Asyr017152.1
Basic Information
- Insect
- Apeira syringaria
- Gene Symbol
- zfy1
- Assembly
- GCA_934045895.1
- Location
- CAKOGY010000239.1:7497-10090[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 2.1e-05 0.0017 19.1 1.8 1 23 282 304 282 304 0.98 2 11 1.1 90 4.3 2.6 1 21 311 331 311 333 0.94 3 11 0.074 6.2 7.9 0.6 1 21 337 357 337 360 0.88 4 11 1.5e-05 0.0012 19.6 2.4 1 23 367 390 367 390 0.97 5 11 0.00026 0.022 15.6 0.4 2 23 397 419 396 419 0.95 6 11 6.7e-06 0.00056 20.6 0.6 1 23 432 454 432 454 0.96 7 11 1.6e-05 0.0013 19.4 0.2 1 22 460 481 460 485 0.94 8 11 2.9e-05 0.0024 18.6 1.0 2 23 494 516 493 516 0.96 9 11 0.00014 0.011 16.5 1.6 1 23 522 545 522 545 0.97 10 11 2e-09 1.7e-07 31.7 0.6 1 23 554 576 554 576 0.99 11 11 0.0057 0.47 11.4 0.3 1 23 582 605 582 605 0.96
Sequence Information
- Coding Sequence
- ATGGGAAAGATCTTCGCGAGCTCCAAACCGATAACTGGCAAGAGAGCAATATTTGAGGTTGGTTCAATAAACCTATGTTATATATGCAGGCGTGTTGCTCAAAATTCAGAAGTGTTTATACAAAAAGTTGAAAGCAATCAGATACTATTGGAGAACTGTTTTAGGGATATATGCACTACAACAGAAGACTTCAAGTCACAACAAGAACCACCTATAGCACTCAACCAAACACCTTTAGATATTATCAGTATCACTGGAACAGACTACAATGACTGTGAAAAGACTTGCAGTGTCTTCAAAGTGACTCACAGTAATACTAAAGTGACTTGCAGTAACAATGGTGAGATTAACGATGAATCTTTGTTAATATGCAATGATGTTTTGTGTAATACACATTTAGAAGATATGCAAGTCAATTGTGATAGAAAATTAAAAAGAAGAAAGAAGGAAGATTGTATAGAAGAGCAATTTACGAATGATAAGATAAATATAAAATTAGAAATGAAAGAAGAAGATATAGTGTTTGATCATGTGGAACATGTAGACAATAATGACGATTTTCAAAATGCGTATGTAAAAGAAGAAGACGACTGCCTACTAAAACCTTTATTAAAAAAAGAAATACAAATAGAAGGCATAGAAGAAATAAGTCTAGAAACAACATCCAAAAGGAATAAAGTTACAAAGGGAGAAAGATCTAAAACTATAAGGAAGGTGATTAAACAGCCAAAAGCTTTAAATTATGATGAATCAACAGGAATAGAAAAAAATTACATAACAAAGGAAGAATGCATGGAAGAGAGAAAACAACTGGCACTCGATAAAAAATACACAAACCGTCCTTACAGGTGTGACGATTGCCTGAAAGGGTTCAGATTTAAATCCAGCTATAACGTGCACATGGAGAAGCATAGCCCGGCTGTGGGCTCCTTTATATGTGAGATTTGTAAACTTAGAATGGATACTGAAGAAAAACTGCAAAAGCATAAAAGATGTCACTCAATACGTCACAAATGCACTGAGTGTGGTATTGTGCGAAGCAATCGCGGTACCATCAAAGATCACTTTGCCGCTTACCATAGACAAGGCGAGCGGGCTTTCGTGTGTCCGTACTGCAGTAAAGCATTCAAACGTCAAACATCCCAGAGGAAGCACGTGAGATATACGCATTTGAATAAAGAACGAGTGACGTGCGCGTACTGTCTCAAAAGTTACGCCAATAAGAGTGTCCTCAAAACTCATATGATGCTGAGTCATCCGAAAGAGGTGTCGGCCCCGGCGGTGACGAAGCTGTTCCGTTGCGAAGAATGTGGCATGACTTTCATGACACCGTCGATGCTGACTAAGCACGGGACCAAGCACTCACTCACCAGGGACTTCTACTGTGTCGAATGTGACAAAGCATTCAAGTCAGAAGATGGCCTGAAACAGCATTTGAAAACTGTACAGCCTCATATCAATCATTCGGAACTGCGGCTATCGTGCCCGCATTGCGATAAGAGATTCGCCATTAGAAGAGCTCTCGACCGACATATGAACAGAGTGCATTTGGATATAAGACCTTTTAGATGCGATAAATGTGACAAGGAGTACGTGAATAATTGGTCATTGATCCTCCACAAGCGTCACGTGCACGAAGGCTACCGGAGACCCCTGCGGTACCCCTGTAAGATGTGTGATAAAGTATTCCGCCGTAACGCAAATCTCAAGGCGCATATCCGAACCCACACCGGCGAGAGGCCATACCAATGCTGCTTGTGTCCCGCGCAGTTCAGTCAGTCCGGCGTTCTCGCCACCCACGTCAAACTGATACATCTCAAACTGACGAGGGACGGCAGACCGAAGGCTGATTCTGTGAAATAA
- Protein Sequence
- MGKIFASSKPITGKRAIFEVGSINLCYICRRVAQNSEVFIQKVESNQILLENCFRDICTTTEDFKSQQEPPIALNQTPLDIISITGTDYNDCEKTCSVFKVTHSNTKVTCSNNGEINDESLLICNDVLCNTHLEDMQVNCDRKLKRRKKEDCIEEQFTNDKINIKLEMKEEDIVFDHVEHVDNNDDFQNAYVKEEDDCLLKPLLKKEIQIEGIEEISLETTSKRNKVTKGERSKTIRKVIKQPKALNYDESTGIEKNYITKEECMEERKQLALDKKYTNRPYRCDDCLKGFRFKSSYNVHMEKHSPAVGSFICEICKLRMDTEEKLQKHKRCHSIRHKCTECGIVRSNRGTIKDHFAAYHRQGERAFVCPYCSKAFKRQTSQRKHVRYTHLNKERVTCAYCLKSYANKSVLKTHMMLSHPKEVSAPAVTKLFRCEECGMTFMTPSMLTKHGTKHSLTRDFYCVECDKAFKSEDGLKQHLKTVQPHINHSELRLSCPHCDKRFAIRRALDRHMNRVHLDIRPFRCDKCDKEYVNNWSLILHKRHVHEGYRRPLRYPCKMCDKVFRRNANLKAHIRTHTGERPYQCCLCPAQFSQSGVLATHVKLIHLKLTRDGRPKADSVK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00125335;
- 90% Identity
- iTF_00125335;
- 80% Identity
- iTF_00125335;