Aanc026399.1
Basic Information
- Insect
- Apamea anceps
- Gene Symbol
- -
- Assembly
- GCA_951799955.1
- Location
- OX637525.1:13427495-13464555[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 2.9 2.5e+02 3.3 0.2 1 23 529 551 529 551 0.94 2 35 0.0072 0.61 11.5 1.7 1 23 561 583 561 583 0.96 3 35 0.0014 0.12 13.7 0.9 1 23 589 611 589 611 0.98 4 35 0.0014 0.12 13.7 0.9 1 23 633 655 633 655 0.98 5 35 0.0014 0.12 13.7 0.9 1 23 677 699 677 699 0.98 6 35 0.0014 0.12 13.7 0.9 1 23 721 743 721 743 0.98 7 35 0.0014 0.12 13.7 0.9 1 23 765 787 765 787 0.98 8 35 0.0014 0.12 13.7 0.9 1 23 809 831 809 831 0.98 9 35 0.0014 0.12 13.7 0.9 1 23 853 875 853 875 0.98 10 35 0.0014 0.12 13.7 0.9 1 23 897 919 897 919 0.98 11 35 0.0014 0.12 13.7 0.9 1 23 941 963 941 963 0.98 12 35 0.0014 0.12 13.7 0.9 1 23 985 1007 985 1007 0.98 13 35 0.0014 0.12 13.7 0.9 1 23 1029 1051 1029 1051 0.98 14 35 0.0014 0.12 13.7 0.9 1 23 1073 1095 1073 1095 0.98 15 35 0.0014 0.12 13.7 0.9 1 23 1117 1139 1117 1139 0.98 16 35 0.0014 0.12 13.7 0.9 1 23 1161 1183 1161 1183 0.98 17 35 0.0014 0.12 13.7 0.9 1 23 1205 1227 1205 1227 0.98 18 35 0.0014 0.12 13.7 0.9 1 23 1249 1271 1249 1271 0.98 19 35 0.0014 0.12 13.7 0.9 1 23 1293 1315 1293 1315 0.98 20 35 0.0014 0.12 13.7 0.9 1 23 1337 1359 1337 1359 0.98 21 35 0.0014 0.12 13.7 0.9 1 23 1381 1403 1381 1403 0.98 22 35 0.0014 0.12 13.7 0.9 1 23 1425 1447 1425 1447 0.98 23 35 0.0014 0.12 13.7 0.9 1 23 1469 1491 1469 1491 0.98 24 35 0.0014 0.12 13.7 0.9 1 23 1513 1535 1513 1535 0.98 25 35 0.0014 0.12 13.7 0.9 1 23 1557 1579 1557 1579 0.98 26 35 0.0014 0.12 13.7 0.9 1 23 1601 1623 1601 1623 0.98 27 35 0.0014 0.12 13.7 0.9 1 23 1645 1667 1645 1667 0.98 28 35 6.1e-05 0.0051 18.0 1.5 1 23 1674 1696 1674 1696 0.99 29 35 6.1e-06 0.00052 21.1 0.4 1 23 1702 1724 1702 1724 0.93 30 35 1.4e-06 0.00012 23.2 0.2 1 23 1730 1752 1730 1752 0.98 31 35 6.1e-05 0.0052 18.0 2.7 1 23 1758 1781 1758 1781 0.96 32 35 0.00028 0.023 15.9 2.6 1 23 1787 1810 1787 1810 0.96 33 35 0.00021 0.018 16.3 2.3 2 23 1817 1838 1816 1838 0.97 34 35 3e-05 0.0025 19.0 1.0 1 23 1844 1866 1844 1866 0.97 35 35 0.078 6.6 8.2 0.1 1 23 1872 1896 1872 1896 0.93
Sequence Information
- Coding Sequence
- ATGAACCAGTGTTGCTTTATCTGTAACAACAGGGCTGGCCTCTCACTAAGAAATGCTTCCAGCCTGTTTGGAGAACATaaCACATTACAATCAGGAAAGAAAGTATCGGAAGTTGTGAGTGAGATTGTGGGCAAACCGGTGCAAGAAAATAAAGTACATACCAATATACTGTGTAAGAAATGCTTTAAGACATGCTCTGAGTATGATAGCATTCAAGTCAGattacaaacaataaaaacggATTTACTAGGTCAATTCAAATTATCGttacctaattataatttagACTATGAAAACTATGAGCAGAATGTCTCTTCACCGCCCAAACCTAAACCACTCCTGGGAAAGAAGTTGGTGTTGCCAGCATCAAAATTACAACCAATACCACCGGATTTGTTGCTCAAAGTGGGGAAATTGGCATCATTCTCCAAATCAAACATGATTTTACCACAACTTAAgccggcCACAGCCTCAACATTAAACCTCAAAGTGACCGTCGGATCATCAGTCCTAACACAAACGATAAAAACATCAACCAGTAAACCAATTGAGAAACCTGCTTTAGACTCAAATTCCATCCTGACTTCGCTCTCCAACGCTTTGAAAGATGACATAGAAAGAATGGTAACTACTCAAAGTAATATGAACCCTATGAGCCAAAAGAATTCAATATTGAGTTTTAATGTGAACTCTTTGCCTAAGGATTTTCTTTCTGGCGCCATTTTGAGGAAAATTGATGAAAAGGATGATGACTATGAAAAGGGGGAGGAGACTAATGAGGATCATCCTATGGAGATTGATGAAGATTGTTTGTCTGTGGTTCCTGTGACGTCTGCTGATGGTGGAAACTTAGTATTACAAGTTGAAGGACTACAGTCGAAATCCGACCCTACTGCCGAAGTGAGCGAATACCTAAACCTGCcgtcgctagatggcgctggtgAAGAGAGTGACGCACAGAAGTACATCCTCGGCAAGTTGGAGATCCTCAACGAGGAGGATgaagacgacgacgacgatgaAGGACACACGATAGTCGTAGACAGTGAAAACGGCTCAATTCTCCGGATGGTGGCCGGACAGAAGTTCATATACGAGGGTGGAGAGATATCGTTGGTGATGCCCGATGATGATGAGCAGCGCGACGGTGATAATGACCATCTCGAGAATGGTGATAGTCAAGATTCTAATGATGAATCTCAGATCGAGTTACAAGTATCTGGCGACGAGGAAACTGCGAACGCTATTATTGCAGCAGCTCAGGAACAAGGCGGCGCCTTCATCAAGGTAGAGTCTGGCGAGATGTTCCGCGTGAAGTCTGTGTGCAGCGCGGGCAGTGGGGTTAGCGCGGGCAGTGGGGTTGGCGCGGGCAGTGGGGTTGGCGCGGGTAGTGGGGCCGGCGCGGGCAGTGGGGCCGGCGCGGGCAGTAGcagccccgcgccgcccgacgCGCTGCAGATCGTGGCGCAGGAGGGGAACCTGTTCAAGTGCTTGCTGTGCGAGAGGAATGATGAAACCCCTTCAAGTGTTGAAGATGCAGACAGAATGATGCGTCACTTAAAGTCACAGCACGACGCGAGGATATACCTGTGTCGCTTCTGTGGCGCCGTCATGAGGAAACGCACAGAATATGCCACTCATATAGCGTCGCacgcggcgccggcgccgggcgcgcgcgcgcaccGCTGCGGCGCGTGCGGCAAGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGTGCTACAGCTCGCGCACGCTGCTGGCCGAGCACGCCAACCTGCACTCGGGCGCGCGGCCCTACGCCTGCGCGCTGTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTGAAGACCCATGCGGTGCGCCCGCGTCCCTACAAATGCGCACAATGCGGTAAATCGTTCCTCACGCAACAAAATCTAAATCAGCATGAGAAAACACATTCAGGAGTCAGGGATTTCGTCTGTAATATATGCAACAAAGCCTTCAGTACACAACACAACTTGGAAGTGCACGGCGTGGTCCATTCCGGGAACAAGGCGTTCGTGTGCACCGTGTGCAGCAAGGCGTTCGCGAGGAGAGCCGAGCTGAGGGACCACATGCGGATACACACGGGCGAGCGGCCGTTCTCGTGCGACATCTGCGGCTCGCGCTTCACGCAGCGCTCCAACCTGCACTCGCACCGCAGAGCGACGCACTTCGACGACAAGCGGTACCACTGCGAGCTGTGCCCGAAGAGGTTCAAGAGAAGGAGATTACTGGAGTACCACATAAAGGCGTCGCACACTGGCGAGCGGCCGCTCAAGTGCGGCATCTGTCACCTGTCGTTCGTGTACCCCGAGCATTACAAGAAGCACGTGCGGATACACAGCGGGGAAAGGCCTTATGTTTGTGAGATCTGCGGCAAGTCGTTCAACTCGCGCGACAACCGCAACACGCACCGCTTCGTGCACAGTGACAAGAAGCCCTACGAGTGCGTCGCGTGCGGCGCCGGCTACATGCGCAAGCAGCTGCTCTACGCGCACATGAACACCAGCGGACATCTGGCGGAGTCGATAGTAGTCAATCAACCCAGGGTGATCAAAGTTACTGAAAatGGCACGAACCAACCAACAGAAATCGCACACATAGAAGCGAAAAATAGTAAATTTGATGCGatgttTGAGGACAGTGAATTGGAGGCGAGCGTGAAGTCTGTCgTAAAAGCGGAGGCGGAAGTGCATCTAGAAGGCACCAAGTTCTACATAACGGAAGATAAGAAGTTAATATTACAAGATAGTGATAAGACAACTTTAAATCTAATACAAGAGGGCGATGAGTCTACGTTGCTAACTATACATAATATAGGAGAGAGAGCCGAGGGCGCTGTACTGGAGGCTGTAGCTGCCGACCAACTCGGAGAACAGACTGAGatcGTAGCAAATGACGAAAATGGCGGTATGGTGCGTTTAATACAAATCAAACTGCCGGACGGGAACAACGGATGGGTCGCTATCAACCGCTGA
- Protein Sequence
- MNQCCFICNNRAGLSLRNASSLFGEHNTLQSGKKVSEVVSEIVGKPVQENKVHTNILCKKCFKTCSEYDSIQVRLQTIKTDLLGQFKLSLPNYNLDYENYEQNVSSPPKPKPLLGKKLVLPASKLQPIPPDLLLKVGKLASFSKSNMILPQLKPATASTLNLKVTVGSSVLTQTIKTSTSKPIEKPALDSNSILTSLSNALKDDIERMVTTQSNMNPMSQKNSILSFNVNSLPKDFLSGAILRKIDEKDDDYEKGEETNEDHPMEIDEDCLSVVPVTSADGGNLVLQVEGLQSKSDPTAEVSEYLNLPSLDGAGEESDAQKYILGKLEILNEEDEDDDDDEGHTIVVDSENGSILRMVAGQKFIYEGGEISLVMPDDDEQRDGDNDHLENGDSQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVKSVCSAGSGVSAGSGVGAGSGVGAGSGAGAGSGAGAGSSSPAPPDALQIVAQEGNLFKCLLCERNDETPSSVEDADRMMRHLKSQHDARIYLCRFCGAVMRKRTEYATHIASHAAPAPGARAHRCGACGKCYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHACYSSRTLLAEHANLHSGARPYACALCGKAFASKYTHQAHLKTHAVRPRPYKCAQCGKSFLTQQNLNQHEKTHSGVRDFVCNICNKAFSTQHNLEVHGVVHSGNKAFVCTVCSKAFARRAELRDHMRIHTGERPFSCDICGSRFTQRSNLHSHRRATHFDDKRYHCELCPKRFKRRRLLEYHIKASHTGERPLKCGICHLSFVYPEHYKKHVRIHSGERPYVCEICGKSFNSRDNRNTHRFVHSDKKPYECVACGAGYMRKQLLYAHMNTSGHLAESIVVNQPRVIKVTENGTNQPTEIAHIEAKNSKFDAMFEDSELEASVKSVVKAEAEVHLEGTKFYITEDKKLILQDSDKTTLNLIQEGDESTLLTIHNIGERAEGAVLEAVAADQLGEQTEIVANDENGGMVRLIQIKLPDGNNGWVAINR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -