Achi012768.1
Basic Information
- Insect
- Antitype chi
- Gene Symbol
- -
- Assembly
- GCA_947359405.1
- Location
- OX375819.1:14776770-14786511[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.048 3.8 8.6 1.3 2 23 792 814 791 814 0.95 2 9 0.068 5.4 8.1 1.2 2 23 852 874 851 874 0.93 3 9 0.0063 0.5 11.4 0.4 2 23 922 944 921 944 0.95 4 9 0.16 13 6.9 0.1 3 21 963 981 962 982 0.95 5 9 0.0031 0.25 12.3 2.2 1 23 991 1013 991 1013 0.96 6 9 0.0055 0.43 11.6 0.3 2 23 1027 1048 1026 1048 0.97 7 9 8.5e-07 6.7e-05 23.6 2.2 2 23 1055 1076 1054 1076 0.97 8 9 0.00014 0.011 16.6 2.7 1 23 1082 1104 1082 1104 0.98 9 9 0.0014 0.11 13.4 0.9 1 21 1110 1130 1110 1131 0.95
Sequence Information
- Coding Sequence
- ATGGAAGGGTTTTGCAGGGGTTGTCTCATAAAATATGACGAACCGATGGACCTGCTACAATATACTGAGAAAATCAGGAGATTATTTGTTTATTCTACAGGATTACAGGTGAAAAGAAATGACAGCTTCATATTCCAGCTATGTAGGGATTGTTTCGTAAACATGAAGCAGGCTTGCAAGTTTAAGAAGAATTGTCGCAATTCAGACAAGCGGTTTAGAAACTATGTAGCTTTAAAAGATGTAGGTGATCCGGTGGATTTCTGCACATTCCTTAAGAATAATGATGATACTTTAACATTCCGTTTTCCAATGACAAGTGGCAACAGTACACCAGCGACCCAAAAATGTAGAGATGATGACAATGAATCAACTTGCACAAGTATCCGTAACTTCATGACGGACATCCTCCAAGGTGAAGAGATGCCTGACACAGAAGCACGCATCATTAAAGAGGTTATAGAAGAAGAGGCTGATTTACTGGATGACTCGCTTGATTCCCACTGGCTGCAGGATGATATGTCGATTGATACAGACTTCAGATTGGATTTTAGTTTCAGTCCATTCTCGACGCCACGCAGTGTTAATAATGATCCCTGTTATACGCCTAAACAAAAAGAGGAGGAAATAACCTTCAACACTATAAACACAGAGAAACAAACAAAAATCCTTAACGATTTTACAAATGCTTTCAAAACTAATGATAATATTGAAGAACTTAGTATTTTTGTTGGGGATGTTAGTGCTGTTGAGAAAACAGAACATTTTAAGAATTTGAAAGAATTATCGCCATTTGGTATAAACGAGATTGATGGTATGGGAAAATCAGAAATTGATACTCTTAAAAATAAACAAAATCTAAAACAGTTAGGTAAACTTGACATAGATGAAATAAATGGTATGGAAACATCTGATAGTCAAATTGTGGAAAGTAATCAAAACTCGGAAGAGTTATGTGATTTTGGTTTAGAAGAAATCGATAGTAATAATGAAACAGAAAACAATACTCTCGAAAGTAATCACAATTTAAAAGAATTATCCAATTTTGGCGCAGACGAATTTGATGGTATTGAATATGCAGAGAGTAATAATGGTGTAAAAAGTAATAACAGTTTGAAAGAAATAATAAGTATTTCGTACATAGAAGAAATTGACAGTAATGGAAAATCGGAGACAGCTGCTGTTAAAACTAATCAGACTCCGAATGAGTTAATAAGTCATTTTGGCTTAGGCACTTTTGGAAAATCAGATCTCAAAAGCAATCGAAATCTTAAAGAATTGTGTAATTTTAGTTTAGGTGGTTTTAATGGTGAAGCAAAAGCAGAAAGCAAAACCCACAAAAAGGTTCAAAGCCTAAAAGAATTATGTGATTTTAGTTTAGACAGTATTGGCAGTTTGGAGAAACCAGCATGCAATATCAACAAAAGTAATGAAAGTCTAAAAGAATTATACAATTTGAGTTTAAATAGTTTTGATGATACAACTAAATCAGGGAGAGGGAGTAATACTTTTAAAACTGATCAAAATGTAAAAGAACTTGATTTGAGTTTATCTGATTTTGATGACATGGCAAACTCGGGAAGTAATATCTTCAAAAATGATTCAAATGTAAAAGAAATGTGTGATTTTGGCATTAAAGGAAATGAGAAATCGGAAAGTAATTTCGATTTACCATCACTGCCTAATGTCTTAGAAAGAGACAAAATGGATACACCAGACTTTGACATACCAAAAGGTGTAATTGGCTACATACCGTCTAGTAACGATGTCAGTAATAGCAGTATCAATATTGAAGCCTTCTTAAAAGATAAACCATGTACAATAGATACAAATTTAGAAGATGCTTTGAAAAATAATGATAGCCAACAATTTTCTTTGGAAGATTTACTTGTTTCACCCCAAGTGTTCTCAGCAGAATCAGCAGCTTCCACGCCTACCATATCAAACATATTATTTGGTGAAAAACATGATACAAAATATGCCAATACTAAAATGGAACAATGCATAGAGTTCCCAGCAGAATCAGCAGCTTCCACACCTTCTTTAACAAACATATTATTTGGTACAACTCATACCAATAGTAACATGGAACCATATCACGATATACAAGAAGATATCGAAATATTTGAAGAATTCTTCCAAAATGATACAAAAGAATTTAACATAGAAGATATTATGAGAGAAAATGGAGGATTTAAATCAGAGGATTGGAAGAAACCTATTGCTGTTAATGATGTGGAAGTTAATAATAAAGAAAATGAGTCAAAGAATATGGATATATTTATTGAAGACACAGATGTAACAGAAACTAAAAACGAAGACCTAATATACATTTCACATGCATCTCCTAATGATAAATTTAATATAGAATATTTATATTGTAAATTGTGTAAAATAAGGTACGATACTAGCAGAGCATTAAGCAGCCATTTAACAAAATTTCATAAAATTAAAATAGAAAAACCCAAAACCCGGAACTGTGACAAAACAAAACCTAAAAATGGAAATCATATCCCAGAAATACCTTCTAATGATAAATTTGATATGAAAAATTTATACTGTAAATTGTGTGAAAGAAAGTACGACACTAGCAGAGCATTAAGCGTACATTTTTCTAAAACTCATAATATTAAAATAGAAAAACCGAAACATACGAAAACTCGGAAATGCGAAAAAAGTGATACACCTGGAACAGAATCTAACAACCAAGTGATTGTAAACATTATGGACACATCTCCAAATGACAAATTTAATATAGAAAAATCATACTGTAAATTGTGTAAGAAGAAGTACAGTGATGGTAGAGCACTAAGCATACATATGTCGATAATTCATAATATTAAAATAGTAAAACCGGGATACGATAGAAAAAACCGAAATGAACAATTATGTAACAATTGTGGAATGGAATGGAAGGATTCCTCAAATTTTGCTAGACATGTGAAAATATGTCAGCAGTCAAAGGGGGGTATTTTCAAATGCGATCAGTGTCTTCAAGAATTTAAGACGAAGTTTTATCTAGAAAAGCATAAGATTGCTCACACAAATGTGAAGAGAAAGAAAACTATGGGAAAGGAAGTTGAATGTACACTTTGCGGCGCCATTTTACGTGGGAAATTTAACTACACGTTGCATATGAGGAGACATACGAAAGACTACATCGTGTACTGCAAATTTTGCGACAAGGGATTCTATAGGCAGTCAGATTTGAAGACACACATGAGGAAACACACTGGCGATACTCCATTTTCGTGTACATTTTGCACGAAGGTGTTCGCTCGTAGAGATGTTCTATTAAGGCACATTCATACACATCTTGGTGAAAAATTCTTCGAATGTGACTACTGTGGTTTGAAATGTATTAAAAAAACCGATTTAATAAACCACATACAGAAAAAATCCTGTAGGAGGGGAAAAAAAGCTAAGAAAAATAAGAAAACAGTCAAACTAGAAAATATGGAGATTGATATAACAGAGAAACAAGAAGATGAAAATGTAGAATTTGACAAAGTAGTAGAAGTTCATAAAGAAGTTAAGAAGACAATAACAGCTAAGAAAAAAAACAAAACGGACAAGAAAGAAAATGTGGTCATTGATATAACAGATGAACAAGAAGTAGAAGTTCAAAAAGAAGTTACGAAGATAATAACAGCTAATAAAAAAATCAAAACGGACAAGAAAGAAAATGTTGTCATTGATATAACAGATGAACAAGAAGAAAAAGTAGAAGTTAAAAAACCAAAAGTTACGGTCATATATGCAAAAGGCAGTGATGCTACGATCAGGAAACAGTTTGCTTTCTTAGAACCTGAAATTACACCACAGGGACTAGAAGAAAAAGTAAAAGTTAAAAAACCAAAAGTGGTCATATATGCAAAAGGCAGTCATGCTAAGATCAGGCAACAGTTATCTTTCTTAGAAACAGAAATAATACCACAGAAACAAGAAAAAGCAGAAGTTCAAAAAGAGGTTAGGACGATAAATGCAGCTAAGATAAAAAACAAAACAGACAAGAAAGAAAATATGTACATTGATCTAACAGAGGAACAAGAAGAAAAAGTAGAAGCGGTCATATATGCAAAAGGCAGTGATGCTAAGATCAGGAAACAGTTACCTTGCTTTGGAACCGAAATTATAACACAGGAGCCAGAAAAAGAAGAAATTACATTCATATATCCAAAAGGCGGTGATGCTAAAATCAGCCAACAGTTACCTTTCCTAGAAACCGACATAAGTAATTAG
- Protein Sequence
- MEGFCRGCLIKYDEPMDLLQYTEKIRRLFVYSTGLQVKRNDSFIFQLCRDCFVNMKQACKFKKNCRNSDKRFRNYVALKDVGDPVDFCTFLKNNDDTLTFRFPMTSGNSTPATQKCRDDDNESTCTSIRNFMTDILQGEEMPDTEARIIKEVIEEEADLLDDSLDSHWLQDDMSIDTDFRLDFSFSPFSTPRSVNNDPCYTPKQKEEEITFNTINTEKQTKILNDFTNAFKTNDNIEELSIFVGDVSAVEKTEHFKNLKELSPFGINEIDGMGKSEIDTLKNKQNLKQLGKLDIDEINGMETSDSQIVESNQNSEELCDFGLEEIDSNNETENNTLESNHNLKELSNFGADEFDGIEYAESNNGVKSNNSLKEIISISYIEEIDSNGKSETAAVKTNQTPNELISHFGLGTFGKSDLKSNRNLKELCNFSLGGFNGEAKAESKTHKKVQSLKELCDFSLDSIGSLEKPACNINKSNESLKELYNLSLNSFDDTTKSGRGSNTFKTDQNVKELDLSLSDFDDMANSGSNIFKNDSNVKEMCDFGIKGNEKSESNFDLPSLPNVLERDKMDTPDFDIPKGVIGYIPSSNDVSNSSINIEAFLKDKPCTIDTNLEDALKNNDSQQFSLEDLLVSPQVFSAESAASTPTISNILFGEKHDTKYANTKMEQCIEFPAESAASTPSLTNILFGTTHTNSNMEPYHDIQEDIEIFEEFFQNDTKEFNIEDIMRENGGFKSEDWKKPIAVNDVEVNNKENESKNMDIFIEDTDVTETKNEDLIYISHASPNDKFNIEYLYCKLCKIRYDTSRALSSHLTKFHKIKIEKPKTRNCDKTKPKNGNHIPEIPSNDKFDMKNLYCKLCERKYDTSRALSVHFSKTHNIKIEKPKHTKTRKCEKSDTPGTESNNQVIVNIMDTSPNDKFNIEKSYCKLCKKKYSDGRALSIHMSIIHNIKIVKPGYDRKNRNEQLCNNCGMEWKDSSNFARHVKICQQSKGGIFKCDQCLQEFKTKFYLEKHKIAHTNVKRKKTMGKEVECTLCGAILRGKFNYTLHMRRHTKDYIVYCKFCDKGFYRQSDLKTHMRKHTGDTPFSCTFCTKVFARRDVLLRHIHTHLGEKFFECDYCGLKCIKKTDLINHIQKKSCRRGKKAKKNKKTVKLENMEIDITEKQEDENVEFDKVVEVHKEVKKTITAKKKNKTDKKENVVIDITDEQEVEVQKEVTKIITANKKIKTDKKENVVIDITDEQEEKVEVKKPKVTVIYAKGSDATIRKQFAFLEPEITPQGLEEKVKVKKPKVVIYAKGSHAKIRQQLSFLETEIIPQKQEKAEVQKEVRTINAAKIKNKTDKKENMYIDLTEEQEEKVEAVIYAKGSDAKIRKQLPCFGTEIITQEPEKEEITFIYPKGGDAKISQQLPFLETDISN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01247525;
- 90% Identity
- -
- 80% Identity
- -