Basic Information

Transcription Factor Domain

TF Family: GTF2I
Domain: GTF2I domain
PFAM: PF02946
TF Group: Other Alpha-Helix Group
Description: This region of sequence similarity is found up to six times in a variety of proteins including GTF2I. It has been suggested that this may be a DNA binding domain [2, 1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00089 28 5.9 0.0 24 48 2 26 1 27 0.91

2 5 0.00033 10 7.3 0.0 22 48 25 51 22 52 0.90

3 5 0.00033 10 7.3 0.0 22 48 50 76 47 77 0.90

4 5 0.00033 11 7.3 0.0 22 49 75 102 73 103 0.91

5 5 0.00038 12 7.1 0.0 22 49 100 127 97 129 0.90

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00089	28	5.9	24	48	2	26	1	27	0.91
2	5	0.00033	10	7.3	22	48	25	51	22	52	0.90
3	5	0.00033	10	7.3	22	48	50	76	47	77	0.90
4	5	0.00033	11	7.3	22	49	75	102	73	103	0.91
5	5	0.00038	12	7.1	22	49	100	127	97	129	0.90

Coding Sequence: ATGAAAGTCATCTACTCGCGCTTCCGCGACATGCCCGATGCACTGCAAAACCGAGGCAGCCCCAACAATATCCTCATGAAAGTCATCTACTCGCGCTTCCGCGACATGCCCGATGCACTGCAAAACCGAGGCAGCCCCAACAATATCCTCATGAAAGTCATCTACTCGCGCTTCCGCGACATGCCCGATGCACTGCAAAACCGAGGCAGCCCCAACAATATCCTCATGAAAGTCATCTACTCGCGCTTCCGCGACATGCCCGATGCACTGCAAAACCGAGGCAGCCCCAACAATATCCTCATGAAAGTCATCTACTCGCACTTCCGCGACATGCCCGATGCACTGCAAAACCGAGGCAGCCCCAACAATATCCTCATGAAAGTCATCTATTCGCACTTCCGCGAACATGCCCGATGCACTGCAAAACCGAGGCAGCCCCAACAATATCCTCATGAAAGTCATCTATTCGCACTTCCGCGAACATGCCCGATGCACTGCAAAACCGAGGCAGCCCCAACAATATCCTCAGCGCATTATTATAATGCACCGAATGCAcggtttattaaaaatactttttga
Protein Sequence: MKVIYSRFRDMPDALQNRGSPNNILMKVIYSRFRDMPDALQNRGSPNNILMKVIYSRFRDMPDALQNRGSPNNILMKVIYSRFRDMPDALQNRGSPNNILMKVIYSHFRDMPDALQNRGSPNNILMKVIYSHFREHARCTAKPRQPQQYPHESHLFALPRTCPMHCKTEAAPTISSAHYYNAPNARFIKNTF

Sequence clustering based on sequence similarity using MMseqs2