Basic Information

Insect: Apeira syringaria
Gene Symbol: ECU03_0790
Assembly: GCA_934045895.1
Location: CAKOGY010000434.1:42439-59361[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 3.5e-05 0.0029 18.4 1.2 1 23 302 324 302 324 0.98

2 11 0.052 4.3 8.4 0.9 1 23 331 353 331 353 0.97

3 11 0.19 16 6.6 0.2 1 20 357 376 357 380 0.84

4 11 1.5e-05 0.0013 19.5 2.4 1 23 387 410 387 410 0.97

5 11 1.9e-05 0.0016 19.3 0.9 2 23 417 439 416 439 0.95

6 11 8.3e-07 6.9e-05 23.5 0.7 1 23 452 474 452 474 0.96

7 11 2.9e-05 0.0024 18.7 0.2 1 22 480 501 480 505 0.94

8 11 2e-05 0.0016 19.2 1.2 2 23 514 536 513 536 0.96

9 11 4.2e-05 0.0035 18.1 1.1 1 23 542 565 542 565 0.97

10 11 6.5e-07 5.4e-05 23.8 0.4 1 23 574 596 574 596 0.99

11 11 0.0018 0.15 13.0 0.1 1 23 602 625 602 625 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	3.5e-05	0.0029	18.4	1.2	1	23	302	324	302	324	0.98
2	11	0.052	4.3	8.4	0.9	1	23	331	353	331	353	0.97
3	11	0.19	16	6.6	0.2	1	20	357	376	357	380	0.84
4	11	1.5e-05	0.0013	19.5	2.4	1	23	387	410	387	410	0.97
5	11	1.9e-05	0.0016	19.3	0.9	2	23	417	439	416	439	0.95
6	11	8.3e-07	6.9e-05	23.5	0.7	1	23	452	474	452	474	0.96
7	11	2.9e-05	0.0024	18.7	0.2	1	22	480	501	480	505	0.94
8	11	2e-05	0.0016	19.2	1.2	2	23	514	536	513	536	0.96
9	11	4.2e-05	0.0035	18.1	1.1	1	23	542	565	542	565	0.97
10	11	6.5e-07	5.4e-05	23.8	0.4	1	23	574	596	574	596	0.99
11	11	0.0018	0.15	13.0	0.1	1	23	602	625	602	625	0.96

Sequence Information

Coding Sequence: ATGGCTGCAAATACTAAAATCACAGAAAATGTTTGTTTGGGTTGTCTGTGCAGTTCAAATGATTGCAAAATTTTGGATTACACAATTCAGTATGCACATTTCAGAGCAATATTTGAGGTTCGTTCAATAAACCTATGTTATATATGCAGGCGTGTTGCTCAAAATGCAGAAATTTTCATACAAAAAGTTCAGAGCAATCAGATACTATTGGAGAACTGTCTTGGGGATACATGCGCAACAAGAGAAGACATCAAGTCCCAACAAGAACCACCTATAGCACTCAACCAAACACCGTTAGATATTATCAGTATCACTGGAACAGACTACAATGACTGTGAAAAGACTTGCAGTGTCTTCAAAGTGACTCACAGTAATACTAAAGTGACTTGCAGTAACTCTGGTGAGGTTAACGAAGAACCTTTGTTAATATGCAATGATATTTTGTGTAATACAAATTCGGAAGATATGCAAGTCAGTTGTGATAGACAATTAAAAGGAAGAAAGAAGGAAAATTGTTTAGAAGAGCTATTTTCGCATGAGAAGAAAAACATAAAATTAGAATTAAAAGAAGAAGATATAGTGTTGGATCATTTAGAATATGTGGATGATAATGACGATTATCAAGATGCATATGTAAAAGAAGAAGACGAATGCCCACTAAAAGCGTTATTAAAAAAAGAAATACAAATAGAAGGCATAGAAGTAATGAGTCTAAGAACAACATCCAAGAGGAAGAAAGTTAAAAAGAGAGGAAGACCTAAGAGTATAAAGAAGGTGATTAAACAGCCAAAAGTTTTAAATTATGATGACTCAACCGGGATAGAAACATTTTACATAACAGAGGAAGAATGCATGGAAGAGAGAAAAAAACTGGCACTCGATAAAAAGTACACAAACTGTCCATACAGGTGTGACGATTGCCTGAAGGGTTTCAGTTTTAAAGCCAGCTATAAAGTGCACATGGAGAAGCATAGCCCGGCTATGGGCTCCTTTATATGTGATATTTGTAAACTTAGAATGGACACGGAGGAAAAACTGCAAAACCATAAAAGATATCACTCAATACGTTACAAATGCACTGAGTGTGGTATTGTGCGAATCAGTCGCGTCACTATCAAAGATCACTTTGCCGCTTACCATAGACAAGGCGAGCGGGCTTTCGTCTGTCCGTACTGCAGTAAAGCGTTCAAACGCCAAACATCCCAGAGGAAGCACGTGAGATATACGCATTTGAATAAAGAACGAGTGACGTGCGCCTACTGTCACAAAAGTTACGCCAATAAGAGTGTCCTCAAAGCTCATATGATGCTGAGTCATCCGAAAGAGGTGTCGGCTCCGGCGGTGACGAAGCTGTTCCGTTGCGAAGAATGTGGCATGTCTTTCAGGACACCGTCGATGCTGACTAAACACGGGACCAAGCACTCACTCACCAGGGACTTCTACTGTGTCGAATGTGACAAAGCATTCAAGTCAGAAGGTGGCCTGAAACAGCATTTGAAAACTGTACAGCCACATGTCAATTATTCGGAACTGCCGCTATCGTGCCCGCATTGCGATAAGAGATTCGCCATTAGAAGAGATCTCGACCGACATATGAACAGAGTGCACTTGGATATAAGACCTTTTAGATGCGATAAATGCGACAAGGCGTACGTGAATAATTGGTCGTTGATTATCCACAAGCGTCACGTGCACGAGGGCTACCGGCGACCCCTGCGGTACCCCTGCAAGATGTGTGACAAAGTATTCGACCGTAACTCAATTCTCAAGGCGCATATCCGAACCCACACCGGCGAGAGACCATACCAATGCAGCTTGTGTCCCGCGCAGTTCAGTCAGTCCGGCGTTCTCGCCACCCACGTCAAACTGATACATCTCAAACTGACGAGAGACGGCAGACCGAAGGCTGATTCTGTGAAATAA
Protein Sequence: MAANTKITENVCLGCLCSSNDCKILDYTIQYAHFRAIFEVRSINLCYICRRVAQNAEIFIQKVQSNQILLENCLGDTCATREDIKSQQEPPIALNQTPLDIISITGTDYNDCEKTCSVFKVTHSNTKVTCSNSGEVNEEPLLICNDILCNTNSEDMQVSCDRQLKGRKKENCLEELFSHEKKNIKLELKEEDIVLDHLEYVDDNDDYQDAYVKEEDECPLKALLKKEIQIEGIEVMSLRTTSKRKKVKKRGRPKSIKKVIKQPKVLNYDDSTGIETFYITEEECMEERKKLALDKKYTNCPYRCDDCLKGFSFKASYKVHMEKHSPAMGSFICDICKLRMDTEEKLQNHKRYHSIRYKCTECGIVRISRVTIKDHFAAYHRQGERAFVCPYCSKAFKRQTSQRKHVRYTHLNKERVTCAYCHKSYANKSVLKAHMMLSHPKEVSAPAVTKLFRCEECGMSFRTPSMLTKHGTKHSLTRDFYCVECDKAFKSEGGLKQHLKTVQPHVNYSELPLSCPHCDKRFAIRRDLDRHMNRVHLDIRPFRCDKCDKAYVNNWSLIIHKRHVHEGYRRPLRYPCKMCDKVFDRNSILKAHIRTHTGERPYQCSLCPAQFSQSGVLATHVKLIHLKLTRDGRPKADSVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00125335;
90% Identity: -
80% Identity: -