Basic Information

Insect: Apamea sordens
Gene Symbol: -
Assembly: GCA_945859755.1
Location: CAMAOQ010000048.1:1075192-1093857[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.023 1.9 9.9 1.4 1 23 1751 1773 1751 1773 0.98

2 9 0.25 21 6.6 0.2 1 23 1780 1802 1780 1802 0.98

3 9 0.00084 0.07 14.4 3.5 3 23 1837 1858 1836 1858 0.95

4 9 0.0003 0.025 15.8 0.3 2 23 1865 1887 1864 1887 0.96

5 9 0.0022 0.18 13.1 0.4 1 23 1900 1922 1900 1922 0.96

6 9 0.0003 0.025 15.8 1.4 1 23 1936 1959 1936 1959 0.97

7 9 8.5e-05 0.0071 17.5 1.5 1 23 1965 1988 1965 1988 0.96

8 9 5.8e-05 0.0048 18.1 0.2 1 23 1997 2019 1997 2019 0.98

9 9 0.011 0.93 10.9 0.4 1 19 2025 2043 2025 2048 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.023	1.9	9.9	1.4	1	23	1751	1773	1751	1773	0.98
2	9	0.25	21	6.6	0.2	1	23	1780	1802	1780	1802	0.98
3	9	0.00084	0.07	14.4	3.5	3	23	1837	1858	1836	1858	0.95
4	9	0.0003	0.025	15.8	0.3	2	23	1865	1887	1864	1887	0.96
5	9	0.0022	0.18	13.1	0.4	1	23	1900	1922	1900	1922	0.96
6	9	0.0003	0.025	15.8	1.4	1	23	1936	1959	1936	1959	0.97
7	9	8.5e-05	0.0071	17.5	1.5	1	23	1965	1988	1965	1988	0.96
8	9	5.8e-05	0.0048	18.1	0.2	1	23	1997	2019	1997	2019	0.98
9	9	0.011	0.93	10.9	0.4	1	19	2025	2043	2025	2048	0.90

Sequence Information

Coding Sequence: ATGTTGGATTTAAAGGATTTGATCAAACAGAGAGGCAACATCAGAGCTCGTTTAACATTATTTGAGAAATATATAGAATCAAGCAAGTTAGATATTAGAGAATTACCTCTAAGACTAAATAAGTTACGAGAACTGTCTTGCACCTTTGATGATATTCAATCGCAAATTGAAATGTTGGATGAAGACTCGGATAAGCAAATTAATGAGCGTGAAATTACAGAAAATATATTCTTCAAGTTAACTGCTAAAGCACAGACCATGCTAGACAACATTGAGAAAGATCATGGCAGATTAGAGTCCTCGTCCAACTCAATATCCAAAATATCACATGGTTTAAAGCTACCACCGATTAAGATTGCTACATTTAATGGTGAATCAACTAAGTGGCTTTCCTTTAGGGATATATACTTATCGCTAATTCATAACAATGAAAACATTGATGATGTAAATAAGTTCCACTATCTCAAATCTTACCTAGAGGGCGCTGCTTCTTCAGTCATAAGCTCTGTATCTATATCTTCAAACAACTATTCAATCGCTTGGGATTTGCTTTGCCAGCGATATGATAACAAGCGTCTTCTAATAAATGAACACATTAAGTGTTTGTTCTCAATTGAATCCCTACATAAGGAATCGGATGTCGGCATACACAATTTAATTGATTCTTTATCTAAAAATCTAAGTGCGTTGAATTTACTAGGGGAACCCACAGACAAGTGGGATACACTTATTATTTACCTGGCCTCCACAAAATTAGACTGCATAACTGCCAGAAAATGGGAGGAGTTTAGGAGTGATCAGGACTCGCCAACTCTAGAACAATTCTATTGTTTTCTTCGTAAACGAGCTACAGTTATGGAAACAGTTAATGTTGGTAGGATTGTAAAAAATGAAAAACGTCACAGTTTGcccaaaacaaaatcatttatttcatctaCTGTTGATTCTTCTTCCAGTAAAATACAGTGTGTTCTCTGTAAACAAGATCATAAGTTGTATGAGTGTACTAAACTTAAATCTCTTCCTGTTGAGGAACGAATCTCACAAATTGCATTGCTAAAGGTATGCAGCAACTGTTTGCAGGGAGGTCATAAAGCATTCCAGTGTAGGATGAGTGGCTGTAGAATATGCCGGAGAAGGCACAACACTCTCCTACACAAACAACCTCTTAACTCTCAACCACAGAATACACAACAGAATGAACAGCCATCATCTAATATTACACCTACTGGTGATAATAACTTCAAGAAGGTTGAAAGTAACTCACCTCAAATTGTGTCCGCTGCAGCATCTGGTCCCTCCACGTCCGTTTCCATGTCTGCTGTCTCCACCAATCAAACCCTACTGTCCACTGCATTGGTCAAGGTGGCATCcgacggcaagtcatttattttgAGGGCTTTACTGGACTGTGGCAGTCAAACATCTTTCATCAGTGAGAAAGCTCAGAAAATGATTGGTACCTGTaggaaaaaaaactattatcatTGTGTTTCTGGTTTAGGCAATACAGTATTGAATGTTACAGAGCATTGCAACATAGAAATACATTCTATGCACAAATCATTCAGCATGCCTGTCACATGTTTTGTTTTACCCCAAATTACTGATAGCCTGCCCCATACTGCAGTTTGTGTGCAAGAATTAAACATTCCTAGTAACATCCAACTTGCTGACCCTAAGTTTTATTTACCAGCCGAAATAGATTTGTTGCTAGGCGCTGACATATTTTGGGAGCTGATTCAGACGGCTAGAGTTAGTTTAGGTTCACAAAGGCCAATACTACAAAAATCTCACCTAGGTTGGATAGTGGCTGGTCCCACGGGGGGAAGCCACTACACTAGTAATagtcaaaaattacattgtCATTTTTCACAAGAAATTAAAGATCAATTAGCTAAGTTCTGGGAACTCGAAGAGATTCCTTCAAACATTGACTACGATAGTAACGATTGCGAGAAGTTGTTTAACGACACTACATTTCACATGAGTGACGGCAGATTTTGTGTTAAAATTCCGCTTAAAAATTCTATGGACATGTTAGGTGATTCGTACAACATGGCTGAAAAAAGATTGTTTCAACtagagaagaaatttaaaaacaaacctaCTTTAAAACAACAATATGGTGATTTTATTCGCGAGTATGAAGGTTTAGGTCATATGACTCAATTAAGCAGGAAACCTGTATTTGGTTGTTATCTCCCACATCATGCAGTAATACGAGAATTCAGTGAGACTACCAAACTACGTGTTGTTTTTGACGCCTCGGCAAAAACATCTACTGGAGTATCGTTCAACGACATACAACATGTCGGACCAGTAGTGCAGGATGACCTCTTTTCAATTCTGTTGAGGTACAGACAATATCGTTATGTGGTCTCGGCAGACGTGGAAAAAATGTACCGCCAAATATTGGTGGATCCAAGTCAGCGAATGTTGCAACAGATTTTGTGGCGCGAAGATCCGTCAGAACCGATTaagatttttcaattaaataccGTGACATACGGAACAGCTTCGGCTCCATTTTTAAGCACGAGGTGTTTGGTACAGCTGGCCAAGGAATGCAAGGACGATAAAATATCGAACATCATACAAAGGGACTTCTATGTCGACGATTTCCTTTCTGGAGCTGAAACTGAAAGGGAATTAAAGAGTATTATAGAGTCAGTAACTGCAATTCTCAATTCAGCTTGTCTTCCTCTACGCAAATGGCGCACCAACTCACCATCCGCAATTCATAACGATTCAAACCCTTCAGCCATAAAAAACTTAGATTTGAGCTCTCAAACTTCAAGCGTGTTAGGGTTGAAGTGGGATCCGGCCCAAGATGTTTTCCGTTTTTCAGTGAACATACAACGGGAACAAGTCGCAACTAAACGCTCCATTTTGTCCAACTCGGCTAAGTTATTCGACCCATTGGGTGTACTAGGTTTATGTACTattgttccaaaaataatacTACAAAAGCTATGGCTATCTAATTTAGATTGGGATGAGCCTGTAGATAATGCAACACAAAAGGAATGGATAAGTTTTTTAAGCAATTTAGAAACTCTTTCTAAAATTGAAATTCCCAGATGTGTTCTCATCAGCGAACCAATTATAATTGAGCTTCACTCATTCTCAGATGCCTCCCAAGTTGCCTACGCCTCTGCAATTTATCTCCGCTCGGTTGACAGTTCCGGGCGTACTCTCGTTAGATTACTTTGCGCTAAAACTAAGGTTGCACCAGTAAAGTCTGCAACCATACCTAGGCTCGAGCTGTGTGGTGCATTGCTTTCCGCACGCCTGAGTAACAAGGTTTTAAAGGCGCTGCGTTGTAAAATTGACTCAGTTTCTCACTGGACGGATTCAACAGTGGTCCTGGGTTGGTTGTCCGCTCAGGCCTGTAATTTAAAACCCTTCGTGTCGAACCGTGTTGGTGAAATTCAAGAATTGACTAAGTCAGGCACTTGGAGACATGTTCCTGGCGATAAAAATCCTGCAGATCTAGCGTCTAGAGGATTAAATCCCAAGTCAATTCATTTAGCTAAACTTTGGTGGGAAGGTCCATTGTTTTTATCTGAGGACTCAAGTAAGTGGCCTCAGACTAGTAATAGCAAAGGTATATCCGAATTGCCTgaaatcaaaattaacaaaaagatAACTACAATCACGCTGCAGTCGACAGCAGCTCGTCCTACGCTGATAGATTTTGAAAGAATTTCCAGTTTCGCTACTATGCAAAGATCTATAGCCTATGTTCTGCGTTACATAAACTACAAGCGTTATAAACAGGCCAAGGTAAGTGGTGTTGATTTTGCCGGGCCGTTCTACATCACCGATCGCAAAGGTCGTGGGTGTAGAATCACAAAATGTTACATGTGTCTATTCGTTTGCTTCAGCACAAAGGCTGTGCACTTAGAAGTAGCAAGTGACCTCACTTCCGATGTTTTCATTTTGTGCTTGAGGCGTTTTATATCCCGTAGAGGAAAGCCCTTAGAACTGTACTGCGATAACGGGACAAATTTTGTCGGTGCAAACAACGAATTAGAAAGGTTTTTAAAGTCAAGCAATGAATGCGTTACCGGTTTCGCTGCCGACGAAGGCATTACGTTCAAATTTTCGCCAGCTTACTCTCCCCACTTTGGTGGGCTTTGGGAGGCAGGCGTTAAATCCGCTAAATACCATACGACTAGGATTCTAGGTGATAAACACCTTACGTTTGAAGAGTTATCAACGTTGTTTGCGCAAATTGAAGCAATCCTGAATTCACGTCCGTTAAGCCCTCTATCATCCGATCCTAATGACCTGAATCCTTTGACACCCGCGCACTTCCTGATCGGCAGGCCATTAACTTCATTCCCATCGGAAGCCTTAACCAATGCAAACACCAACAGACTTGACAGATACCAAAGTCTAGATCAAATGCGACAACATTTCTGGGAAAGGTGGAGAAACGAGTACCTAAGCGAATTACAGCAAAAACACAAATGGCGGATCTCTCAAAGAGGACTCCAGGAAGGCGACTTGGTCATTATCAAGGAACCAAACGTCCCGCCATTGAAATGGCGTATGGCGCGGATTTGTAAGCTGTATCGCGGGACTGATGGAGAAGTACGAGTGGCGGACGTCTACACGTCAAGGGGCACTTTCCGGCGAGCTGTCCATAATCTTTGCTCTCTATCCGAGCCGACTTCAGCCGCAGAGCCTCGAAACCCTGAAGCGTTCGAGGGGGGGGAAGATGTTGAAGCCGTAATGGATGATACGTTAAAATCAGTATGCACACAGACACAACCCCTAGTCAATTTAACACAAGTGCCATTTGATGTGATAGAGTTGTCAGAGAGAGACGGCCATAGTTCTGAGGAGACCTTCTCTGTCGTATGCTCGAGGAGCCGGAGTAAGGATGTCCAGGTCAAGACTGAGATGAAAGAGGAGGAGTATCTGGATCATCTGGAAGGAGAGTTTATTGGTGGTGATGaGTTCCCCGAGTCATATGTAAAAGACGAAGATGACGCATTTCCCCTGAAAGCTTTACTGAAAGAAGAATTACAACTAGAAGACATTGATAGCTTGGACCTCATGGGTCTTAGTGCGACACTCAAAAAGAACAGACACAAAAAGAAGAGTAAAATCAAACGGGAAAACTTGGCAGAGCTAAAGAGAGACATACCTAAAATAAAGACGATATACATAACTAGAGAACAATGTATGGAGGAACGTGTGCGGATGGAGCAGGACCAGAAATATATGAACTTTGCTTACAAATGCGGGAACTGCATCAAAGGGTTCAGCTTCAAAGGCAGCTATGATAAGCATATGGAGAAACATAATCAGTGCATGGGGGACTATGAATGTGATATTTGTAAACAGAGAATGGAGTCGGAAGACAGACTCGTTGGGCACATGAGATATCATTTAATCCGCTACAAATGTGCAGAATGTGGTTTAATAAGAAACTGTCGCGTGACGATTCAAGATCACTACAATGCATATCACAATCACGGTTTTCAGACCCTGTGTCCTTTTTGCAGCAAGAATTTCAAACGTCGGACGTCACTGCGCAAGCACATACACTACGCACACTCGCACAAAGGCCGCGTACAGTGCGCGTACTGCCACAAGACGTACGCCGACAAAGGCGTACTGCGCGCTCACATGATCATTAAACATTCCAAAGAAGTATCAGCTGTTCCGATAAGCAAGAAGCATGTGTGCCAAGAGTGTGGCATGGCCTTCCAGGCACCTTCTCAGCTGAGGAACCACAGCATCAAGCATTCCGAGAGCCGGGACTACTACTGTGTGGAGTGTGATAAATATCCCTGCCTTCACTGTGACAAACGTTTCGCGATACGGCGAGATCTAGAGCGCCACACCAACAGGGTACACCTAAATATCAAACCGCACACTTGTGATAGATGTGATaagAGTTACGTGAACAACTGGTCTTTGAAGGAACATCAGCGGTTGGTTCACGAAGGCTATAAAAGACCACTACAGTTTCCATGCCCCATGTGCGACAAGGTATTCGATCGCAAACAGATACTAAAAGGCCACATCCGCACCCATACTGGCGAACGTCCATATCAGTGCAGCAAATGTCCAGCTTCTTTCAGCCAGTCCAGCATACTTCGCACCCACGACAGACTCATACACCTCAAACTGACCAGGGATGGACGGCCTAAGGTCAAATAG
Protein Sequence: MLDLKDLIKQRGNIRARLTLFEKYIESSKLDIRELPLRLNKLRELSCTFDDIQSQIEMLDEDSDKQINEREITENIFFKLTAKAQTMLDNIEKDHGRLESSSNSISKISHGLKLPPIKIATFNGESTKWLSFRDIYLSLIHNNENIDDVNKFHYLKSYLEGAASSVISSVSISSNNYSIAWDLLCQRYDNKRLLINEHIKCLFSIESLHKESDVGIHNLIDSLSKNLSALNLLGEPTDKWDTLIIYLASTKLDCITARKWEEFRSDQDSPTLEQFYCFLRKRATVMETVNVGRIVKNEKRHSLPKTKSFISSTVDSSSSKIQCVLCKQDHKLYECTKLKSLPVEERISQIALLKVCSNCLQGGHKAFQCRMSGCRICRRRHNTLLHKQPLNSQPQNTQQNEQPSSNITPTGDNNFKKVESNSPQIVSAAASGPSTSVSMSAVSTNQTLLSTALVKVASDGKSFILRALLDCGSQTSFISEKAQKMIGTCRKKNYYHCVSGLGNTVLNVTEHCNIEIHSMHKSFSMPVTCFVLPQITDSLPHTAVCVQELNIPSNIQLADPKFYLPAEIDLLLGADIFWELIQTARVSLGSQRPILQKSHLGWIVAGPTGGSHYTSNSQKLHCHFSQEIKDQLAKFWELEEIPSNIDYDSNDCEKLFNDTTFHMSDGRFCVKIPLKNSMDMLGDSYNMAEKRLFQLEKKFKNKPTLKQQYGDFIREYEGLGHMTQLSRKPVFGCYLPHHAVIREFSETTKLRVVFDASAKTSTGVSFNDIQHVGPVVQDDLFSILLRYRQYRYVVSADVEKMYRQILVDPSQRMLQQILWREDPSEPIKIFQLNTVTYGTASAPFLSTRCLVQLAKECKDDKISNIIQRDFYVDDFLSGAETERELKSIIESVTAILNSACLPLRKWRTNSPSAIHNDSNPSAIKNLDLSSQTSSVLGLKWDPAQDVFRFSVNIQREQVATKRSILSNSAKLFDPLGVLGLCTIVPKIILQKLWLSNLDWDEPVDNATQKEWISFLSNLETLSKIEIPRCVLISEPIIIELHSFSDASQVAYASAIYLRSVDSSGRTLVRLLCAKTKVAPVKSATIPRLELCGALLSARLSNKVLKALRCKIDSVSHWTDSTVVLGWLSAQACNLKPFVSNRVGEIQELTKSGTWRHVPGDKNPADLASRGLNPKSIHLAKLWWEGPLFLSEDSSKWPQTSNSKGISELPEIKINKKITTITLQSTAARPTLIDFERISSFATMQRSIAYVLRYINYKRYKQAKVSGVDFAGPFYITDRKGRGCRITKCYMCLFVCFSTKAVHLEVASDLTSDVFILCLRRFISRRGKPLELYCDNGTNFVGANNELERFLKSSNECVTGFAADEGITFKFSPAYSPHFGGLWEAGVKSAKYHTTRILGDKHLTFEELSTLFAQIEAILNSRPLSPLSSDPNDLNPLTPAHFLIGRPLTSFPSEALTNANTNRLDRYQSLDQMRQHFWERWRNEYLSELQQKHKWRISQRGLQEGDLVIIKEPNVPPLKWRMARICKLYRGTDGEVRVADVYTSRGTFRRAVHNLCSLSEPTSAAEPRNPEAFEGGEDVEAVMDDTLKSVCTQTQPLVNLTQVPFDVIELSERDGHSSEETFSVVCSRSRSKDVQVKTEMKEEEYLDHLEGEFIGGDEFPESYVKDEDDAFPLKALLKEELQLEDIDSLDLMGLSATLKKNRHKKKSKIKRENLAELKRDIPKIKTIYITREQCMEERVRMEQDQKYMNFAYKCGNCIKGFSFKGSYDKHMEKHNQCMGDYECDICKQRMESEDRLVGHMRYHLIRYKCAECGLIRNCRVTIQDHYNAYHNHGFQTLCPFCSKNFKRRTSLRKHIHYAHSHKGRVQCAYCHKTYADKGVLRAHMIIKHSKEVSAVPISKKHVCQECGMAFQAPSQLRNHSIKHSESRDYYCVECDKYPCLHCDKRFAIRRDLERHTNRVHLNIKPHTCDRCDKSYVNNWSLKEHQRLVHEGYKRPLQFPCPMCDKVFDRKQILKGHIRTHTGERPYQCSKCPASFSQSSILRTHDRLIHLKLTRDGRPKVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -