Asor014382.1
Basic Information
- Insect
- Apamea sordens
- Gene Symbol
- Mblk-1
- Assembly
- GCA_945859755.1
- Location
- CAMAOQ010000036.1:3830111-3838018[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-13 1.4e-10 41.5 0.0 1 37 78 115 78 120 0.92 2 2 1.3e-18 1.1e-15 57.9 0.0 1 43 289 332 289 334 0.95
Sequence Information
- Coding Sequence
- ATGCGTTTGAGTTGTGACGTCATGTCTTATTATGCATGGAGGTTACCGGAGGTGGGCGAGAAGGCGCCATCGTCTTCGTCCCCGAACCTCGCGGAACAGCCGCTGGACCTCAGCGCCAAGTCTACCTCCAGCACCAGTGGAACACCACCTCCTGATTCCAAGCATTTGGATAACAGATTAAAGCGAGCGGTTATGGAAAGCGCCAGCAATAGTTCTGGTCGTCGCGCGTATACTGAAGAGGAACTCCAGTCAGCTGTTCGTGACATCCAGTCGGGCCGGGTGGGCACCCGCCGAGCCGCCCTCATCTACGGCATCCCGCGCTCCACGCTGCGCAACAAACTGAACAAGTTCGGCACCGTCGTAGACAACGCCGACTCCGACAATGACAGCGATGCCGACCGCGCTGACTCGCCCCCCTCCGTCATCCTCAAAATACCCACATTCCCCCCGCCCGACGACAAGAGCCCTTCTCCCGCTGGACAACACCAGGCCCCCATCGCGCCAATAACTCCGATGCTCCCCACCGGGCACGCAGCCTCACTCAAGGGACCGTCACAACTGCTGCTTCCGCCCTCAGTGTTCGCCGACCCACCCTCAACACAACACCTCTTCACGTCCCTCAGTGACGTTATCGCTAAAAGCATTAGCCAGAAGTTCCAGCAACCCTTAGATAGGCCGCACCACCAGCCTAGTGAACTCATGTACGCGCGAGGCCCTGACCGACACGTGTCTGTCATCAAGACTCCGCCTGATAACCAGCGCTACCCTGCGCCCGGAAACTCTAAGCAGATGCCCAACAACAACGGCCAGCCGGCCACTGGCGGCAAGGGCACGCGGCCCAAACGTGGCAAATACCGGAACTACGACCGCGACAGTCTCGTGGAGGCGGTGAAGGCGGTGCAGCGCGGGGAGATGTCCGTACACCGCGCCGGCTCCTACTACGGCGTGCCGCACTCCACCCTCGAGTACAAGGTCAAGGAGCGTCACCTCATGCGGCCGCGGAAGCGCGAGCCCAAGCCGCCGCAGGACGCCAACAAACCGCAGCCACCAAAGCCGCCGCCGCCGAAGCCGCCAACGAAACCGTTCTCAAACGGTCTCAACGGGCCGGACGCCCCGGGCTATCCTCCCGGCTACCCGTTCTGGCCAGGCAGTGGTTTCCCACCGCCGCCCACTCCCGACTTGTACGCCTCGCACATGATGCGACGATTGCGCGAAGAAGCGCCACCGCCCGCCAACGGCTCGTTCCTGGAGGGTATCATCCGGTCGAGCTTGGAGCGGCCCGCGCTGATGCAGCGGCTGGCGGCGCCGCCGGGCGGCGAGGCGCGCCGGCCGCCCGTGCCAGACGGCGACGAGCCGCCGGCGCGCCGGGCGCGGCTGGACAGCTCGGACCAGGCGCTGGCGGCGGAGATGCGCGAGGCGGTGCAGCGACTGCGCGCCGACAAGCTGCGGCCGCGCAACGGCACGCccacgccgccgcccgcgccgccggccgagccgccgccgctgccggcCGCGCCGCCGGACCGCGCCTAG
- Protein Sequence
- MRLSCDVMSYYAWRLPEVGEKAPSSSSPNLAEQPLDLSAKSTSSTSGTPPPDSKHLDNRLKRAVMESASNSSGRRAYTEEELQSAVRDIQSGRVGTRRAALIYGIPRSTLRNKLNKFGTVVDNADSDNDSDADRADSPPSVILKIPTFPPPDDKSPSPAGQHQAPIAPITPMLPTGHAASLKGPSQLLLPPSVFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRPHHQPSELMYARGPDRHVSVIKTPPDNQRYPAPGNSKQMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDANKPQPPKPPPPKPPTKPFSNGLNGPDAPGYPPGYPFWPGSGFPPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALMQRLAAPPGGEARRPPVPDGDEPPARRARLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPAPPAEPPPLPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147216;
- 90% Identity
- iTF_00122280;
- 80% Identity
- -