Basic Information

Insect: Apamea crenata
Gene Symbol: ZNF296
Assembly: GCA_949629185.1
Location: OX451381.1:8980427-8995512[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.5 46 5.7 0.2 3 23 120 140 118 140 0.96

2 15 0.0024 0.21 13.1 2.8 1 23 287 309 287 309 0.99

3 15 3.6e-05 0.0033 18.8 0.4 1 23 315 338 315 338 0.97

4 15 0.0046 0.42 12.1 1.6 1 23 343 366 343 366 0.94

5 15 0.002 0.18 13.3 0.7 3 23 536 556 535 556 0.98

6 15 0.00024 0.022 16.2 3.2 1 23 562 584 562 584 0.98

7 15 0.67 61 5.3 5.0 1 23 650 672 643 672 0.97

8 15 4.7 4.3e+02 2.7 0.1 2 23 680 701 679 701 0.89

9 15 0.0016 0.14 13.6 2.3 1 23 707 729 707 729 0.96

10 15 0.0042 0.38 12.3 3.0 1 23 735 757 735 757 0.98

11 15 0.34 31 6.3 7.2 1 23 766 788 766 788 0.98

12 15 5.7e-05 0.0052 18.2 0.5 2 23 861 882 861 882 0.97

13 15 0.0086 0.78 11.3 3.8 1 23 899 921 899 921 0.96

14 15 2e-06 0.00019 22.7 0.7 1 23 927 949 927 949 0.98

15 15 7e-07 6.3e-05 24.2 3.1 1 23 955 978 955 978 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.5	46	5.7	0.2	3	23	120	140	118	140	0.96
2	15	0.0024	0.21	13.1	2.8	1	23	287	309	287	309	0.99
3	15	3.6e-05	0.0033	18.8	0.4	1	23	315	338	315	338	0.97
4	15	0.0046	0.42	12.1	1.6	1	23	343	366	343	366	0.94
5	15	0.002	0.18	13.3	0.7	3	23	536	556	535	556	0.98
6	15	0.00024	0.022	16.2	3.2	1	23	562	584	562	584	0.98
7	15	0.67	61	5.3	5.0	1	23	650	672	643	672	0.97
8	15	4.7	4.3e+02	2.7	0.1	2	23	680	701	679	701	0.89
9	15	0.0016	0.14	13.6	2.3	1	23	707	729	707	729	0.96
10	15	0.0042	0.38	12.3	3.0	1	23	735	757	735	757	0.98
11	15	0.34	31	6.3	7.2	1	23	766	788	766	788	0.98
12	15	5.7e-05	0.0052	18.2	0.5	2	23	861	882	861	882	0.97
13	15	0.0086	0.78	11.3	3.8	1	23	899	921	899	921	0.96
14	15	2e-06	0.00019	22.7	0.7	1	23	927	949	927	949	0.98
15	15	7e-07	6.3e-05	24.2	3.1	1	23	955	978	955	978	0.98

Sequence Information

Coding Sequence: ATGAACCACACTGCTGCCGCAATCCCAGGAAACATGGACATTGATCCGCTGAGCTCTTACGAGTACCCAGCATACGACAGCTATGCTGCCCAGTCCTACCCGTACCCCAGCAAGCTCCAGCAGTCCATATACCAGGCATACCAACAAACTAACACCAGTTACAATAACACACAACCGCAAGAACCATTCACAAATGCACCACGAACATCACAAACTTCAATAGATATTGAAATACCTCCTAAGAATGAAGAAACAGACCCAAAACCAGTTTTGAAAAAGAGAAGGAAGGAGAAGAACGGCCAGAAGAGTACTTATTGTTCTGAGAAGATAACAGATGCTACGTTCAAGTTCTACGGTTGTTCCGTCTGTAACATCAGTTACAACGCGTTGCACGACCTGGACCAGCACGTGACAGTCCACAAGAACAGAATGACAAGCTATAGACTGCGGTTaagaaatcaatttaaaaagaaacaaattaaaaaagaaaagaaacggttaaataaaaagatggttaaaattaagaaagaaactgagtttgaaattgaaattaaacCAGAGGATGGTTATATTGGTGAAGAGAAAGCCACAGATGTTATAAGTAATGGGATTAATCCTGATTCTGAATGTAATGGGAACGTAGATAATGGTAACAGTGCAATAGAAACCCAAGATAGTCAAATTAATAACAGTAATGTCACAAATTCTATTACAAACGGCCCGCAGGATAACGAAACAAACTCTTTGAGTAACGGGAAAGGGAATAATGAAAATAGTGAATTGGAAAACGGAAATAGTAACAGTAAAGATAAGGAGAACAGTATGGACGAAGCAGAACTAAATAATTTAGAGAAAATTTACAAATGTTTTGCATGTCAGAAGCAGTTCACTTTGAGCTATTATTTGAAACTCCACGTGCGGTCACACACAGACGAGAAGCCCTACACGTGCAGCGTGTGCGGCCAGTCGTTCATCACGGCCAGCAAGCTGGGTCGCCACAACAAGCGCATCCACCTCGCCGAGCGCTACCAGTGCCGCATATGCTTCAAGATATACTCCCGGTTCGAGCTGCTGACGGCTCACTTCGACAAAACGCATCCTGAAGACAAGCTGGAGGGAGAGCCGTATGACTACAACGCGATCCTGCCGTACCTGAAGGAGCTAGAGGAACAGCTCCTCGCGCCTGAGCTGGCCGAGCTCGACAACAAGCCTAAATCTGAGGACTTGTTCTGGGAGCAGCACGTGGGCCCGCACGAGCGGGCCGGCACCAGGGCGCCCGCGGATATCAAGGAAGAGgTCGAAGACGAGGACCAAAAGGACCTGGTGCCGAAACTAGACATACTAATTGAGGAGGTGAAGGTGGACTATGACGTCACGGTCAAGCGCGAGCTGTCCGACGACGAGCCGCCGGCAGACGCGCCGGACGACGCGGATGACGGGCCGGGCGGGGCGGGGGACGGGCCGGGCGGGGCGGCGGACGGGGCCGACGTCAAGGATGAAGATAGCCAGTCGGACGAGGACTACTTCCCGTCCAACACATGGGCCGCCCCGCACGCCACCCCGCCGCGCGCGCCCTCGCCGCCCGGCCGGCGCGACGCGCGCGCGTGCGGCGTGTGCCACAAGCTCATCAGCACGGCGTCCTACATGCGCGTGCACATGCGCACGCACACGGGCGAGCGGCCCTTCAAGTGCTACACGTGCGGCCGCGGGTTCATCACCAGCAGCAAGATGCACCGCCATGTTCTCACGCACGCGCAAGACAAAGACGATCTCAAGGCGGAAGGAGAAGACACCAAACCGGAAGTGGACGACCACGCCGCGGACGAGGACCCACAGCAAGGAGATGGCGCTAAAAAACCAGCaaagaaaaaatctaaaatgaaaTCGAAGTCGTCAAAGCTGAAGAGTGGCGAGGAGAAGCCGCGCCGCAAGCACCAGAAGAGGCCGCACGCCTGCGAGTACTGCAACCAGAAGTTCCTGCACCTGAACATGCTGGAGGTGCACAGACAGTCGCACGCGGGCGAAGCCCTAGTGCTGCGCTGCCACTACTGCCTGCAGGAGGCGCCCAGCGACGCGGAGCTGCGCGCGCACGAGGCGGAGCACCAGGGGGCCAAGCCCTACCTGTGCACCGTGTGCGGGAAGACCTACAAGAAGAGGGAGACTATGGTGTACCACCGCAAGCGCCACGCGCCGGACAAGGAGTTCGTGTGCGACGTGTGCTCCAAGCGCTTCCCGGCCGCCTGCAAGCTGCACAAGCACCTGCTCACGCACCGCCGCGACGCCTTCGTGCTGCGCTACGAGTGTCCCGTGTGCGCGCACATGTTCCACACGCGCTACCACGTGCACATGCACCTCAGCACGCACCAGAAGGAGGGCCTGATCCTAGAAGAGAATCGCAGCGAGATCCTGGCGATGGTCCTCCAGAACGCGCGCAAGATCCCGCGCGCGGGCGCCTCGGCGGGCGCGCCGGCCGGGCCGGTCGGGCTGGCCCCGCCCGCCGGGCTGGCGGCACCCGCCGCCCCCCCCGCGGCCGCCAGCTCGACCCCCGCGCACGCGCTGCCGCCCGACGAGCGCTCGCGCGTGTGCAACATCTGCGGCGCTGTGTTCTCGCACTTCTACTACCTGGAGGAGCACCTCAAGAGCCACGGCGAGCGCATCGCCATCGCCGACCTCGACAAGCCGGAGGACAAGAAGTACATCTGCCAGATCTGCAACAAGGGCTTCAAGCTGCACTACTACCTCAAACTGCACAGCTTCACGCACTCGAAGGAGAAGCCCTTCATCTGCCAACAGTGCGGGAAAGGGTTCATCACGAAAGGTAAACTAAAAAGACATCTGGAGACTCACACGGGGCTGAAGAAGTACCAGTGTCACATCTGCTACAAGTTCTTCACGCGGCCCAGCTACCTGCGCATACACGTGCGCACGATACACGGCACGCAGGACTATAACTTTAGGTTCGACAAGGGCTACGGACTCGCCTCGCTCGCGCCGGCCGTGGCGCTGTCAGATGTCAGTCAGAATAGTATTTAA
Protein Sequence: MNHTAAAIPGNMDIDPLSSYEYPAYDSYAAQSYPYPSKLQQSIYQAYQQTNTSYNNTQPQEPFTNAPRTSQTSIDIEIPPKNEETDPKPVLKKRRKEKNGQKSTYCSEKITDATFKFYGCSVCNISYNALHDLDQHVTVHKNRMTSYRLRLRNQFKKKQIKKEKKRLNKKMVKIKKETEFEIEIKPEDGYIGEEKATDVISNGINPDSECNGNVDNGNSAIETQDSQINNSNVTNSITNGPQDNETNSLSNGKGNNENSELENGNSNSKDKENSMDEAELNNLEKIYKCFACQKQFTLSYYLKLHVRSHTDEKPYTCSVCGQSFITASKLGRHNKRIHLAERYQCRICFKIYSRFELLTAHFDKTHPEDKLEGEPYDYNAILPYLKELEEQLLAPELAELDNKPKSEDLFWEQHVGPHERAGTRAPADIKEEVEDEDQKDLVPKLDILIEEVKVDYDVTVKRELSDDEPPADAPDDADDGPGGAGDGPGGAADGADVKDEDSQSDEDYFPSNTWAAPHATPPRAPSPPGRRDARACGVCHKLISTASYMRVHMRTHTGERPFKCYTCGRGFITSSKMHRHVLTHAQDKDDLKAEGEDTKPEVDDHAADEDPQQGDGAKKPAKKKSKMKSKSSKLKSGEEKPRRKHQKRPHACEYCNQKFLHLNMLEVHRQSHAGEALVLRCHYCLQEAPSDAELRAHEAEHQGAKPYLCTVCGKTYKKRETMVYHRKRHAPDKEFVCDVCSKRFPAACKLHKHLLTHRRDAFVLRYECPVCAHMFHTRYHVHMHLSTHQKEGLILEENRSEILAMVLQNARKIPRAGASAGAPAGPVGLAPPAGLAAPAAPPAAASSTPAHALPPDERSRVCNICGAVFSHFYYLEEHLKSHGERIAIADLDKPEDKKYICQICNKGFKLHYYLKLHSFTHSKEKPFICQQCGKGFITKGKLKRHLETHTGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRFDKGYGLASLAPAVALSDVSQNSI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121693;
90% Identity: iTF_00121693;
80% Identity: -