Aflo019130.1
Basic Information
- Insect
- Aphaenogaster floridana
- Gene Symbol
- kn
- Assembly
- GCA_003063835.1
- Location
- NJRP01000045.1:567775-575160[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.1e-119 9.5e-116 387.9 7.8 205 562 1 361 1 370 0.77
Sequence Information
- Coding Sequence
- ATGAGACGTTTCCAGGTGGTCATATCTACGCAAGTGGGAGTGGAAGGACCATTACTAGCGGTCTCGGACAATATGTTCGTCCACAACAACAGCAAGCACGGGCGCAGGGCGAAACGTTTGGACCCCAGTGATCCTGGCGAGTACAATAGTCTATATCCGCCAATACCTCTCCAAACGCCGTGCATAAAAGCGATATCGCCTAATGAAGGTTGGACGTCGGGAGGATCCACCGTCATAATCATCGGTGAAAATTTCTTCGACGGATTGCAAGTAGTTTTCGGATCGATGCTTGTTTGGAGCGAGTTTATCACTCCACACGCAATTAAGGTGCAGGCACCAGCACGGCAAATACCCGGAGTCGTTGACGTCACGTTACATTACAAAAGCAAGCAATTCTGTAAAGGAGCACCCGGTAGATTTGTCTACGTTTCGGTAAACGAACCCACGATCGACTACGGCTTCCAAAGGTTACAGAAACTCGTTCCGCGGCACCCCGGTGACCCCGAAAAGCTTCCAAAGGAGATAGTACTGAAGAGGGCGGCGGATCTAGCGGAAGCCATTTATAGTATGCCCAAGAGCGGAAACATGGGGATCGCGGGGGCACCCAGAAGTCCGGGTTCAGTGCACGCACCCGCACCTCCTACATCCAGTTCGGCAACGGCCTTTAATTCGTATACGGGGCAACTTGCAGTGACGGTGCAGGAAAATGGTAGCACGGCAAAATGGACGGACGACGGTAGTTCCGTGACGACAGGAGCTGCTGCTGAcggaggaggcggcggcggcggcggcggtggcggcagcggTGGTAGTGTCGGAGCCAACGTCGGCGGTAGTGCCGACGCTTATAGACAAAGCAGCAGCGCAAGTCCACGTGGTGTCGTAACCGGCGGTGGTTATTGCGGTAGTTCAGCCAGCACACCACACAGTCACAGTACTAACGGAAGTTATTCTGTCGCCAATCCCTACACTGGCAGTCCGACTCTCTACACGTCGCCGCACGAACAATATGGCATATTCTATACATCCGGGGACGGGAGTGCGTTCGCCCCCGTAGTACGACCACCGACCACCTCAGTCCCACCGCACTGGCCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
- Protein Sequence
- MRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYPPIPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSEFITPHAIKVQAPARQIPGVVDVTLHYKSKQFCKGAPGRFVYVSVNEPTIDYGFQRLQKLVPRHPGDPEKLPKEIVLKRAADLAEAIYSMPKSGNMGIAGAPRSPGSVHAPAPPTSSSATAFNSYTGQLAVTVQENGSTAKWTDDGSSVTTGAAADGGGGGGGGGGGSGGSVGANVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWPTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01417498;
- 90% Identity
- iTF_00765327;
- 80% Identity
- iTF_00127233;