Aanc021459.1
Basic Information
- Insect
- Apamea anceps
- Gene Symbol
- Zfy1
- Assembly
- GCA_951799955.1
- Location
- OX637519.1:19354215-19359736[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.048 4.1 8.9 0.3 2 23 245 266 244 266 0.97 2 13 0.18 15 7.1 0.4 6 23 278 296 278 296 0.95 3 13 1.8e-07 1.5e-05 25.9 0.6 2 23 352 373 352 373 0.97 4 13 3.9e-05 0.0033 18.6 2.7 1 23 379 402 379 402 0.96 5 13 0.0046 0.39 12.1 0.0 1 23 408 430 408 430 0.97 6 13 1.5e-06 0.00012 23.1 2.0 1 23 436 458 436 458 0.98 7 13 0.41 35 6.0 3.5 1 23 578 600 578 600 0.95 8 13 0.0004 0.034 15.4 2.0 2 23 607 629 606 629 0.92 9 13 4.2e-06 0.00035 21.7 1.5 1 23 635 657 635 657 0.98 10 13 1.2e-06 0.0001 23.3 4.4 1 23 663 685 663 685 0.98 11 13 0.00012 0.0099 17.1 0.2 1 23 691 713 691 713 0.98 12 13 0.00028 0.023 15.9 2.2 1 23 719 741 719 741 0.93 13 13 0.00093 0.078 14.3 1.7 1 23 747 770 747 770 0.93
Sequence Information
- Coding Sequence
- atgaatgataaaaatgatcCAATCCTTTTACATCCTGCCCCGAACCTACCTCCGACCATCGTGCAGAAGATGAGCATACTGGTACCGTTGCTCAACTCGCCCACTAACCTTAGTAATGTCCGAGACTTCTCAAATGTGTGTCggacatgcgccaccatcacaGAGTTTGTTATGCCCATATTCAGTGGAGAAGGACTGCAGAACAACTTAGCTGATAAAATAAAGAGACACCTACCAATACAGGTACAGGAGAATGACGAGCTACCGTTGGTGGTGTGCTACCAGTGTTCGAGCACGCTGCTGGCATGGCATGAGCTGGTGAAGTGTTCCATACAGGCCGATGCAGCCCTGCGTGCAAAGATCTCCAGCCAACGGaaaaCAAATCCACCTAACGTTACCGTTAAATCAAGTTCAAGTGTACAAGAGGAAGCACAGAGCAAGTTGTTTTACAAGAGTGTCAGAAATGCTCTCATTGACTTTCATATTGATCTGGATGAAGATGATACGGACGTAGAGTTTGTCTGCCAAAAGTGTGTGGAGAAGCCATCGCTGACCACTTTGCACAGCCTCGCTGAACATATCCGACACGACCACTCTCCTGAACCACTCGACAATACTGTTAAAACATTCATCACCAACTACATAACGTTCGAACAAGTGCTAGCGGAGGATTCAGACAGAGAAACACAATCAGACACTAAAGAGAAATCTCAAACAATTCTGCCGAGCCTGCGCTGTCCGTTCTGCGCGAGTGTGTTCTCTTCGGCCACGCGGCTCGTGTACCATCTCAACAAACACGTGGAGGTGAGCATGGCAGCCGGCGCCGAGTGCTGCGACTTCGTCTACAGCGACAAGAAACACTTCGTGCAACACTTGCAAGAGGCACACGTCGACAGGACAGCCGACGAGCCAGTGCCGTTGTGCGTCAGCTGTGGCTTCACCGCACACCATGCCGAAGAAATGAGACAGCATTATAAAGATGCGCACAACGATGTGAAAAGtgcgaaaaagaaaaaagtagagAGTCCAAACAACCAGAAGTACATCCCAGCTGTGTGCCCCGAGTGCAACAAGACGTTCTCTAATAAGTACAACATGTTCGCGCACATGCGCGGTCACACGCACACCGCGGTCTACCCATGCGACAAATGCACGCGGACCTACCGCAACCAGGGGAACCTCACCCATCACAAGAAGCTCGCGCACCAGGGAATACTCAACTTCATTTGCGTCGAGTGCGGGGAGGCGTTCCCCAGTCGGTCGGAGCGCGACATACACGCGCGCATACACTCGGGAGAGACGCCCTACAAATGCCCGCACTGCGGCAAGTCGTACCGCGCCAAGAACACGCTCACACGACACCTCGAGATACACGCAGACATACGCAAATACGAGAGCCCCTGCGACTTGCCCGAAGATCCCCGCAGTGCCCCTTCTGACCTTTCCGAGCTGTCTGATGACGAGCCGCTGGCCACGTTCGCTACCAAAAAGCCCGCGAAACTCTATAACAACTTCTACAGAGCACTCGTGAACTTTAGAGACCATTTTGTTAATGATCAACATCATGAGGATTATCCTGACTTCACCGACTCGAGTGTGTCTGACGCTGAAGAGAATGACGTGGACAGGTTCGACGACCTGACGCAGTGCAACATGAGGCGAGACAGATTGGACGAGGAGACGAGGTTAGAGCTGAGAGAAGTGCAGAACAAAATCGACAACAAGACATACTACACGTGTAAGATCTGCAGCAAGAACCTGAGCTCTGCGCACACGTACTTGTTCCACAAGCGCATCCACACGGGCGAGCGGCCGTGCGTGTGCCACGTGTGCGGCAAGCAGTTCCGCGCGCCCAACGGACTGCAGCGGCACCTCACGGAGACGCACGAGCGCGTGCGCCGGTACAACTGCTCGCTCTGTACTAAGAACTTTGCCAACTCACAGAATCTCAAGCAACACTTACGGATACACACCGGAGAGAAGCCTTTCGTGTGTTCTCACTGCGGGAAGAGGTTCACTCAGAGTGGTTCATTACACGTGCATCTGAAGACACACAGTGAACACTTTCCTTATGAGTGCGCGGAGTGCGGGGCTAAGTTCAGACTGCGGTCGGGGCTGGTGCGGCACAGACTGAAGCATACGGGCGAGCGGCCGCACGTGTGCGCGACGTGCGGCAAAGGCTTTCGGCAGAGACACGAGCTCACGACGCACAGCCTCGCGCACAGCGGCGCCGCGCCGCACGCCTGCGCCGCCTGCCCGCGCGCCTTCCGCCAGCGCCGCGCGCTGCGGCACCACGTGCGGCGCGTGCACGAAGCGGGGCCTCCCGACATCGCCTACAACGTCACGCACTACTAG
- Protein Sequence
- MNDKNDPILLHPAPNLPPTIVQKMSILVPLLNSPTNLSNVRDFSNVCRTCATITEFVMPIFSGEGLQNNLADKIKRHLPIQVQENDELPLVVCYQCSSTLLAWHELVKCSIQADAALRAKISSQRKTNPPNVTVKSSSSVQEEAQSKLFYKSVRNALIDFHIDLDEDDTDVEFVCQKCVEKPSLTTLHSLAEHIRHDHSPEPLDNTVKTFITNYITFEQVLAEDSDRETQSDTKEKSQTILPSLRCPFCASVFSSATRLVYHLNKHVEVSMAAGAECCDFVYSDKKHFVQHLQEAHVDRTADEPVPLCVSCGFTAHHAEEMRQHYKDAHNDVKSAKKKKVESPNNQKYIPAVCPECNKTFSNKYNMFAHMRGHTHTAVYPCDKCTRTYRNQGNLTHHKKLAHQGILNFICVECGEAFPSRSERDIHARIHSGETPYKCPHCGKSYRAKNTLTRHLEIHADIRKYESPCDLPEDPRSAPSDLSELSDDEPLATFATKKPAKLYNNFYRALVNFRDHFVNDQHHEDYPDFTDSSVSDAEENDVDRFDDLTQCNMRRDRLDEETRLELREVQNKIDNKTYYTCKICSKNLSSAHTYLFHKRIHTGERPCVCHVCGKQFRAPNGLQRHLTETHERVRRYNCSLCTKNFANSQNLKQHLRIHTGEKPFVCSHCGKRFTQSGSLHVHLKTHSEHFPYECAECGAKFRLRSGLVRHRLKHTGERPHVCATCGKGFRQRHELTTHSLAHSGAAPHACAACPRAFRQRRALRHHVRRVHEAGPPDIAYNVTHY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01230874;
- 90% Identity
- iTF_00123588;
- 80% Identity
- -