Basic Information

Insect: Aphaenogaster ashmeadi
Gene Symbol: -
Assembly: GCA_003063805.1
Location: NJRQ01000024.1:24874-32456[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.9 3.3e+02 2.5 0.2 1 23 162 187 162 187 0.94

2 17 9.3 1.1e+03 0.9 0.4 3 23 202 223 201 223 0.76

3 17 7.5 8.5e+02 1.2 4.3 1 23 229 251 229 251 0.96

4 17 0.00054 0.061 14.2 0.3 2 23 257 278 256 278 0.97

5 17 1 1.1e+02 4.0 8.6 2 21 557 576 556 579 0.94

6 17 2.2 2.5e+02 2.9 1.0 1 23 645 667 645 667 0.82

7 17 0.61 69 4.6 1.3 2 23 844 865 843 865 0.96

8 17 0.31 35 5.6 0.2 3 23 882 902 880 902 0.97

9 17 0.0095 1.1 10.3 0.2 1 23 910 932 910 932 0.98

10 17 0.45 51 5.0 1.1 2 23 1031 1052 1030 1052 0.95

11 17 0.13 15 6.8 0.7 3 23 1064 1084 1062 1084 0.96

12 17 0.0031 0.35 11.9 0.2 1 23 1161 1183 1161 1183 0.98

13 17 0.035 4 8.6 0.3 1 23 1258 1280 1258 1280 0.97

14 17 1.7e-05 0.0019 19.0 0.8 1 23 1286 1308 1286 1308 0.97

15 17 0.0061 0.69 10.9 2.6 1 23 1372 1394 1372 1394 0.97

16 17 0.00085 0.096 13.6 1.7 1 23 1400 1422 1400 1422 0.99

17 17 0.76 86 4.4 1.0 2 23 1517 1538 1516 1538 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.9	3.3e+02	2.5	0.2	1	23	162	187	162	187	0.94
2	17	9.3	1.1e+03	0.9	0.4	3	23	202	223	201	223	0.76
3	17	7.5	8.5e+02	1.2	4.3	1	23	229	251	229	251	0.96
4	17	0.00054	0.061	14.2	0.3	2	23	257	278	256	278	0.97
5	17	1	1.1e+02	4.0	8.6	2	21	557	576	556	579	0.94
6	17	2.2	2.5e+02	2.9	1.0	1	23	645	667	645	667	0.82
7	17	0.61	69	4.6	1.3	2	23	844	865	843	865	0.96
8	17	0.31	35	5.6	0.2	3	23	882	902	880	902	0.97
9	17	0.0095	1.1	10.3	0.2	1	23	910	932	910	932	0.98
10	17	0.45	51	5.0	1.1	2	23	1031	1052	1030	1052	0.95
11	17	0.13	15	6.8	0.7	3	23	1064	1084	1062	1084	0.96
12	17	0.0031	0.35	11.9	0.2	1	23	1161	1183	1161	1183	0.98
13	17	0.035	4	8.6	0.3	1	23	1258	1280	1258	1280	0.97
14	17	1.7e-05	0.0019	19.0	0.8	1	23	1286	1308	1286	1308	0.97
15	17	0.0061	0.69	10.9	2.6	1	23	1372	1394	1372	1394	0.97
16	17	0.00085	0.096	13.6	1.7	1	23	1400	1422	1400	1422	0.99
17	17	0.76	86	4.4	1.0	2	23	1517	1538	1516	1538	0.97

Sequence Information

Coding Sequence: ATGTTTCCTGCGGCGGGCAAGGGCGAGCGAAGAAGTCTGCGCGGAAGCGCGCGACTCTCGTCCAAGATGTCGGGAAGGCTGCCCCGGTTGCGTGCACTGCGACCGCGACCGCAGCATCGGAGGCGCGCGAGAACGGAGCCCGTCGCCGTCGGCGCCGCCGCGTCTAGGCCGCAAGGTAACCTTAAAGGGGCCGCGGCGAGTCACGAGGTGGAGCACGATGCGAAGAGGTACGACGCGAAGAAGGGCGAAGAGACGGGCACGGCCGGCGCTGCGAGCAGGGCGAGCGTGATGGACGAggacgacaacgacgatgaGGTGACGATGACTGCCGTCGATGCCaccgacgaggaggaggaggaggaggaggaggacgaggaggcGACGCTGGACGGCGACGTTGATGTTGACGTCGACAtagacgtcgacgtcgacctCGCGAATCCCGGGGAGACGGTTGACGGCGAGGCGAACGACCGGGCGTCTTACGAGTGCAAGACCTGCGAACCGCCCAAAACGCTGCCCAGTATCAAGGCCTATTTCGAGCACCTGCGAAAGGAGCACAAATATAAGgGCAAAAACGGGCACAGTCCAGTCGAAAATCATTGCCCTGCGTGTTCGTATGTCGCATTGAACGTGAAAGATCTTGAAAATCACCAAAGAGTGCAacatttgaaaagaaaattctttcgATGCGCAAAATGCGATTACGTGACGCACATCAGAACGCGTTATACTAAGCATGTTAAATATCATTCTATGCCGATGATCAAGTGCGATGCTTGTGATTTTAGTTCAGCGTATAAGTGGAATCTAGAAAGACACATGCGGAATCATGGAGGTGGAGGTGCTTTCAAATGTCGTGCATGTAATTTTACTGCTGATATCCGTCAGAGCTTAACGGTGCATGAGTCGTATCATCATGACCCACCTGTGGGTCAGATCAAAAATAACGCTTTCGAACGTAAGCCACGAAATAGTCCAAAACGTTATAATCAGGTTGGAGCCAGTGACTTTCGAGAAGCATTAAATAAAGCTGGAAGTACAACCACGTCGGCCGGTTCGTCCGATTCGTTCGTATCAGATCACTCATTAATTTCAATAGACGATAAGAAAAGCGCCCTGGCCAGTGCAGAGTGCATCGCGTTAAAATGCGAAGAGAAAGGCTGCCAGTTTATAACAGCCTGGGATTCCGAGATGCAACGTCATTTAGCAGAATGCCACGCGCCGGCTATTGCATCAAAGCCAAGAAAGCCACTGCCGATGTTAATTCCGCTAAGCCTAGCAAGCACCAAGTCCAATAACTCGCTCAGCAGTAGCGGGCCGCCTGCGACCCTACTGAAGGTTCCGCGCGTCAGAGTGAGACCTGAACTGGCACAAATCGCAAGGGATACGGAGCTAGCTAAGATGTATGGGAACAAGGAGGTCGTGAATTCGAAGAAGAATACTGCGGCTGGTGTATTTGAGAGAAAGAATGCCTCCTTCTTCGATAAATTGAAGGAAAAACTAACGACGACAGCGACGTCGATTAATAACGGTGTGCCGGAGGTAGCTGTAAGTAGTGAGAACGACTTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAAGAGCTAGCTTGTCACAAACAGACACACCATACCGCGCTCAGCGTGTCCGTGGGCACGACACGGTGCCCTATGTGTAGAAGACGTTGCAAGAGTACAACCGATCTCCAAACGCATATGCAATGCTGCCATTCGCGCAACGATACAACACCGTCCATCGATAGTAGTTTAGAGAAAGTAACAAATCGCTCGGACGTCCGCATGACCTCATACCGTGACGAATGCTCTTTTCCGTCGCAAATGGATTGGGACGCGAATCTCAGAGGACTAAATTCTTCTGGATCTCCGTTTGAAGGTGGGTCGACACATCCGAGCGGGCGGCGGGTATTCAAATGTCCCCATTGTCCATTTTGGGCTTCCACCGCAAGTCGCTTTCACGTACATATAGTCGGTCATTTAAACCGGAAGCCGTTCGAGTGTTCAATGTGCGCGTATCGTTCTAACTGGCGATGGGACATCACAAAACATATTAAGCTTAAAGCGGCTAAAGACGCAGTGCATACGAGCGCCAGAGTGCTCATGACGGATGAAACAGGTCGACGGAATTATtccaaatataacaaataccTCGCACAGGTAGAACAACAATCGTGGGATGAGGATCGTATGGAGCAACGTAGCATAGAGGAAACGAACTCTGAAGAATTGTCGACAAAGTTGTTAATCGTAGGCAATAAAGAGTACGTTCCGATTACTAGTCCGGCATCACCATCTTCCGTTACGATTTTACCATCGAGCGAGGCAAATCAGAACAGTAATGTAGATATGAGTCTGCGACCTCCACCACCGCTGAAAGCAGCGATTAAAAGTCGCGGGCAGTCTCTGCTGAAGAACAGTCCTATCACGATGCATATACATACCCCTAGTGGTGGCGGCGCTGTCTCTATATCTACAGCGACGGATGAGAGTAAACGTACTCATTGGAAGTGTAAACGTTGTAATTACCGAGATACCAACAAAGACAACGTAATGTTACATGTTAAATCTCATTACGAATCTGCCGATCATGAGTCCAACGAAGAAAGGAATCCATTTGGTTGTGGGGACTGTCCGTTTTCAGCATCGGATGCTGCCACTCTGTCCCTTCATAGGATGCACCATCGGCCGAACCTAGAAGCTATATTTAAATGCTATCTTTGCCCATACTACGTTAGTACAAAGGCAGAACTATTGGAGCACGCTAGACTCCACGGGGAAGAGTTGGCAGCTATTCATCAGCAAAATATGGATGTCGAGTTTTCAAACTCCAAGAGTAAACTGCAACAAGTATCAATTTCCGAAGGCGTTTCTCGAACAAAGCGCGTAACGGCCATGGAACAAGAGATTCAGATAACATCACGCAACAACGTAACGGCACCTTCGAATACCACGGGAGCccagccgccgccgccgcctccacCGTCGCTTCTCCTGGACACCCGTGCCCTTCCAGATGCTCCGCTGGTTTGGGTATCGCGGCTAGATGGCATACTGACAAAGATGCTCAAGTGTCGTCACTGTCCATTCATCTCATCGCGACGTGCGGAGGTGCGCGACCATGAGACAATGCATGTAGACGTGCCGACTCAGGGTCCTCTGATCGCCTGCACGGACTGTAGTTTTACTTGTTCGCGTCGGGAAGTCATGATCGCGCACACGGAAATGCATGCGGGATCTCTCGGTACCGTTCACTGTCTTGTCGACGAGACACGGCCTGATTCCCAACAAGCGAGCGATCTGGCCACCCTGCTTGGTTTGACGCACACACCCGTCCTGGGCACCGAACCTGATCTTCAAGACTCACGTCTAGTGCACTGCTGTGGCAAGTGCCCGGCGCGGTTTCTGTGCGAGAAAGAATTGCGCATTCACCTACGGTACCATACCACGGAACTAGCGTATTCGTGCCAATGGTGCTCGTACGCAGCGCGACAACCGGCGCATCTGTTGGCTCATCAAAAGGCGCATTCGACGGAGTATCAGGAGCGTACCAAGTACCTGTTGTCTTTGTACGGTCACTCGCAGCGTTATCCGCCGCCTGCGACAGCGTGTGTCGAGGCAGAGAATAGAGAAGACAATGACAATGCACTGAACGTCGCATGGATCGTCGTCGAGATAAATGAGAGCGCGAACAGCTATAACAGTGTCAATGGCACCACGGCAACTGTTCAAAGGACCGGGAATCAGGTGTTCACGTGCGCGAAATGTCCGGCTCGTTACTTCAAACTGGATGCTTTGGAATATCACATGACACTTCATGGTTCGAATAATCGGTTCAAATGTAATGACTGCGATTATTCATCGAAAACGGCACAAAATCTAATGAAACATCAGGTGGTACATCGACGACATAGCGAGACCAACGAAGTGACCGCGGAGGCATCGTCTACCAATGTTGACTCCGCCCCGATATCTCCCCCCGAATCACCACTGCAATCGCCACCGGATCCACAATTCGGTATCTTTATGCGTGGCAATCCCAACTTCGTGTATCCGGGTTACCTACGGAACGGTCGTTTGAAGGAAAAGCGCTACAAGTGTCACAAATGTCCGTCCGCTTTTGAAAAACGTGAACAATATAGAATTCATTTGACTTTGCACGGTGCAAAGCAACGTTATCGCTGCGATACATGCGACTACTCGGTCAAATACTATGCGAATTACATACAGCATCTGAAGAAACATCAGGCGAATGCAGAAGCACAGGCGTCTCGCAGACAATTCGAGGACGACCGGATCTCGGTGGATAGCGATAGCATCGCCGACATGATTGCGTCAACATCGTCGCGCAAGTCCTCGCGATCGTCTGCTTCCACTGTTAACATGCTCGCAGTATTGTCTTCTAACAACGCGTCCAATGTCAATGCTGCGCTACAACCTTCCAATCAAGATAGGCAGAGTTTATTGCTGATGCAAAAGAAGGGTATCATTTCGTCGACGGGCGACATTGACGCGGAGACATTGATCCGCTGTCAAAGCTGTCCATTCTCCACCACTGACAAGGATGTCATGGACACGCACAAGCGTCGCCATGGTATCGAGCGCATGACCCCGCCGTGCCCGCATTGCGACTACATTCCGCGGAAAGACGAGAACGTTGGTGAGCACATCAAGCTGCACTTCACAAGACTGTACAAGCCCGAGTCCTATCTTATAGTCGAGTTGCTAACGCTGACGATGGAGAAGACATCCGCGAACAACAAGGACGACAAGGGTCAGCGGTTGAAGGAGCTACTGTTCAAGGAATGTGTCGACGGTAGATTCTTGCCGCTCACCGAATCTATAAACTCTCTTTCCCTAAGTACCTCCTCCTCGACGATAAAGGCTGTCAAGGAGAAGGTCATCGTAGACCCGAACACAGGCGAGACCAAGCATCGTCTTGCCACATAA
Protein Sequence: MFPAAGKGERRSLRGSARLSSKMSGRLPRLRALRPRPQHRRRARTEPVAVGAAASRPQGNLKGAAASHEVEHDAKRYDAKKGEETGTAGAASRASVMDEDDNDDEVTMTAVDATDEEEEEEEEDEEATLDGDVDVDVDIDVDVDLANPGETVDGEANDRASYECKTCEPPKTLPSIKAYFEHLRKEHKYKGKNGHSPVENHCPACSYVALNVKDLENHQRVQHLKRKFFRCAKCDYVTHIRTRYTKHVKYHSMPMIKCDACDFSSAYKWNLERHMRNHGGGGAFKCRACNFTADIRQSLTVHESYHHDPPVGQIKNNAFERKPRNSPKRYNQVGASDFREALNKAGSTTTSAGSSDSFVSDHSLISIDDKKSALASAECIALKCEEKGCQFITAWDSEMQRHLAECHAPAIASKPRKPLPMLIPLSLASTKSNNSLSSSGPPATLLKVPRVRVRPELAQIARDTELAKMYGNKEVVNSKKNTAAGVFERKNASFFDKLKEKLTTTATSINNGVPEVAVSSENDLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPMCRRRCKSTTDLQTHMQCCHSRNDTTPSIDSSLEKVTNRSDVRMTSYRDECSFPSQMDWDANLRGLNSSGSPFEGGSTHPSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSMCAYRSNWRWDITKHIKLKAAKDAVHTSARVLMTDETGRRNYSKYNKYLAQVEQQSWDEDRMEQRSIEETNSEELSTKLLIVGNKEYVPITSPASPSSVTILPSSEANQNSNVDMSLRPPPPLKAAIKSRGQSLLKNSPITMHIHTPSGGGAVSISTATDESKRTHWKCKRCNYRDTNKDNVMLHVKSHYESADHESNEERNPFGCGDCPFSASDAATLSLHRMHHRPNLEAIFKCYLCPYYVSTKAELLEHARLHGEELAAIHQQNMDVEFSNSKSKLQQVSISEGVSRTKRVTAMEQEIQITSRNNVTAPSNTTGAQPPPPPPPSLLLDTRALPDAPLVWVSRLDGILTKMLKCRHCPFISSRRAEVRDHETMHVDVPTQGPLIACTDCSFTCSRREVMIAHTEMHAGSLGTVHCLVDETRPDSQQASDLATLLGLTHTPVLGTEPDLQDSRLVHCCGKCPARFLCEKELRIHLRYHTTELAYSCQWCSYAARQPAHLLAHQKAHSTEYQERTKYLLSLYGHSQRYPPPATACVEAENREDNDNALNVAWIVVEINESANSYNSVNGTTATVQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCNDCDYSSKTAQNLMKHQVVHRRHSETNEVTAEASSTNVDSAPISPPESPLQSPPDPQFGIFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRIHLTLHGAKQRYRCDTCDYSVKYYANYIQHLKKHQANAEAQASRRQFEDDRISVDSDSIADMIASTSSRKSSRSSASTVNMLAVLSSNNASNVNAALQPSNQDRQSLLLMQKKGIISSTGDIDAETLIRCQSCPFSTTDKDVMDTHKRRHGIERMTPPCPHCDYIPRKDENVGEHIKLHFTRLYKPESYLIVELLTLTMEKTSANNKDDKGQRLKELLFKECVDGRFLPLTESINSLSLSTSSSTIKAVKEKVIVDPNTGETKHRLAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00127818;
90% Identity: iTF_00127818;
80% Identity: -