCAACAACGCCAAGTAGTTTAAATCATCTTCCATCACCGGGTGCGGATCCGTCGTCCACTTCGAACACTCCGGTGAAATCGAACACACCAATCGGTACAACACCTCTGGGCAGTCTAGATGTCACTGAAAAAGCGCCAACGCCGGTATCGGGGCACGAAACGCCAGCACCTCCAACTCCATCCTCGACAACGGCCTTGACATCGCCGCCGAGCTTCCAGCCACCGACGTCGATGGTGGAAACTAGTACTCCTTCGGCTTCCATCAATGGTAGCGGTCTCACGCCCGGCATACCGAGCGCACCGCCTCCGAAGAGTCCGCCTGATCAAGAATCATGtcacaacaataataatagccATCATCTGGCGAATAACAATATTGGCGGATTGAGCGTTCTCGATACACTGAAGAGTCCGTTTCGGTTTGACGATCGAGCGTATCCCTTCCGATTCGGTGACGAGTTCGGTGCCGCTGGTATGGCCGGTCGGCTGGGCGAATCCCTCATTCCAAAGGGCGATCCCATGGAAGCGAGACTTCAAGAAATGTTGCGTCATAATATGGACAAGTACGCCTCGCAGAATCTTGACACTCTTCACATAGCCAGGCGGGTGCGCGAGTTGTTGTCGATACACAATATCGGTCAGAGACTATTCGCCAAATACGTACTCGGGCTAAGTCAAGGCACGGTCAGCGAATTGCTTAGCAAACCCAAGCCTTGGGACAAGTTAACCGAAAAGGGCCGCGACAGTTATCGGAAGATGCACGGTTGGGCTTGTGACGAGAACGCCGTGCTGCTGCTCAAGTCCCTGATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAAGGAATGCCAGCATTCGCACGTGGACCACAGGAAGGTGGTCCGCAGGAAATGAGTGACGAAAGATTGGCACATATTCTCTCGGAATCGGGCCATATGCAAATGAGAGGTGAGCACGAGGTATCGAACGACGCTGACAGCAAGAGTCCGAATAGAATCGGTTGTCCGAGTCCATTCAACAAAGACAGACTGGACAGCCAAAACAGGAGACTGAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTGGTGAGGATTTACCAAGAAGAATTGGCCAAGCTGATGGGCACGAGAGTGGAGAATCTTCGCCCGCGAGAGTTCCCTAGCGCGATTTTTCCACATTTTTTCAGTGGCACCCAGGGCGGTCTTCAAGGCATCGAGCGCACCCAAGAAGATATTCGAATGGCATTGGATGCTTATCACCGTGAACTCCAAAAATTAAATGCCGCACCTGGTCAGAATCCTTCGATGACCGGATTGCCAGGATTACCTGGATTACCAGGTTTGCTGGCACTTCAGCAACAAGCTCTTCAGCAACATCACTTAGCCGCGAACGGTGGCGGCGGTGTTCAGGACTTGAGTTTAGGCAAAGTGGATCCgcgcaataaaatgataaacgGCGTGTcggaagaggagaaagaaaagatGGAAGAGGCGATGAGACATGCCGGAAGTGCATTCTCTTTGGTGAGGCCGAAGCAAGAATCGACGGGACCTCAATCAACGCCCGGTGGTTCTAGCGCAAGTTCGCCGCTTGGTAATTCTATTCTTCCCCCTGCGATGACACCCAACGAGGAGTTCTCCAGTGCGGCGGCAGCCAGCCCTCTTCAGAGAATGGCCTCCATCACGAACAGTCTGATAAGTCAACCGTCCACTCCAACTCACCATGCAGCCAACCAAAGGCCGCTGAAAGCTGTACTTCCTCCGATCACGCAACAACAGTTTGATTTGTACAATAATCTCAACACTGAAGATATTGTGAAGAGGGTGAAGGAACAGCTGTCTCAGTATTCAATTTCGCAGCGGCTATTCGGCGAATCAGTGTTGGGTCTATCTCAGGGATCAGTGTCAGACCTTCTCGCGCGTCCAAAACCATGGCACATGCTGACCCAAAAGGGTCGTGAGCCCTTTATCCGGATGAAGATGTTCCTCGAAGATGACAACGCGGTGCACAAACTTGTCGCCAGCCAATACAAGATCGCACCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACACCTATGAAACCTATGCCGCCAACGAAACTCGTCCAAGAACAGCTTCAGAACGCAGCGAAGGCGCAGGCCGCCGCTCAAGCAGCTGCGCAAGCTGCGGCGGCACAACAGCATCAGCAGGAGAATCAGATGCAACTCGGCCCGCCACAGCAAAGTCCTCAGCATCCACAGCATCCGCAGCCGCCACCACCAATGATGTTGACTCCGCCCGGACCCCATCATCCTCATACTCAGCTCAGCATGCAAGAACTCCAAAAGaaacaacaacagcagcaacaacaaatGTCACTGCACTCTCCGCATCATCAGATGGCACCGTCGCCTCTTCGAAGTCTTCATCCGCACATTTCACCGAGTGTATACGAGATGGCCGCCCTTACGCAGGATCTCGACACACAGACAATCACTACAAAAATCAAGGAAGCCTTATTGGCTAACAACATTGGCCAGAAGATTTTCGGTGAAGCTGTCCTCGGTCTGTCGCAGGGCTCCGTCAGTGAGTTACTGAGCAAACCGAAACCGTGGCATATGCTCAGTATAAAAGGCCGAGAGCCTTTCATTAGGATGCAACTTTGGCTGTCAGACGCACACAACGTCGATCGACTGCAGGCGTTAAAGAATGAACGACGAGAAGCGAACAAGAGACGACGTAGCAGCGGTCCCGGTCATGACAACAGCTCCGACACTTCGAGCAACGACACTGCCGAGTTCTACCACGCGGCATCACCCGGCCCGGGACCCACTACCGGAAAGAAACAGCGCGTTCTTTTCTCAGAAGAGCAGAAGGAAGCCCTTAGACTCGCTTTCGCCTTGGATCCATATCCTAACGTGGCTACCATTGAATTCCTCGCCGGTGAACTCGCCCTGTCCTCGAGAACGATAACGAATTGGTTTCACAATCATCGAATGAGACTGAAGCAACAGACGCCGCATGGCCAACCGGAACCGCAGTCGCCGCGAGAACCCGGCCAACCGTTCGACCCTGTTCAATTTAGATTGCTATTGAACCAAAGACTGCTGGAGATTCAAAAGGAGAGACTGGGTCTAGGAAATGTACCTTTACCATACTCTCCGTATTTTAATCCCAACCTAGCGGCTCTGGTAGGTAACGCACTGAAAGAACAATGCTCCGGTCTTGACCTCTCGATGAATGCTCTGAAGAGGGAACCCAATCAAGAGTTCGAAGACGAAGACGTCGATGACGCGATGAGTAATCTAGGTAGTGAAGATTCGGAAGGTTCAGCCAGCAGTATAAAAAGGGAACCCACAGAAACGCCGACGGCGCCCACGACGGTTAGGTCTAACAGAAGAAAACCCGCGGCCCCGCAATGGGTAAATCCAGAATGGCAAGAACCAACGAGAGCGGGCGACGAAGTCATCATCAATGGTGTTTGCGTGATGCAGACGGATGATTATGGAGTGAAGAGAGAGGCCGAGGAAACCATAAGAGTCGAGCCGACACCGGTACAAGACCGATATGAAGAGGATGCGCAGAGCGATGTCTCTTCTGTGTCAGGCAACAATGGGGCCGATCGGGATAGCCCGCTTCCCAGTCCAAAGTCTGGTCAGAACAGTCCAACGACGTCGCTCAGACCGCCGTCGGCACAACAGACGCAACAGTCCACGGAGGAAAGTCCAAAGGACGTGGTGAAACACGAACCGGAGGAAACGTGGGATTACTAG
Protein Sequence: MEKQDGAINQLVEEVSRLQQSLQRLQETSAQATARLEEELEVRRQHINRLESKLERQRDYDDLKREISVLRSVDLSQIPTGEPGKSLEHLLMERFKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPPTAASLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQHQQQQQQQQQQQQQQQQSQPSQLSQLTQQQQLQQAQPHMGLHPPTTPSSLNHLPSPGADPSSTSNTPVKSNTPIGTTPLGSLDVTEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETSTPSASINGSGLTPGIPSAPPPKSPPDQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRAYPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRHNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVLLLKSLIPKKEYVSGKEQGMPAFARGPQEGGPQEMSDERLAHILSESGHMQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGTRVENLRPREFPSAIFPHFFSGTQGGLQGIERTQEDIRMALDAYHRELQKLNAAPGQNPSMTGLPGLPGLPGLLALQQQALQQHHLAANGGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSSAAAASPLQRMASITNSLISQPSTPTHHAANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAQQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSLHSPHHQMAPSPLRSLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPTTGKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVDDAMSNLGSEDSEGSASSIKREPTETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRAGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPTTSLRPPSAQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394913;
90% Identity: iTF_00982081;
80% Identity: iTF_00126589;