Aepo003633.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apamea epomidion
Gene Symbol
-
Assembly
GCA_947507525.1
Location
OX382255.1:7700599-7702935[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 0.0044 6.6 7.2 2.5 18 43 9 31 5 32 0.94
2 21 0.0015 2.3 8.7 0.5 17 44 36 60 32 60 0.85
3 21 0.00058 0.86 10.1 0.1 18 43 68 90 65 91 0.87
4 21 0.0001 0.15 12.5 0.8 17 44 98 122 95 122 0.91
5 21 0.013 20 5.7 2.8 18 44 129 152 127 152 0.93
6 21 1.9e-06 0.0029 18.0 1.1 15 43 157 182 153 183 0.90
7 21 0.0025 3.6 8.1 0.5 18 44 189 212 185 212 0.90
8 21 0.0018 2.7 8.5 0.8 17 44 219 243 213 243 0.86
9 21 0.11 1.6e+02 2.8 0.1 17 44 253 277 245 277 0.81
10 21 0.66 9.8e+02 0.3 0.9 17 43 301 324 283 325 0.76
11 21 4.9 7.2e+03 -2.5 0.1 18 28 332 342 330 347 0.78
12 21 0.11 1.7e+02 2.7 0.0 15 27 358 370 354 384 0.80
13 21 0.041 60 4.2 4.3 17 43 405 428 397 429 0.89
14 21 9.1 1.4e+04 -3.4 9.5 6 29 423 446 420 458 0.70
15 21 0.0021 3.1 8.3 3.1 13 43 459 486 451 487 0.78
16 21 0.093 1.4e+02 3.0 0.6 18 44 493 516 488 516 0.75
17 21 0.31 4.6e+02 1.3 0.8 18 28 523 533 519 546 0.82
18 21 2.5 3.6e+03 -1.5 0.8 19 43 554 575 550 578 0.69
19 21 6.2 9.2e+03 -2.8 0.4 13 28 578 593 572 595 0.77
20 21 1.9e-05 0.027 14.9 2.0 5 43 604 641 603 642 0.85
21 21 1.2 1.8e+03 -0.5 0.2 17 40 661 686 652 702 0.66

Sequence Information

Coding Sequence
ATGTATCAGAATCAATTAGATTTCGTTTGCGACTACTGCTCAAGGACTTTTACAAGAAAATATAATTTACAAAGTCATATAGAAAACTGCCATATCAACTCGTCATGTCACTGTAATATCTGTGGCCAAAATTTCGGCAGTCCGGCAGGGTTGATCCAACACCTATCTAGAGGTCATAACAACTACGGCCAGCCCTTCCCGGAATGTGAATTGTGCGGACGAATTTTTAAAAGAAAACAGAACATCACATCTCATATGATTACTGTTCATCTACAAGGATTTGGGTTCGAAATTCGGTGTAGGTTGTGCGACAAAACCTTCACAACAGAACGGAATTTAAAGAGGCATATCAATCAGTTGCATAACCCTGATGTCGAGTACCCAACGTGTAACGATTGTCATAAAGTCTTTAGGGGGAAGCACTCGCTCATTGCCCATATACATTCGGTTCACAATGTGAGCGAAAGAGACGCTATCAAATGCCATCTTTGCGAGAAAGTGTACACGAATACCAGGAACTTGAAACGTCATATAGAAATGTTTCATGGCGTAAAAGGGGAGTTTAAATGCGACATCTGCCCGAAAGTGTACACTTCGAATCAGAGTTTGAGACGACACGCAAGGACACGACACAACACAGAGAGCCAGGAGCACCTAACATGCAACTTCTGCATGAAAGTCATCATTGGGCGAGAGAATTTCGAAAGCCACATACAATTCCACCACCAAGACACGGAAATGGATACTAGATATGAGTTTGTATGCGAATCTTGCGACAAAAGTTTCGAAGAAGAATTTTGTTTACGGCAACACATGAAATTAGAACACTCATTTAAAACCTTCTACAAGTACTGCAAGAAGTCGTTGCTCAAACGCTACGGCATGGATACGCAGCACATATACAACTGCGAATATTGCGACAATTCTTTCCTTACCGTCTATGAGTTAAAAGATCATATGCGCGTTAACCACGATACTGAGTACTCGCTCTCAACTTGCAACGTCTGCTTCAACAAGTTTTTTAGTAAAGAGACTAGAGCCGCACATAGAAATGTGTGTTTACCACCGCCAAATGTAAACACTTGCAGTCATTGCGACAAGCTTTTCACAGATATTTCAAGCTTAGAGTTTCATACGCGAATTTTTCACCCCCAAGCTCAAATCGCTGACTCTAACATATCATCGACAAACATAGATGAGGAAGCTGTCTCTTTCAAATGCGAGCATTGTGACCGTATCTATTACAGTGATAGATCTCTCAAACATCATATGAAGTTAAAACACACGACTGATGAAGAAGTGGAATGCGAACTGTGCAGTAAAATTTGCAGTAATAAATACTATTTGGCTTCGCATATAAAAATCGTCCATAATAACGACTCCTGGTCGAGATGTGAATACTGTGATAAACAGTTTAAATCGAAAAGAAATATCAGAAGGCATATTGAATATACTCATTTGGGCATGCAACGATACAAGTGTGTCGAATGCGAGACTCTGTTCAAAGAGAAAAGGAGTTTGAGAAAACATGTTCGGACGAAGCATCCTAACTCGGCGGCTTTCCCTCAATGCCATATATGTCACAAACGATTCGAGTCGGCGAAGTCTTGTAAAATACATCTTAAACTGTTGCATTCGTTCAACATGAACACTTACCCGTGTCACCTGTGTTCCGTATCCTTCAGCTCCAACGAAGCTTTAAATATACATCTACAAACCAAACACTTAGCCGAAGATCAAATCTACAAATGCGAAGAATGCAACTTAGTTTTCAAAGGGCAGGAAAAGTTCGACGCCCACAACGATGTCTGCCACGTCAATTTAGTCCCTACGATCAAGCAGAAAGTTCTCCCAAGATGCATTATTTGCATGAAAGATTTCAGCACAAGGAAAACTTTGAAGCGACATATAAAGAAATTCCACGAAGAATTTGATGTGGACGAGTTAGCAACTTTTGGCTCGAGACGTAGAACTTTTACAGTTGACTGCGAAGACTGCATAAAGAATTTTAACGATGATTTTTACGTGAGCGTCTATAACAAGCTGAAACATTTGAGAGACACGGAGGTGTTGAAGTGTGGGACTTGCTTCGAGTCCTACAACTCTTTAGAGTTCGCGATTCAGAGGTACAAGGTTACGAACACTGATGCTAGTAAAAGCAAAATGATTTTGAGTGAACTTTGTACCGCGGAGATGAGCGAGGACGAGCCTGACTTCTCGAACTTCGGAGCTCTGCATGATATGTTACCAGAGAGTACCACCGGCGATTTGCAAATAAAATTAGAAACTCTTGAAGATTCGGAGACTGAAATCAAGATGGAACCGCCGTCGCCGTAA
Protein Sequence
MYQNQLDFVCDYCSRTFTRKYNLQSHIENCHINSSCHCNICGQNFGSPAGLIQHLSRGHNNYGQPFPECELCGRIFKRKQNITSHMITVHLQGFGFEIRCRLCDKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFRGKHSLIAHIHSVHNVSERDAIKCHLCEKVYTNTRNLKRHIEMFHGVKGEFKCDICPKVYTSNQSLRRHARTRHNTESQEHLTCNFCMKVIIGRENFESHIQFHHQDTEMDTRYEFVCESCDKSFEEEFCLRQHMKLEHSFKTFYKYCKKSLLKRYGMDTQHIYNCEYCDNSFLTVYELKDHMRVNHDTEYSLSTCNVCFNKFFSKETRAAHRNVCLPPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIDEEAVSFKCEHCDRIYYSDRSLKHHMKLKHTTDEEVECELCSKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCVECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALNIHLQTKHLAEDQIYKCEECNLVFKGQEKFDAHNDVCHVNLVPTIKQKVLPRCIICMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRTFTVDCEDCIKNFNDDFYVSVYNKLKHLRDTEVLKCGTCFESYNSLEFAIQRYKVTNTDASKSKMILSELCTAEMSEDEPDFSNFGALHDMLPESTTGDLQIKLETLEDSETEIKMEPPSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00447464;
90% Identity
iTF_00072251;
80% Identity
iTF_00123576;