Aash022235.1
Basic Information
- Insect
- Aphaenogaster ashmeadi
- Gene Symbol
- bab2
- Assembly
- GCA_003063805.1
- Location
- NJRQ01000135.1:195909-198180[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-17 5.2e-14 52.1 0.1 1 45 359 403 359 403 0.97
Sequence Information
- Coding Sequence
- ATGAGTACGCCTCAGCACTACTGCCTCCGATGGAACAATCATCGCTCGAACCTGCTGAACGTCTTCGAAGAGCTGCTGTACAACGGGGCGTTCACCGACGTCACCCTCGCTGTCGACAGCGGTCTAACGGTCAAATGCCATAAGATCGTGCTGGCCGCATGCTCGATGTACTTTCAGACTCTCTTCCACGATCTGCCGAATCAACAGCATCCGATAGTCGTTCTCAAGGATGTTAAGTTTTCGGAGATAAAGGCGCTACTGGAGTATATGTATCGCGGCGAGGTGAACGTCGCGCAGGATCAGCTGGCCGGTCTGCTGAAGGTCGCGCAGGTGCTGAAGGTGAAGGGTCTCGCGGAGGGATACGACAGTCGGAGCGGCGTAGCGCGCGACCTTCGCCGCGAGGACACGATGGACACGTCGATGTCGCCGCCGCCGGCCATCAGCACCAGCACCGGCGGTGGCAGCGGCAGCCACTCGTCACCGCCGCACTCCACCGGCGGCTACCTCTCCTATTACGGAAAATCCGCGGTCTCGCACGACCGCGGTCAAAGTCACCACCCGAATCCGTTGTCGCTATGGTCCCTGCCACAGTTGCATTCCGGAGCGGGTCATCAGCTTCCGACGTCGCTCTCGTCCTCTGCcctcggcggcggcggcggcggcggcggtggcggtgggtCCTACGATAATGGTATCGAGACCTCGCCGCTCAAACGTCGGAAACTGCTGCACCCGCAGCCGTCGACCCTGCTGATGAACAACGACACGCCGATACTGCGCACGGTACTCGGCCAGTCTCACGTTGATAGTTCGCAGGCTATGCCGCTGCTGCAGCCGGACAGCCACGAGTCGGTGCACTATCGCACCGCGAGCAGCAACGGATCCGCGAACGATAACGACAACCGCCGCGGCAACGACCTGACCCACAGCGAGACAGTCCACCCTGACGTCACCTACATGGACGAGGACGAAAGACAGCCGTCCCCGCAGTCATACGTTGGGGATACCGTGAAAAATTCAGCTGTCGCGGACTGCGTCCAGCCGAAACCCGAGTGGAAGCGTTATAAACAGTACACCCGGGATGACATTAACGCGGCGATCGAGGCAGTGAGGAAGGGTATGAGCGCCGTTCAGGCAGCGCGAAAATATGGTGTGCCATCGCGCACGCTTTACGACAAGGTGAAGAAGCTCGGCATCCAAACTTCGCGGCCGCTCAAGCGCCCGTCGAGCAACGGAGGAAGCGGGGCCTGCTTTCCTTACGGCATCGGTGCCAACGTGAACGGCGCCGTTTACGACAGCAGTGCCAACGCCCTGTCCGAGAACGAGAACGAGGGCGGCGGCGTCAACATCGTCGAGGGTTTTGCCGGCACGAGTGCCGCGGCTTTCGACGCCGCGTACGTCAAGGCGACGAAGGACACGTCGCAGGACCGCGATTCAATAGCAGACTCGATGGCCCGTTGCAGCTCCAGTCCGGTGATACGCTGCGCTAAGCAGaaacagcagcagcaggaCCTGAACGATCAGGTGGAGGATCTATCGGTGAGTCGCAAGTCCGATGTCCCGGTGATAGTACCGCCGTCCACTACGTCGGTCGCGATTAAGGACGAGGCGCAGGAAACGGGTCTGGATAGCAGCGACTGCTGCGACTACAGCTAA
- Protein Sequence
- MSTPQHYCLRWNNHRSNLLNVFEELLYNGAFTDVTLAVDSGLTVKCHKIVLAACSMYFQTLFHDLPNQQHPIVVLKDVKFSEIKALLEYMYRGEVNVAQDQLAGLLKVAQVLKVKGLAEGYDSRSGVARDLRREDTMDTSMSPPPAISTSTGGGSGSHSSPPHSTGGYLSYYGKSAVSHDRGQSHHPNPLSLWSLPQLHSGAGHQLPTSLSSSALGGGGGGGGGGGSYDNGIETSPLKRRKLLHPQPSTLLMNNDTPILRTVLGQSHVDSSQAMPLLQPDSHESVHYRTASSNGSANDNDNRRGNDLTHSETVHPDVTYMDEDERQPSPQSYVGDTVKNSAVADCVQPKPEWKRYKQYTRDDINAAIEAVRKGMSAVQAARKYGVPSRTLYDKVKKLGIQTSRPLKRPSSNGGSGACFPYGIGANVNGAVYDSSANALSENENEGGGVNIVEGFAGTSAAAFDAAYVKATKDTSQDRDSIADSMARCSSSPVIRCAKQKQQQQDLNDQVEDLSVSRKSDVPVIVPPSTTSVAIKDEAQETGLDSSDCCDYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126087;
- 90% Identity
- iTF_00126087;
- 80% Identity
- iTF_00126087;