Aanc008047.1
Basic Information
- Insect
- Apamea anceps
- Gene Symbol
- clz9
- Assembly
- GCA_951799955.1
- Location
- OX637506.1:14420132-14422162[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.9e-07 0.00013 22.4 0.1 18 40 30 52 16 57 0.80
Sequence Information
- Coding Sequence
- ATGGTATATAATTACACAAGACGAACACTGAGAGCTTCTTGGTCGGAGCGTACGATGCGAGAAGCTATTAACGAAGCCAAAAAAAGTAGCATCAAAGGAGCTTCCTTAAAATATGGAATACCATATAGCACATTACAGCGACGTGTCAAGACAGGGTCTTCTATTAAGAAACTAGGCAGGTTCACTCCTATTTTTACAGACGCAGAAGAACTGGAGCTAGTACAGCATCTTAAGGACCTAGACGCACTCTTTTACGGTCTTACCAAGACAGAATTCTTGCAATTAGTTGGTGAGTTTGCCAAgcgcaaaaataaacaaacgccTTTTAAAAGCAATGTGGCAGGCAAACAATGgtacaaaaactttaaaaaacgtCACCCAGAAATTGTATTGCGAACCCCTGAATCTACATCCATAGCTAGGCTACAAGCATTTAATAAACCAGCGGTGAATAGGTTCTACGATTTATTACAAGATATcgtagaaaaagaaaatatcagGCCAGACATGATCTTTAACATGGATGAAACAGGTGTCAGAACATCATCTACAAAACAACCCAAGGTACTGTCAATTTATGGAAAAAAGCAAGTAGGGGCGGTTAGCAGCTTAGAAAAGGGGACACTTACAACAGTTGTCTGCTGCTGCAGTGCATCTGGAAATTTTGCACCACCGCCCTTCTTCATTTTCAAAAGGAAAAGATTCCAAGCTAGATTGCTTGATGGTTCCATGCCAGGATGTGAAGCTTCCGTTTCTGATAGTGGGTGGATTAGTGGCGAAATATTTTTGGAGTGGATTCGAGTTTTTGTCAGTTGGGTCAGACCAACTCAAGATTGTAAAGCTTTGCTACTTTTAGACAATCACGAGTCGCATAAGTATTATCCTGCTTTGGAGTACGCCACCAGcaacaatgttgtatttttgacGATACCGCCTCATACATCCCACAAATTGCAACCACTCGACGTGGCTGTATATTCACCGTTCAAAAACTTTTTCGAAATTGAAATCAATAAATTTCAAAAGGCTCATCCAGGTCGAGTGATCGGACAGTATGATATTGCAAGATTAGTGACTCAAGCTTATTTAAAAGCAGCCACACCACAAAATGCTTTAAGTGGCTTTCGAGCAGCCGGAATTCAACCGTATGATCGACATTCTATTCCAGAAGAGTATTTTGCACCTGCTGCTGTTTACTGTCGAGACCAGGATATTCCAGTTGCAGAAACCGTAGAGATTTTGAGTGCTGGATCTGATAGTGTTGAACAGCAGCCTGTAAATGTTCATGTGCCTGAACCAGTGGACATCACAGGGGCTGGATCTCAAAGTGTTGCACAGCAGCTGGAAAATGTTTCTGAGCCTGAACCAGTGCAGACCACGGGGGCTGCATCTGAAAATGTTAAACAGCAGCCGGAAAATGTTCCTGATCAAGACCCGGTGGAGATCACAGCTGCTACATCAAATAGCGGACCTGACGTTGTACATAACGAAGCTTCTCCACGAAGTGAAAGTGTTCTTTCAGAATACATTCCATCTGAGCTGAATATTCCGAACATAGATCCAATGGATGGAACAACTACACCACCAATTGACAGGTCTCAGAATATCAGTATTCTTCAGGAAATATATCCATTGCCTCAAGATGTAGAGAAAAAGACAAACAGACGTAGAAAGCTGCAAAAATCAGAGGTGTTAACAAGTACGCCCATCAAAATCCAACAAaaagataaatttgaaaaagcgAAGATAAAGCAGGAAAAGACGAAGACAGCgaagaaaaaaacacaaaaggaaAACCGCAAAAAGGCAAATCCGTCGACGTCTGGTTTAGCAAAGCATCAGAAGAGAACTTCTACAAACCAGCCTAAACCAAGAGAAAAAGactgtttttgtttagtttgtaaagAAATATATGTAGATCCTCCGACAGAAGACTGGATTATGTGTTCACAGTGTCAAGAATGGGCACACGAATCTTGCACTTCATACAATGGTCATGGATCctatttttgtgatttttgcTTTGATTAG
- Protein Sequence
- MVYNYTRRTLRASWSERTMREAINEAKKSSIKGASLKYGIPYSTLQRRVKTGSSIKKLGRFTPIFTDAEELELVQHLKDLDALFYGLTKTEFLQLVGEFAKRKNKQTPFKSNVAGKQWYKNFKKRHPEIVLRTPESTSIARLQAFNKPAVNRFYDLLQDIVEKENIRPDMIFNMDETGVRTSSTKQPKVLSIYGKKQVGAVSSLEKGTLTTVVCCCSASGNFAPPPFFIFKRKRFQARLLDGSMPGCEASVSDSGWISGEIFLEWIRVFVSWVRPTQDCKALLLLDNHESHKYYPALEYATSNNVVFLTIPPHTSHKLQPLDVAVYSPFKNFFEIEINKFQKAHPGRVIGQYDIARLVTQAYLKAATPQNALSGFRAAGIQPYDRHSIPEEYFAPAAVYCRDQDIPVAETVEILSAGSDSVEQQPVNVHVPEPVDITGAGSQSVAQQLENVSEPEPVQTTGAASENVKQQPENVPDQDPVEITAATSNSGPDVVHNEASPRSESVLSEYIPSELNIPNIDPMDGTTTPPIDRSQNISILQEIYPLPQDVEKKTNRRRKLQKSEVLTSTPIKIQQKDKFEKAKIKQEKTKTAKKKTQKENRKKANPSTSGLAKHQKRTSTNQPKPREKDCFCLVCKEIYVDPPTEDWIMCSQCQEWAHESCTSYNGHGSYFCDFCFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01026089;
- 90% Identity
- iTF_01093030;
- 80% Identity
- -