Basic Information

Insect: Apamea sordens
Gene Symbol: ZNF296
Assembly: GCA_945859755.1
Location: CAMAOQ010000095.1:5071329-5089261[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.47 40 5.8 0.2 3 23 123 143 121 143 0.96

2 15 0.0022 0.18 13.1 2.8 1 23 291 313 291 313 0.99

3 15 3.4e-05 0.0029 18.8 0.4 1 23 319 342 319 342 0.97

4 15 0.0044 0.36 12.2 1.6 1 23 347 370 347 370 0.94

5 15 9.2e-05 0.0077 17.4 0.9 3 23 532 552 531 552 0.98

6 15 0.00023 0.019 16.2 3.2 1 23 558 580 558 580 0.98

7 15 0.63 53 5.4 5.0 1 23 646 668 639 668 0.97

8 15 6.8 5.6e+02 2.1 0.1 2 23 676 697 675 697 0.87

9 15 0.0015 0.12 13.6 2.3 1 23 703 725 703 725 0.96

10 15 0.0039 0.33 12.3 3.0 1 23 731 753 731 753 0.98

11 15 0.32 27 6.3 7.2 1 23 762 784 762 784 0.98

12 15 5.3e-05 0.0045 18.2 0.5 2 23 852 873 852 873 0.97

13 15 0.0081 0.67 11.3 3.8 1 23 890 912 890 912 0.96

14 15 1.9e-06 0.00016 22.7 0.7 1 23 918 940 918 940 0.98

15 15 6.6e-07 5.5e-05 24.2 3.1 1 23 946 969 946 969 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.47	40	5.8	0.2	3	23	123	143	121	143	0.96
2	15	0.0022	0.18	13.1	2.8	1	23	291	313	291	313	0.99
3	15	3.4e-05	0.0029	18.8	0.4	1	23	319	342	319	342	0.97
4	15	0.0044	0.36	12.2	1.6	1	23	347	370	347	370	0.94
5	15	9.2e-05	0.0077	17.4	0.9	3	23	532	552	531	552	0.98
6	15	0.00023	0.019	16.2	3.2	1	23	558	580	558	580	0.98
7	15	0.63	53	5.4	5.0	1	23	646	668	639	668	0.97
8	15	6.8	5.6e+02	2.1	0.1	2	23	676	697	675	697	0.87
9	15	0.0015	0.12	13.6	2.3	1	23	703	725	703	725	0.96
10	15	0.0039	0.33	12.3	3.0	1	23	731	753	731	753	0.98
11	15	0.32	27	6.3	7.2	1	23	762	784	762	784	0.98
12	15	5.3e-05	0.0045	18.2	0.5	2	23	852	873	852	873	0.97
13	15	0.0081	0.67	11.3	3.8	1	23	890	912	890	912	0.96
14	15	1.9e-06	0.00016	22.7	0.7	1	23	918	940	918	940	0.98
15	15	6.6e-07	5.5e-05	24.2	3.1	1	23	946	969	946	969	0.98

Sequence Information

Coding Sequence: ATGAACCACACCGCTGCCGCAATCCCAGGAAACATGGACATTGATCCGCTGAGTTCTTACGAGTACCCAGCATACGACAGCTATGCTGCCCAGTCCTACCCATACCCCAGCAAGCTCCAGCAGTCCATATACCAGGCGTACCAACAAACTAACACCAGCTACAATAACACACAAATGGCACAACCGCAAGAACCATTCACAAATCCACCACCAACATCACAAACTTCAATAGACATTGAAATACCACCTAAGAATGAAGAAAAAGACCCAAAACCAGTTTTGAAAAAGAGAAGGAAGGAGAAGAATGGCCAGAAGAGTACTTATTGTTCTGAGAAGATAACGGATGCTACATTCAAGTTCTATGGTTGTTCCGTGTGTAACATCAGTTACAATGCGCTGCACGACCTGGACCAGCACGTGACAGTCCACAAGAACAGAATGACAAGCTATAGACTGCGGTTaagaaatcaatttaaaaagaaacaaattaaaaaagaaaagaaacggttaaataaaaagattgttaaaattaagaaagaaaCTGAGTTTGACATTGAAATTAAACCAGAGGACGGTTACATTGGTGAAGAGAAAGCTGCAGATGTTATAAATAACAGAATTAATCCTGATTCTGAATGTAATGGGAACGTAGATAGTGAAAACAGTGCAATAGAAGCTCAAGATAGCCAAATTAATAGCAATAATGTCACAAATTCTATTAATAACGACCCGCagaacaaagaaacaaactcttTGAGTAACGGGAAAGGGAATAATGAAAATAGTGAATTGGAAAACGGAAATAGTGTGAACAGTAAAGATAAAGAGAACAGTATGGACGAAGCAGAGCTAAATAATTTAGAGAAAATTTACAAATGTTTTGCGTGTCAGAAGCAGTTCACTTTGAGCTATTATTTGAAACTACACGTGCGGTCACACACAGACGAGAAGCCCTACACGTGCAGCGTGTGCGGCCAGTCGTTCATCACGGCCAGCAAGCTGGGCCGCCACAACAAGCGCATCCACCTCGCCGAGCGCTACCAGTGCCGCATATGCTTCAAGATATACTCCCGGTTCGAGCTGCTGACCGCTCACTTCGACAAAACGCATCCTGAAGACAAGCTGGAGGGAGAGCCGTATGACTACAACGCGATCCTGCCGTACCTGAAGGAGCTAGAGGAACAGCTCCTCGCGCCCGAGCTGGCTGAGCTCGACAACAAGCCTAAATCTGAGGACTTGTTCTGGGAGCAGCACGTGGGCCCGCACCAGCAGGGCACCAAGGCGCCCGCGGATATCAAGGAAGAGgCCGAAGACGAGGACCAAAAGGACCTGGTGCCGAAACTAGACATACTAATAGAGGAGGTGAAGGTGGACTATGACGTCACGGTCAAGCGGGAGCTGTCCGACGACGAGCCGCCGGCAGACGCGCCGGACGACGCGGACGACGGGCCGGGCGGGGCGGGGGACGGGGCCGACGTCAAGGATGAAGATAGCCAGTCGGACGAGGACTACTTTCCGTCCAACACGTGGGCCGCCCCGCACGCCGCGTCGCCGCGCGCGCCGTCGccgggcgggcggcgcggcgcgcgcgcgtgcggCGTGTGCCACAAGAGCATTAGCACGGCGTCCTACATGCGCGTGCACATGCGCACGCACACGGGCGAGCGGCCCTTCAAGTGCTACACGTGCGGCCGCGGGTTCATCACCAGCAGCAAGATGCACCGCCACGTTCTCACGCATGCGCAAGACAAAGACGATCTCAAGGCGGAAAGAGAAGACACCAAACCGGAAGTGGACGACCACGCCGCGGACGAGGACCAACGGCGAGGAGATGCCGCTAAAAAACCAGCgaagaaaaaatctaaaatgaaatCGAAGTCGTCAAAGCTGAAGAGTGTCGAGGAGAAGCCGCGCCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAACCAGAAGTTCCTGCACCTGAACATGCTGGAGGTGCACAGACAGtcgcacgcgggcgaagccctAGTGCTGCGCTGCCACTACTGCCTGCAGGAGGCGCCCAGCGACGCGGCACTGCGCGCGCACGAGGCGGAGCACCAGGGGGCCAAGCCCTACCTGTGCACCGTGTGCGGGAAGACCTACAAGAAGAGGGAGACTATGGTGTACCACCGCAAGCGCCACGCGCCGGACAAGGAGTTCGTGTGCGACGTGTGCTCCAAGCGCTTCCCGGCCGCCTGCAAGCTGCACAAGCACCTGCTCACGCACCGCCGCGACGCCTTCGTGCTGCGCTACGAGTGTCCCGTGTGCGCGCACATGTTCCACACGCGCTACCACGTGCACATGCACCTCAGCACGCACCAGAAGGAGGGCCTGATCCTAGAAGAGAATCGCAGCGAGATCCTGGCGATGGTCCTCCAGAATGCGCGGAAGATCCCGCGCGCGGGCGCTGCGCCGGCCCCGGGcgcggccgccgcgccgcccgcatgCCCGCCCGCCGGCGCGGCGCCCACCAGCTCGTCGCCGCCCGCGCACGCGCTGCCGCCCGACGAGCGCTCGCGCGTGTGCAACATCTGCGGCGCCGTGTTCTCGCACTTCTACTACCTGGAGGAGCACCTCAAGAGCCACGGCGAGCGCATCGCCATCGCCGACCTCGACAAGCCGGAGGACAAGAAGTACATCTGTCAGATCTGTAACAAAGGCTTCAAGCTGCACTACTACCTCAAACTCCACAGTTTCACGCACTCGAAGGAGAAGCCCTTCATCTGCCAACAGTGCGGGAAAGGGTTCATCACGAAAGGTAAACTAAAAAGACATCTGGAGACTCACACGGGGCTGAAGAAGTACCAGTGTCACATCTGCTACAAGTTCTTCACGCGGCCCAGCTACCTGCGCATACACGTGCGCACCATACACGGCACGCAGGACTATAACTTTAGGTTCGACAAGGGGTACGGCCTGGGCTCGCTCGCGCCGCCCGTGGCGATGTCGGATGGCAGTCAGAATAGTATTTAA
Protein Sequence: MNHTAAAIPGNMDIDPLSSYEYPAYDSYAAQSYPYPSKLQQSIYQAYQQTNTSYNNTQMAQPQEPFTNPPPTSQTSIDIEIPPKNEEKDPKPVLKKRRKEKNGQKSTYCSEKITDATFKFYGCSVCNISYNALHDLDQHVTVHKNRMTSYRLRLRNQFKKKQIKKEKKRLNKKIVKIKKETEFDIEIKPEDGYIGEEKAADVINNRINPDSECNGNVDSENSAIEAQDSQINSNNVTNSINNDPQNKETNSLSNGKGNNENSELENGNSVNSKDKENSMDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLLAPELAELDNKPKSEDLFWEQHVGPHQQGTKAPADIKEEAEDEDQKDLVPKLDILIEEVKVDYDVTVKRELSDDEPPADAPDDADDGPGGAGDGADVKDEDSQSDEDYFPSNTWAAPHAASPRAPSPGGRRGARACGVCHKSISTASYMRVHMRTHTGERPFKCYTCGRGFITSSKMHRHVLTHAQDKDDLKAEREDTKPEVDDHAADEDQRRGDAAKKPAKKKSKMKSKSSKLKSVEEKPRRKHQKRPHACEYCNQKFLHLNMLEVHRQSHAGEALVLRCHYCLQEAPSDAALRAHEAEHQGAKPYLCTVCGKTYKKRETMVYHRKRHAPDKEFVCDVCSKRFPAACKLHKHLLTHRRDAFVLRYECPVCAHMFHTRYHVHMHLSTHQKEGLILEENRSEILAMVLQNARKIPRAGAAPAPGAAAAPPACPPAGAAPTSSSPPAHALPPDERSRVCNICGAVFSHFYYLEEHLKSHGERIAIADLDKPEDKKYICQICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKGYGLGSLAPPVAMSDGSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121693;
90% Identity: iTF_00121693;
80% Identity: -