Basic Information

Insect: Apamea anceps
Gene Symbol: -
Assembly: GCA_951799955.1
Location: OX637507.1:15206618-15212215[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0015 1.7 9.6 4.5 18 38 28 49 22 52 0.91

2 14 0.021 24 5.9 3.1 6 32 45 71 44 78 0.75

3 14 0.014 16 6.4 2.5 6 33 69 100 67 106 0.71

4 14 0.024 27 5.7 4.1 5 38 100 133 97 134 0.77

5 14 0.0014 1.6 9.6 1.4 5 38 128 161 125 168 0.85

6 14 0.042 47 5.0 6.5 13 38 163 189 156 195 0.80

7 14 0.022 24 5.9 4.8 17 38 195 217 185 223 0.84

8 14 0.088 99 3.9 2.4 6 32 213 239 212 251 0.73

9 14 0.19 2.2e+02 2.8 4.5 18 38 252 273 240 274 0.84

10 14 0.013 15 6.6 4.5 6 33 269 296 265 302 0.78

11 14 0.0055 6.2 7.8 1.4 14 33 304 324 296 329 0.75

12 14 0.0004 0.45 11.4 4.6 6 38 325 357 324 363 0.85

13 14 0.0018 2 9.3 3.5 15 38 361 385 358 385 0.91

14 14 4.7 5.3e+03 -1.6 0.7 17 26 426 435 418 448 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0015	1.7	9.6	4.5	18	38	28	49	22	52	0.91
2	14	0.021	24	5.9	3.1	6	32	45	71	44	78	0.75
3	14	0.014	16	6.4	2.5	6	33	69	100	67	106	0.71
4	14	0.024	27	5.7	4.1	5	38	100	133	97	134	0.77
5	14	0.0014	1.6	9.6	1.4	5	38	128	161	125	168	0.85
6	14	0.042	47	5.0	6.5	13	38	163	189	156	195	0.80
7	14	0.022	24	5.9	4.8	17	38	195	217	185	223	0.84
8	14	0.088	99	3.9	2.4	6	32	213	239	212	251	0.73
9	14	0.19	2.2e+02	2.8	4.5	18	38	252	273	240	274	0.84
10	14	0.013	15	6.6	4.5	6	33	269	296	265	302	0.78
11	14	0.0055	6.2	7.8	1.4	14	33	304	324	296	329	0.75
12	14	0.0004	0.45	11.4	4.6	6	38	325	357	324	363	0.85
13	14	0.0018	2	9.3	3.5	15	38	361	385	358	385	0.91
14	14	4.7	5.3e+03	-1.6	0.7	17	26	426	435	418	448	0.77

Sequence Information

Coding Sequence: ATGTGGCCAGGCCGGTGCTCGCAGGCAGCGGCCAGCGCACGCCTTCTGATAATTGAAGGTCGGAACGGTGAAACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGCGAACTGTGCGGCAAGTCGTTCACGAGAAAGGAACACTTCACCAATCACATACTGTGGCATACGGGAGAAACCCCTCACCGCTGCGATTTCTGTTCCAAAACTTTCACTCGTAAGGAGCATCTCCTGAACCACGTCCGCCAACACACGGGCGAGTCGCCTCATCGCTGCAACTTCTGCAGCAAGTCATTTACACGCCGTGAACACCTTGTCAACCACGTGCGACAACACACCGGCGAAACCCCCTTCCAGTGCGGATACTGTCCTAAAGCGTTCACAAGGAAAGATCACCTCGTGAACCACGTTCGTCAACATACAGGCGAATCCCCGCACAAGTGCTCGTATTGCACAAAGTCCTTCACTCGCAAGGAACACCTGACGAATCATGTGCGACAACACACGGGCGAGTCTCCGCACCGATGTACCTACTGCGCCAAGTCCTTCACGAGGAAGGAACACCTCACTAACCACGTTAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGAGGGCCTTCGCACGCAAGGAGCATCTCAACAACCACATCCGACAGCACACCGGCATCACTCCGCACGCCTGCTCCTACTGCAGCAAGAGTTTCACCAGGAAGGAACATCTCGTTAACCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTACTGTTCAAAGTCGTTCTCTCGTAAGGAGCACCTCACGAACCACGTGAACCTTCACACAGGAGAAACGCCACACAAATGTCCCTTCTGCACAAAAACATTTTCCAGAAAGGAACACTTGACCAACCATGTCAGGATTCACACGGGCGAGTCTCCGCATCGCTGCGACTTTTGTCAGAAGACGTTTACTCGTAAGGAGCACTTGACGAATCATCTGAAGCAGCATACCGGCGACACCGCACACGTCTGCAAGGTGTGCTCCAAGAACTTCACCAGGAAAGAACATCTTGTCACACACATGAGGTCGCACAGTTGTGGCGAGCGTCCATTCAGTTGCGGCGAGTGCGGCAAATCTTTCCCATTGAAAGGCAACCTACTATTCCATGAACGATCCCATGCCAAGAACAATGCTAATGCTGCCAATAAGCCGTACCGATGTGAAGTCTGCTCCAAAGAATTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGCACACACGCGGAGTGGGTGGAAGGCGCCACGACCGGCGAGGCACCCGCTGAAACAGAAGACTGTACTGATAATAAGTGTATCAAAGTCGAGCCAGAACGAACTGAAAGAAAACATGAAGTCAGgaCGACAGTCGAAACAAGACCAGCTGAGACCAATGTCGCACAAAGTCAGCCAAACACAGCTACTGTGATGATAACCAATAATCAACAAGTGCGCGCGGCGACCGTGAGCGCGGTGGGCGCTGTGGGCGCGGTGGGCTCcgtgggcggcgcgggcgcgcccACGttcgcgcacgccgcgccgcaccaCGCCGGCGCCAACATCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MWPGRCSQAAASARLLIIEGRNGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGITPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKNFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHAKNNANAANKPYRCEVCSKEFLCKGHLVSHRRTHAEWVEGATTGEAPAETEDCTDNKCIKVEPERTERKHEVRTTVETRPAETNVAQSQPNTATVMITNNQQVRAATVSAVGAVGAVGSVGGAGAPTFAHAAPHHAGANIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121664;
90% Identity: iTF_00121664;
80% Identity: iTF_00121664;