Asor012735.1
Basic Information
- Insect
- Apamea sordens
- Gene Symbol
- -
- Assembly
- GCA_945859755.1
- Location
- CAMAOQ010000031.1:3518668-3521004[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.011 13 6.7 2.6 18 43 9 31 5 32 0.93 2 20 0.0026 3.1 8.7 0.5 17 44 36 60 32 60 0.85 3 20 0.0011 1.2 10.0 0.1 18 43 68 90 65 91 0.87 4 20 0.00019 0.23 12.3 1.1 18 44 99 122 95 122 0.91 5 20 0.0019 2.3 9.1 1.2 18 44 129 152 127 152 0.94 6 20 8.2e-06 0.0097 16.7 0.9 15 43 157 182 153 183 0.89 7 20 0.0082 9.7 7.1 0.5 18 44 189 212 185 212 0.89 8 20 0.0031 3.6 8.5 0.8 17 44 219 243 213 243 0.86 9 20 0.22 2.6e+02 2.5 0.1 18 44 254 277 247 277 0.81 10 20 1.1 1.3e+03 0.3 0.9 17 43 301 324 283 325 0.76 11 20 8.2 9.7e+03 -2.5 0.1 18 28 332 342 330 347 0.78 12 20 0.19 2.2e+02 2.7 0.0 15 27 358 370 354 384 0.80 13 20 0.07 83 4.1 4.3 17 43 405 428 397 429 0.89 14 20 2.7 3.2e+03 -0.9 9.3 6 29 423 446 420 458 0.70 15 20 0.0036 4.2 8.3 3.1 13 43 459 486 451 487 0.78 16 20 0.16 1.9e+02 3.0 0.6 18 44 493 516 488 516 0.75 17 20 0.53 6.3e+02 1.3 0.8 18 28 523 533 519 546 0.82 18 20 6 7.1e+03 -2.0 0.3 21 43 556 575 552 578 0.64 19 20 3.1e-05 0.037 14.9 2.0 5 43 604 641 603 642 0.85 20 20 0.95 1.1e+03 0.5 0.3 16 40 660 686 650 702 0.78
Sequence Information
- Coding Sequence
- ATGTATCAGAATCAATTAGATTTCGTTTGCGACTACTGCTCAAGGActtttacaagaaaatataatttacaaactCATATAGAAAACTGCCATATCAACTCGTCATGTCACTGTAATATCTGTGGCCAAAATTTCGGTAGTCCGGCAGGGTTGATCCAACACCTATCTAGAGGTCATAACAACTATGGTCAGCCCTTCCCGGAATGTGAACTGTGCGGACGAATTTTTACAAGAAAACAGAACATCACATCACATATGATTACTGTTCATCTACAAGGATTAGGGTACGAATTTCGGTGTAGATTGTGCGAGAAAACCTTCACAACAGAACGGAATTTGAAGAGGCATATCAATCAGTTGCATAACCCTGATGTCGAGTACCCAACGTGTAACGATTGTCATAAAGTCTTTAGGGGGAAGCACTCGCTCATTGCCCATATACAGTCGGTTCACAATGTGAGCGAAAAAGACGCTATCAAATGCCATCTGTGCGAAAAGGTGTACACGAATAGCAGGAACTTGAAACGTCATATAGAAATGTTTCATGGCGTAAAAGGGGAGTTTAAATGCGACATCTGCCCGAAAGTGTACACTTCGAATCAGAGTTTGAGACGACACGCAAAGACACGACACAACACAGAGAGCCAGGAGCACCTAACATGCAACTTCTGCATGAAAGTCATCATTGGGCGAGAGAATTTCGAAAGCCACATACAATTCCACCACCAAGACACGGAAATGGATGCTAGATATGAGTTTGTATGCGAGTCTTGCGACAAAAGTTTCGAAGAAGAATTTTGTTTACGGCAACACATGAAATTAGAACACTCATTTAAAACCTTCTATAAGTACTGCAAGAAGTCGTTGCTCAAACGCTACGGCATGGACACGCAGCACATATACAACTGTGAATATTGCGACAATTCTTTCCTTACCGTCTATGAGTTAAAAGATCATATGCGCGTCAACCACGATACTGAGTACTCGCTCTCAACTTGCAACGTCTGCTTCAACAAGTTTTTTAGTAAAGAGACTAGAGCCGCACATAGAAATGTGTGTTTACCACCGCCAAACGTAAACACTTGCAGTCATTGCGACAAGCTTTTCACTGATATTTCAAGCTTAGAGTTTCATACGCGAATTTTTCATCCCCAAGCTCAAATCGCTGACTCTAACATATCATCGACAAACATAGATGAGGAAGCTGTCTCTTTCAAATGCGAGCATTGTGACCGTATCTATTACAGTGATAGATCTCTCAAACATCATATGAAGTTAAAACACACGACTGATGAAGAAGTGGAATGCGAACTGTGCGGAAAAATTTGCAGTAATAAATACTATTTGGCTTCGCATATAAAAATCGTCCATAATAACGACTCCTGGTCTAGATGTGAATACTGTGATAAACAGTTTAAATCGAAAAGAAATATCAGAAGGCATATTGAATATACTCATTTGGGAATGCAACGATACAAGTGTGTCGAATGCGAGACTCTGTTCAAAGAGAAAAGGAGTTTGAGAAAACATGTTCGGACGAAGCATCCTAACTCTGCGGCTTTCCCTCAATGCCATATATGTCACAAACGATTCGAGTCGGCGAAGTCTTGTAAAATACACCTTAAACTGTTGCATTCGTTCAACATGAACACTTACCCATGTCACCTGTGTTCCGTATCCTTCAGCTCCAACGAAGCTTTAAATATACATCTAGAAACCAAACACTTAGCCGAAGATCAAATCTACAAATGCGAAGAATGCAACTTAGTTTTCAAAGGGCAGGAAAAGTTCGACGCCCACAACGAAGTCTGCCACGTCAATTTAGTTCCTACGATCAAGCAGAAAGTTCTCCCAAGATGCATTATTTGCATGAAAGATTTCAGCACAAGGAAAACTTTGAAGCGACATATAAAGAAATTTCACGAGGAATTTGATGTGGACGAATTGGCTACTTTTGGCTCGAGGCGTAGAACTTTTACAGTTGACTGCGAAGAGTGTATAAAGAATTTTAACGATGATTTTTACTTGAACGTCTATAACAAGCTGAAACATTTGAGAGACACGGAGGTGTTGAAGTGTGGGACCTGCTTCGAGTCCTACAACTCTTTAGAGTTCGCGATTCAGAGGTACAAGATTACGAATACGGATGCTAGTAAAAGCAAAATGATTTTGAGCGAACTTTGTACCGCGGAGATGAGCGAGGACGAGCCTGACTTCTCGAACTTCGGAGCTCTGCATGATATGTTACCAGAGAGTACCACCGGCGATTTGCAATTAAAATTTGAAACTTTTGAAGATTCGGAGACTGAAATCAAGGCGGAACCGCCGTCGCCGTAG
- Protein Sequence
- MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCNICGQNFGSPAGLIQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEFRCRLCEKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFRGKHSLIAHIQSVHNVSEKDAIKCHLCEKVYTNSRNLKRHIEMFHGVKGEFKCDICPKVYTSNQSLRRHAKTRHNTESQEHLTCNFCMKVIIGRENFESHIQFHHQDTEMDARYEFVCESCDKSFEEEFCLRQHMKLEHSFKTFYKYCKKSLLKRYGMDTQHIYNCEYCDNSFLTVYELKDHMRVNHDTEYSLSTCNVCFNKFFSKETRAAHRNVCLPPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIDEEAVSFKCEHCDRIYYSDRSLKHHMKLKHTTDEEVECELCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCVECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALNIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNEVCHVNLVPTIKQKVLPRCIICMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRTFTVDCEECIKNFNDDFYLNVYNKLKHLRDTEVLKCGTCFESYNSLEFAIQRYKITNTDASKSKMILSELCTAEMSEDEPDFSNFGALHDMLPESTTGDLQLKFETFEDSETEIKAEPPSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00447464;
- 90% Identity
- iTF_00072251;
- 80% Identity
- iTF_00124488;