Asyr016163.1
Basic Information
- Insect
- Apeira syringaria
- Gene Symbol
- ZFX
- Assembly
- GCA_934045895.1
- Location
- CAKOGY010000217.1:544897-554755[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.0063 0.52 11.3 0.6 1 20 112 131 112 133 0.94 2 26 0.0005 0.042 14.7 3.2 1 23 165 187 165 187 0.99 3 26 0.002 0.16 12.9 2.4 1 23 192 215 192 215 0.95 4 26 3.2 2.7e+02 2.8 1.7 5 21 221 237 220 238 0.92 5 26 0.016 1.4 10.0 1.6 1 23 247 270 247 270 0.93 6 26 0.00034 0.028 15.3 5.0 1 23 276 298 276 298 0.97 7 26 1.3 1.1e+02 4.0 4.2 1 23 305 328 305 328 0.94 8 26 0.0015 0.13 13.2 0.1 1 21 341 361 341 362 0.95 9 26 0.00039 0.033 15.1 1.0 1 20 462 481 462 483 0.93 10 26 1.9 1.5e+02 3.5 0.7 2 23 515 537 514 537 0.95 11 26 0.00029 0.024 15.5 3.4 1 23 542 564 542 564 0.97 12 26 6.7e-05 0.0056 17.5 0.4 1 23 603 626 603 626 0.95 13 26 7.6e-05 0.0063 17.3 2.1 1 23 632 654 632 654 0.98 14 26 0.76 63 4.7 1.7 5 23 664 682 662 682 0.96 15 26 0.001 0.083 13.8 0.5 1 23 688 711 688 711 0.98 16 26 8.1e-05 0.0067 17.2 0.2 1 23 719 742 719 742 0.94 17 26 4e-05 0.0033 18.2 0.4 2 21 909 928 908 929 0.94 18 26 0.15 13 6.9 0.1 3 23 936 957 934 957 0.95 19 26 0.097 8.1 7.6 0.0 2 23 963 985 962 985 0.95 20 26 1.6e-05 0.0013 19.5 0.7 1 23 990 1012 990 1012 0.98 21 26 6 5e+02 1.9 3.4 2 20 1016 1034 1015 1036 0.92 22 26 3.4e-05 0.0028 18.4 0.7 1 23 1062 1085 1062 1085 0.92 23 26 0.006 0.5 11.4 0.6 1 23 1091 1113 1091 1113 0.95 24 26 0.093 7.7 7.6 0.1 1 23 1119 1141 1119 1141 0.97 25 26 0.016 1.3 10.0 2.2 1 23 1147 1170 1147 1170 0.94 26 26 0.0026 0.22 12.5 0.5 1 23 1176 1199 1176 1199 0.96
Sequence Information
- Coding Sequence
- ATGGAATCAAGCGCCACACTGCCGGACCGAGCATGCCGAAAGTGCTACACATCTGTTACGGACTTTCTGCCCTTCCTCGAACTGTGCAGAGAATCAGCCCATAAGTGGAACGAAGTCACAAAGCAATTGGAGACGATATCTGTTAATAAGAAATCATTGACAACGACAGCTTATGTTCTGCTCGACGGTGATCCGAAAACCATTTACGATAGAAGCCAAAAGAATAAAAGTAAAAGAGAAATCCTGAGATGTATTAGAGTCCGCCTCAACGACGTACGTTACGAACAGAGAGCGAAACTCAAAAGACTTAGAATCAAAAAACCCCTCCATGGCTTCGCGTGTCCGGAATGTGGGAAGCGTTGTCAGAAAATTAAAGAGTTCAACCGACACATAGCCAATGCCAAGAAGCAATGCTGTGAATACTGCCACGCTATTATCGATATCGATTCGTTTGGCAAGCATCTATTCAGAAAACATCAGCAGATGTATCTTTTCAAGTGTCAAATGTGTTCACTAAAATTCAAATCGAAATACCGCTTACTGCTTCACCAAAGAGTTCACAATAAAGGGAGTTTCGTTTGTCCAGAGTGCAAAATGACGTTCAAAACACATCTCCAACTTTCCCTGCACACAAATCTCAAGCACACTGCCAAAATCTGCGTTTGCAACAAATATTTCTCCAATAAGATATGCTATCGGTATCATAAACGGGCATGCGTCGCTAGAGAAGCGCAGAGGTTTATCTGTGACCACTGTTCGAAGGGGTTCCGCAGTAAGACGATTTTGTATACGCACATTGTGAAAATACACAGTCGAGATCGTCACCACCAGTGTGAGTACTGTGGCAAAGGTTTCTACAATTCTCACGCGTTGGTGGAGCATCGCCATTCGCACGAGAAGAAGCCCGACCGGTTCACGTGTAGATTTTGCGGCCAAAACTTCTTTTCTAAGGGTGGCCATCGAACACATTTACGGGACAAACATTACAGGCTCAACCCGGAATTGTACAAGAAGGAGCGATATGAGTGTCATATCTGTAAAAGAATGTTGATAAGCGAGGCGAATCTCGATCGACATATTATGGTCGTGGATGAGCCGGATTTGCCACCGGGTATATGCCGCTATTGCACCGAAGCCGTGGTGTCTGCTGCAGATTTCAAAACGTTATGTGAACAGTCTGCGCACCGGTGGCGAGAGGCGGTCGCGTGTCTGACAGTCTGCCCCGATCTGAAAGAAGATGATAAAACATTATTTATATTCCTAAAAAACGGCCAACATATCTACAAAGGATCGGACGCTATATCCACGCCAGAAGACGCCGTCACCGTCCTGAACACTCCACCCGATTTAAAAAGAAAGAGAAGGAAAACTCAGAGGCGATCTTGCAAATGTCCATATTGTCAAAAACAGTTCAGTGTTTTGGAGAACTTGAACGATCATTTGGAGTATACCATGAAAAGGTTCTGCGGCGTGTGCTGTGTCATGTACGACAAAATGGATTTGGCAAGACATTTGGCGGAGACACATAACGAATTAGTTATTGAATGTCAGGAGTGTTACCAGCTATTCGATGATTGTGTAGAAGCGCAGTTGCATTTGAAACGCCAGCACGAGGCTAAGACTTTCTCTTGCCGAGACTGCAGGAAAAGCTTCTCGTCTGCGCGCGGTCTCAGAGCGCACCACTATCGTCACGCTCTGTTCCACTGTCCTTGCGGCAAGAGTTTCGAAAACATCAAATGCCACAGATACCATCTGAGCCAATGCAACTATGGAAGCTCGACGTGGAAGAATGCAGGCGAACCGTACTATGAGTGTAACGATTGCGGTACTAAGTACGACAAAAAGGCCTCTCTACGCATACACATAATCCAAAAACATTTGTTCGTCTTACCATTCGTATGTGAAACGTGCGGCAAGCGGACTTCAACCCTCCCACATTTGAAATCCCACGAGAAGACGCACTCAACACAGCGTAAGACCTTACAATGTCACTGTGGTGCTAAATTTCGTACAGATTTAGGGTATAAACTGCACATGAAGATTCACACTGGAGATAAATCGTACCAATGCGAGTTGTGTGGCGAAGGGTTCATCTCCTCTTCTCGTCGCTTGGACCATATGAAGCGACGTCATCAGAGTATTGGAGAGATGTCGCACGCCTGCACGGTGTGCGGTGCGAGGTTCATTAGACCCTGGGAACTGAAGAAGCATTACCTGGTCCTGCACAACACTGTTGTCGACGTGGCTCCTCGTAAGAGACGTTTCGTCGATCACTGCGGTCGACATCATCATCTCAGTATCAGAGAAGACGCCGCGGAGGAGAGTTCTAAGCTCTTGTCGCCGCCCGGACCTGAACCACTGAAGATGTCGACCGCAGTGATCGACGAAACGTCTGGAACACAAGTAACCGAAGACAGCGTTTGCCCCAGAGGGGCTTGCGTGACCTGTGCAAGTGCGGCCCTCGCTGCGCAAGAATTCCGTTTGTTCGTCCGAAACTCTGAGAAGCTCTGGCTCAAAGCCATCTCTGAACTGGAAACCCTAGAGTACGTGGACAACTCGCGTGGGGTGAAATCGGTCTGCGCTTTTGTAACCCAAAGTGACCTCACAATACAAACCGGTAGAGACTATATAGGAGGCGAACCGATGGCTATAGTAAACCGGTCGAAAGCCAGATTTAAAAACATTCATCGCAAACCTAAATTCGGCCGAGGTGGACCTTTAAGCACGTGTCCGGATTGCAACAAAACTTTTGCAAATCCATATTTGTTGCACGATCATTTGAAGAACAGTGGACAAAAAGATGCTTGTCAAACCTGTGGAGTTGTGTGCCCCCGAGGTCGGGGATTAAAAGAGCACTTGATAAAAGCGCACAACAAAACTCCAACAATGTGTTCGCAATGCCCAGCCGTATTCTTAAGGGAAGCTGATTTAGAAGATCATTTAAACAAGGCTCATGTACCCGGAGTGTACACATGCACGGAATGCGGAAGGATCTTCCCGAGGAAGTCCACATACGAGTACCACGCCCAAATGCACGTGGTCTTGACTTGCCGGAACTGCAACGTACAATTTACCAGTAGAATTTGCTACAGAGAGCACAGGACTCATTGCGAACCTGATGCGAAACCTGATTCCAAAACTGTACCCAGAAATCGGCGGTCGAACAATCGAGACCCGGCCATGTTTATATGCGATTATTGCAATAAGAACTATAAAACGCGTACGCAATTACAGAATCATATCGTTTGGATTCATATGGACGTGAGACCTCACCAGTGTCAGTGGTGTGGAAAAAGGTATTACACTCTCGCGAGACTGGCTGAACACACAGTGGTGCATACGCGCGCTAGGAAATTCGAATGTGACATTTGTGGCGCGAAACTGGTCTCCAAAATGGCCGCCGTGTACCACAGAAGGCGCCATACTGGCGAAAAACCTTACAAATGCGAAGATTGTGATGCTTGCTTTATATCTTCATCTCGCAGACTTGAACATGCTAAAAGAAAGCATTTAAAAGGAACTAGATTCCAGTGTCCACTGTGTATATCTAGTTTTGCTAGGAAAGGTGAACTCAAAAGGCATAGCAATAAAGTCCATTTTAAAACCGGTACGCCTAAATCTGAGAGTGTGAAACGCAGTAACAGCAGTTTAATGATAGAAAAAGTACAAACTATGACTGAAACTGAAGTAGTTTCTATGTATTCATAA
- Protein Sequence
- MESSATLPDRACRKCYTSVTDFLPFLELCRESAHKWNEVTKQLETISVNKKSLTTTAYVLLDGDPKTIYDRSQKNKSKREILRCIRVRLNDVRYEQRAKLKRLRIKKPLHGFACPECGKRCQKIKEFNRHIANAKKQCCEYCHAIIDIDSFGKHLFRKHQQMYLFKCQMCSLKFKSKYRLLLHQRVHNKGSFVCPECKMTFKTHLQLSLHTNLKHTAKICVCNKYFSNKICYRYHKRACVAREAQRFICDHCSKGFRSKTILYTHIVKIHSRDRHHQCEYCGKGFYNSHALVEHRHSHEKKPDRFTCRFCGQNFFSKGGHRTHLRDKHYRLNPELYKKERYECHICKRMLISEANLDRHIMVVDEPDLPPGICRYCTEAVVSAADFKTLCEQSAHRWREAVACLTVCPDLKEDDKTLFIFLKNGQHIYKGSDAISTPEDAVTVLNTPPDLKRKRRKTQRRSCKCPYCQKQFSVLENLNDHLEYTMKRFCGVCCVMYDKMDLARHLAETHNELVIECQECYQLFDDCVEAQLHLKRQHEAKTFSCRDCRKSFSSARGLRAHHYRHALFHCPCGKSFENIKCHRYHLSQCNYGSSTWKNAGEPYYECNDCGTKYDKKASLRIHIIQKHLFVLPFVCETCGKRTSTLPHLKSHEKTHSTQRKTLQCHCGAKFRTDLGYKLHMKIHTGDKSYQCELCGEGFISSSRRLDHMKRRHQSIGEMSHACTVCGARFIRPWELKKHYLVLHNTVVDVAPRKRRFVDHCGRHHHLSIREDAAEESSKLLSPPGPEPLKMSTAVIDETSGTQVTEDSVCPRGACVTCASAALAAQEFRLFVRNSEKLWLKAISELETLEYVDNSRGVKSVCAFVTQSDLTIQTGRDYIGGEPMAIVNRSKARFKNIHRKPKFGRGGPLSTCPDCNKTFANPYLLHDHLKNSGQKDACQTCGVVCPRGRGLKEHLIKAHNKTPTMCSQCPAVFLREADLEDHLNKAHVPGVYTCTECGRIFPRKSTYEYHAQMHVVLTCRNCNVQFTSRICYREHRTHCEPDAKPDSKTVPRNRRSNNRDPAMFICDYCNKNYKTRTQLQNHIVWIHMDVRPHQCQWCGKRYYTLARLAEHTVVHTRARKFECDICGAKLVSKMAAVYHRRRHTGEKPYKCEDCDACFISSSRRLEHAKRKHLKGTRFQCPLCISSFARKGELKRHSNKVHFKTGTPKSESVKRSNSSLMIEKVQTMTETEVVSMYS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -