Basic Information

Insect: Antitype chi
Gene Symbol: -
Assembly: GCA_947359405.1
Location: OX375833.1:5951170-5953846[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.7e-05 0.0021 18.8 3.1 1 23 303 325 303 325 0.97

2 11 0.00018 0.014 16.2 0.8 1 23 400 423 400 423 0.97

3 11 0.0035 0.27 12.2 2.9 1 23 427 449 427 449 0.98

4 11 0.29 23 6.2 0.8 2 23 471 493 470 493 0.87

5 11 0.013 1 10.4 2.3 1 23 497 520 497 520 0.97

6 11 0.016 1.3 10.1 0.3 2 23 543 565 542 565 0.93

7 11 9.4e-06 0.00074 20.3 2.9 1 23 575 597 575 598 0.96

8 11 0.0049 0.39 11.7 1.1 2 23 614 635 613 635 0.96

9 11 0.0045 0.36 11.8 0.3 1 23 641 663 641 663 0.96

10 11 0.38 30 5.8 2.6 1 22 669 690 669 693 0.90

11 11 0.027 2.1 9.4 0.0 3 23 752 772 750 772 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.7e-05	0.0021	18.8	3.1	1	23	303	325	303	325	0.97
2	11	0.00018	0.014	16.2	0.8	1	23	400	423	400	423	0.97
3	11	0.0035	0.27	12.2	2.9	1	23	427	449	427	449	0.98
4	11	0.29	23	6.2	0.8	2	23	471	493	470	493	0.87
5	11	0.013	1	10.4	2.3	1	23	497	520	497	520	0.97
6	11	0.016	1.3	10.1	0.3	2	23	543	565	542	565	0.93
7	11	9.4e-06	0.00074	20.3	2.9	1	23	575	597	575	598	0.96
8	11	0.0049	0.39	11.7	1.1	2	23	614	635	613	635	0.96
9	11	0.0045	0.36	11.8	0.3	1	23	641	663	641	663	0.96
10	11	0.38	30	5.8	2.6	1	22	669	690	669	693	0.90
11	11	0.027	2.1	9.4	0.0	3	23	752	772	750	772	0.97

Sequence Information

Coding Sequence: ATGGAATCAACAAGCTACCCCACACCATCAGAGATAGCAGACTTACAAACAGACACAATAATAAAAGAAGAAGATGATATCAACCACCAGGACCATGAAGACATAGCACTTGATATCAAATCAGAAAATATTGATGATATTAGCTCACAAGAACATAATGATGACCCTTTTGGAAATGTACAATTAGAAGTGAAACAGGAAACAATATCCATATGTATAGAAAGAGAAGGTTCCGACTCGCAAAATGAAGATTCTATGTCGAAAATGGATGACTTTAACCACGAAACCAAACATGATTTGGAACATTACGCAACTGTACCTAAATCTGAAATGGATTGTGATGAAAAGTCGCAAGTTAAAGAGGAAAGGGTGTTGGGAGACGAATCTTTGGTGACCTATGATTATCCAAATTTTGATGATGTCGGCAGTATGGATAGCAATGAAGCGGTCGCTTTGAATCAGGTGGAAGCATGTCTGCAGGATGATATGAATATCAAGTGTGAGGATAATGATGATGAGCATCATCATAAAGAAGAATACGACAAAATGAACATCAAAGAAGAAACCGAAGTCACCATTACAGAAACACACTTAATATCAAACAAAGTTATCAACACGACATCCACAATCACTAACCCACACGACGGTCTTATCGAATCTAAAACTACTAAGACTTTAGTCATGGAAATACTTCCAATTCCAATAACTCAAACAAATATGCCATTCTCGAAAATTGGCAATCCAGAGGAAATTCTTCCAACTACATACGATAATGGCGATAGTTATATGGACTACCAAGATTCTTTCCAACTAAATTCTATTACTGGCAATGTTTTATCGCTAGAACAAGAAGCTTACGGCTTACTCAAAGCTAAAGGCAAGAAAAAAGATGTAAGAGAGACCCTCCATACCTGCCCAAAATGCCCCAAAACTTACAGACAAAAGACTTATATGAAAAAGCATTTAGCTGTCCATGATACTATTGAAAAACGCGCACAAGGTCACATTCGAAGCCAGATAACTAAAAAAGAGAATAAAAACAAGAAGTTGAAAGCAGAACTCGAGAGTCAAGCATTTAAAAAAGAAGAAAAAGTTAAGAAGGAAGGCTATGAATGTACTTGTGGGCAATCGTTTCAAAGACGGAGTCGAATGGAGACGTGTTTGAGATCCCACAATCTATTCTGTGACACAAACACTTACCCCTGTATGTCCTGCAATAAACAGTTCAAGGACAAAGAAGAATTAGCCCTCCATCGCAAAAGATTACACAGGAAGAGATTCCCCTGTAAATTCTGTCCCACAGACTATCACACCAGAAAAGAACTTTTCAAACATCTACAAGTCCATCAAAAAGTCCAGTTAATGGAGTACAAAGTCATTTCAGAAGTTGTCAAAGGCAAACAGAAGCTCAAATGCTTCATGTGTCCAAAAAGTTATGTTGAGATATCAGACCTAAAGTGCCATGTCATGGACGATCACAAGGAACCATATAGCTGTCCACGATGCAAGCGAAAGTTTTCAAAAATCATCGACTTCGGAAACCACACAAAAACCTTCCACCCAGAAGTCGAAGGACAATCCGTCTTAGATGTTCTAGAAGCCTTCTCGAGGTTAGTAAAAGCTTGGAAATGTGAGGAATGCGGCCTACAGTTTCATGAAGCAGATAAACTAGCCATGCATCAAATTGAGAAACATAGTCCAGATCTGAAAGCTGAGATGCAGTTTCAGTGCACGGATTGTCGTAGAGTTTTCATCAGTCAGAAAGGACTTACGTCTCATAGACGCATACACCACAATACGGAAACTGTGGAAGAGTCCGAACCTGTGGAACAGGGTGTCATGTGCTTAGAATGTCGAAAGATCTGTAAGGATATGAACGCGTTAATCTCCCATATGCGGTACCATTCGCCAGATAGAAAATACCCCTGCAAATTCTGCGATTTTCGCTTCGCTACACCCGAAAAGCGGAAAGCGCACGCGGAAGTCCATACAGGCGATATGAAATACGTCTGCTTCATTTGTGAGTACCAATGCAGTTCAGAAAATCGACTAAAACAACACAAATTATCGCCTAAACATGTTAATATGAAAGAGTTTTTACTTACTGGAAAGCCGTCGGTTCAAGAAGCGCAATCTTCTTCTAAACAGGAGAAAATAAAAGAGACTTTGAAGAAGAAAGAGTGGCAGGTCAAGGAGAAGAAGAAAAAAGAGAAATCGCGAATTGAGTCGCGTTCGGAGTGTAGTGAAGTGGCTTGTGACATTTGTGGGGATAAGTTCCCAAGTGAGAGTGAGATGTTGGAACACAAACTGACTCACCCTTTCATAGAGTTCCCTAATGAAGATACACCTAGTAGGATATTTTTTAAGTAA
Protein Sequence: MESTSYPTPSEIADLQTDTIIKEEDDINHQDHEDIALDIKSENIDDISSQEHNDDPFGNVQLEVKQETISICIEREGSDSQNEDSMSKMDDFNHETKHDLEHYATVPKSEMDCDEKSQVKEERVLGDESLVTYDYPNFDDVGSMDSNEAVALNQVEACLQDDMNIKCEDNDDEHHHKEEYDKMNIKEETEVTITETHLISNKVINTTSTITNPHDGLIESKTTKTLVMEILPIPITQTNMPFSKIGNPEEILPTTYDNGDSYMDYQDSFQLNSITGNVLSLEQEAYGLLKAKGKKKDVRETLHTCPKCPKTYRQKTYMKKHLAVHDTIEKRAQGHIRSQITKKENKNKKLKAELESQAFKKEEKVKKEGYECTCGQSFQRRSRMETCLRSHNLFCDTNTYPCMSCNKQFKDKEELALHRKRLHRKRFPCKFCPTDYHTRKELFKHLQVHQKVQLMEYKVISEVVKGKQKLKCFMCPKSYVEISDLKCHVMDDHKEPYSCPRCKRKFSKIIDFGNHTKTFHPEVEGQSVLDVLEAFSRLVKAWKCEECGLQFHEADKLAMHQIEKHSPDLKAEMQFQCTDCRRVFISQKGLTSHRRIHHNTETVEESEPVEQGVMCLECRKICKDMNALISHMRYHSPDRKYPCKFCDFRFATPEKRKAHAEVHTGDMKYVCFICEYQCSSENRLKQHKLSPKHVNMKEFLLTGKPSVQEAQSSSKQEKIKETLKKKEWQVKEKKKKEKSRIESRSECSEVACDICGDKFPSESEMLEHKLTHPFIEFPNEDTPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00810484;
90% Identity: iTF_01440450;
80% Identity: -