Aanc011571.1
Basic Information
- Insect
- Apamea anceps
- Gene Symbol
- -
- Assembly
- GCA_951799955.1
- Location
- OX637509.1:17329538-17331289[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-09 3.8e-06 27.3 0.2 5 43 1 39 1 41 0.88
Sequence Information
- Coding Sequence
- atgaaggaTGCAATCTCAGCGGTTCGTAGCAAAAGAATGGGATGGCAAATGGCAGCAAAGGCATATCAAGTTCCAGCTACTACTCTTCGACGCCGAGCAGAAAAAGGTGAAACCTCTAAAGGGTATCTAGGTGGTCACAAAGCTACATTTACCAGAAATCTAGAAAAAGAAATAGTTGACCATTTACAACAGCTAGAGGTGCGTTTTTATGGAATGACTACGACTGATTTAAGAAAACTTGCCTACCAAATAGCTGTAGCTAAGAAACTACCCCATAGATTCTCTTCTGAAAATGAAATGGCTGGTATAGACTGGCTCAGAGGTTTTAGGAGACGAAGCCCGTCCATATCACTTCGAATTCCTGAAGCTACGTCAGCAACGAGAGCGCGAGGATTCAACCGAGTCCAAGTGGAAACATTCTTCAAATTGTTGATTGAGATAATGAAACACCACAACTTTGAACCTCATCAAATATGGAATGTTGACGAATCTGGGTTCAGCACTGTACCATCACAAAACCCTAAAGTCTTTGCAACAAAAGGCAGAAAACAAGTTGGAGTGTTAACCAGCTCAGAAAGATGCCAACATTACACTACGGTATGCTGTGTTAATGCCCTTGGAACTTTCATACCCCCAGCGTTCATTTTCCCGCGTAAAAATATGAAAGCCGAGCTAATGGACCATGCTCCAACTGGCGCAGTTGGGTTTGCCCAAGAAAAGGGATGGATGAATGGAGAGATATTTCTTAAGTGGATGCAGCATTTTGTCAAACATGCAAAGCCGTCGAAAGAAGCCAAGGTTCTACTACTGCTAGATGGACATTCCAGTCATAAAAATTTGGATGTGTTGACTTATGCAAAAGAGAACGGTATTATTATATTCTGCTTTCCACCTCATTGCACACACAAGATGCAACCACTGGACGTCAGTTTCTTTGGACCACTTAACACTTTCTATAATCAAGAGCTACATATTTGGTTGAGGAACCATCCAGGAAGAACTGATACACATTTTCAGGTGGCTGAGCTGTTCAAAAAAGCTTATCTTCGAGCTGCTACAGTCAGCAATGGGCAAAATGGATTCGCCGCAACTGGTATTTTCCCACTGAATGAGAATATTTTCCCTGAGTGCATGTTTGCACCTGCAGACGTCACTGACAATGATCGCAAAGGTTCTTCTGGTCTTGTCCAGCCAGGTAATATCAGAGACGAGAACCTCCATATTCTCACTGAGACACCACCTATAGCGGACCAAAGCTCACAGTCTAAAGAACAAACTGAGGCAGGGCCTTCAGTGCCTTTAAGctctcaaaataattatgagaCTGAAGCAGGGCCTTCAGATTCTACGAGCTCCCAGTCTGACAATCGTACTCAAGGAAATTTAACAATTGCAGATATTTCTCCATTGCCCAAATCCTCACAAATAAAACGATTAGTGAACCGTAAGAAAGGTAAATTCGGAATGCTGAATTCATCTCCAGATGTTGCCCAGCTGAAAGCTATTGTCGCTTTAAAAGAAGCAGCCAATTTAAGAAAATCTGCTCGAAAGatcaaaaaaagaattacaTTGGCAGATTCAAGTGATGAGGAAGAACCGATCGCTTCGGACGATGACGATCCATCCTGCATTTATTGCATGGAGCCTTGGACTCATTCCCGCTCGAGGGAATGGTGGCTTCAATGTCAAATCTGTCGCCAATATGGTGCCATGCAGAGTGCATTGGATTGCCAAAAACGGCAAAACATGTAA
- Protein Sequence
- MKDAISAVRSKRMGWQMAAKAYQVPATTLRRRAEKGETSKGYLGGHKATFTRNLEKEIVDHLQQLEVRFYGMTTTDLRKLAYQIAVAKKLPHRFSSENEMAGIDWLRGFRRRSPSISLRIPEATSATRARGFNRVQVETFFKLLIEIMKHHNFEPHQIWNVDESGFSTVPSQNPKVFATKGRKQVGVLTSSERCQHYTTVCCVNALGTFIPPAFIFPRKNMKAELMDHAPTGAVGFAQEKGWMNGEIFLKWMQHFVKHAKPSKEAKVLLLLDGHSSHKNLDVLTYAKENGIIIFCFPPHCTHKMQPLDVSFFGPLNTFYNQELHIWLRNHPGRTDTHFQVAELFKKAYLRAATVSNGQNGFAATGIFPLNENIFPECMFAPADVTDNDRKGSSGLVQPGNIRDENLHILTETPPIADQSSQSKEQTEAGPSVPLSSQNNYETEAGPSDSTSSQSDNRTQGNLTIADISPLPKSSQIKRLVNRKKGKFGMLNSSPDVAQLKAIVALKEAANLRKSARKIKKRITLADSSDEEEPIASDDDDPSCIYCMEPWTHSRSREWWLQCQICRQYGAMQSALDCQKRQNM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -