Basic Information

Insect: Antitype chi
Gene Symbol: su(Hw)
Assembly: GCA_947359405.1
Location: OX375825.1:12615848-12622178[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00079 0.063 14.2 1.3 1 21 53 73 53 74 0.94

2 12 6.4e-06 0.00051 20.8 3.2 1 23 90 113 90 113 0.98

3 12 0.016 1.2 10.1 0.7 2 23 121 143 120 143 0.95

4 12 9.5e-06 0.00075 20.3 1.9 1 20 148 167 148 169 0.95

5 12 4.9e-07 3.9e-05 24.3 0.4 1 23 180 203 180 203 0.97

6 12 0.014 1.1 10.3 3.1 1 23 239 261 239 261 0.98

7 12 0.05 3.9 8.6 0.1 1 23 266 288 266 288 0.96

8 12 1.4e-05 0.0011 19.7 1.0 1 23 294 316 294 316 0.98

9 12 0.00011 0.0089 16.9 0.3 3 23 321 341 320 341 0.98

10 12 0.35 28 5.9 0.1 8 23 359 374 349 374 0.92

11 12 1.9e-05 0.0015 19.3 1.4 1 23 380 402 380 402 0.98

12 12 0.57 45 5.2 0.7 3 23 410 432 409 433 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00079	0.063	14.2	1.3	1	21	53	73	53	74	0.94
2	12	6.4e-06	0.00051	20.8	3.2	1	23	90	113	90	113	0.98
3	12	0.016	1.2	10.1	0.7	2	23	121	143	120	143	0.95
4	12	9.5e-06	0.00075	20.3	1.9	1	20	148	167	148	169	0.95
5	12	4.9e-07	3.9e-05	24.3	0.4	1	23	180	203	180	203	0.97
6	12	0.014	1.1	10.3	3.1	1	23	239	261	239	261	0.98
7	12	0.05	3.9	8.6	0.1	1	23	266	288	266	288	0.96
8	12	1.4e-05	0.0011	19.7	1.0	1	23	294	316	294	316	0.98
9	12	0.00011	0.0089	16.9	0.3	3	23	321	341	320	341	0.98
10	12	0.35	28	5.9	0.1	8	23	359	374	349	374	0.92
11	12	1.9e-05	0.0015	19.3	1.4	1	23	380	402	380	402	0.98
12	12	0.57	45	5.2	0.7	3	23	410	432	409	433	0.81

Sequence Information

Coding Sequence: ATGCCACCCAAACGAAAGAAGTTAGGGCGACCGCCTGGGCCCAAAATTAAGAAGAGGAAAATCAAAACGTCTAACAAAAACCTTGTGGAAAACAATTCTTCTTCAGTTGTAGTACCGAAGAAGGAAAAAGAAACGTCTTCTCAAAGCCATATTGAATACGTCTGTAATGTTTGCAATAAGAATTTCAAAACAGGAAAGGAGTTGTTAATGCATCATAAACGTTGTCGCGCTATAGAATACAATGAAAAGGTTTTCTCGAAGGCTGCATACACTTGTCAAGAATGTCCCAAAAAGTTCAGGTTTAAGAAAAGCTTTACAGAGCATCTCCGGACAGAACACTCCAAGCTACCTGACAGTGTATCTTGTGATCAGTGCAGTGTCCGTTGTCCAGATAAGAAAACTTTGATTGATCACATCAAGAATGTTCATGAGAGGGACATTTTTTCCTGTCCACATTGCAAGCGAACTTTTGTTCGGCGCTCACATGTGCTTCGGCATATGGCGCAGAGTGGATGTGACGGACTAGGAATTGCCTCATATTCTTGCGAAATTTGCAATGCAAAATTTTCCAGAAAGGACAATTTAATGGTCCACATAAGGTTGCAACATATTATAAAGAATGCTTTCTATTGCAAGTGCTGTCTATACTCTACAAAGAACTTTTCTAAATTGGTTAACCATTGGCACAAACAACATGCAGACACCCCAGATCAATATCAGTGTCACCACTGTAGCAAGTGGACCAGCTCTCGAGCCGCCATGACCAAACACCTTGAAATACACGGCGAGAAGAAGTTTGCATGTGATGTGTGCGGCTACAGCACTTTCACGATCGAGGTGATGCGTCGCCACGCGCTCACGCACGTGGAAGACAAGCCATACAAGTGCGCGTTGTGCAGCAAGTCGTACATCCAGCGCGTGCAGCTGCAGCGCCACCTCGAGAAACATACCGGCAACCTGTGCAACAAGTGTGGTGAGACCTTCTCCGGAAGAGCCAGGTTGCTGATTCACATGAGAGAACATATGGGATTAGAGAAGTTATTTTGTCCCCTTACAACTTGTGCATACTCAACAAAAGAATTCATCAGTGAAGCCAGTTTGAATAATCATTTGAAAGTGCATTTAGAAGATAAGCCGTACAGTTGCGAGGTGTGCGCCAAGACGTTCCACTCGGAGGTGAACCTGCGGCGCCACCTAGAGACGCACACGCTGGACCGGCCGCGGCGCTGCATGTACTGCGTGTCGGCGCGCGCCTACGTGCGCGGCGAGCAGCTCATCCGGCACGTGCGCAAGCACCACCCCGCCGTCTTCCAGGGACACCTTCAGCACGTGCGCTCCGTGCTTGGTTCCAATAATTCAATGGAAAGAGTGAAGAAGTCTGAAATAGAATCAATACTGAACCTGTTAGATGTGGAGTCGGATCGTATTCTGCAAGGCTATAGCGGGGCAGGCGTGCTCTACGGCGGCATGCAAGACGACCAGAGCAGTTCCAGTAGCGAAGTCCAGAATAAGAAAGGAAATTTGGCCCTAATGTCAGAGGACGAGCTCACAGAGAATTTGAAAATGTTACTATCACATCTTATTGATGAGGAGACACTCGATTTGTTTGGTTGGCCCGATGAGAGCGTAGACGTGatattagaaaaagtcatcgagcaatgtggtgcaaaacccgcggaccgcgagaaatggacgcgagtgcagcgcctgcgcgaaaactccaagcacttgttcttatacgtgatcgaagacaagaacatagcgcgcatgctcgatacacacactatagatcaaatcgtcaaacacattctcaaacaagtctgcCCAGATGAAACCAAGGAAAGTATCTAG
Protein Sequence: MPPKRKKLGRPPGPKIKKRKIKTSNKNLVENNSSSVVVPKKEKETSSQSHIEYVCNVCNKNFKTGKELLMHHKRCRAIEYNEKVFSKAAYTCQECPKKFRFKKSFTEHLRTEHSKLPDSVSCDQCSVRCPDKKTLIDHIKNVHERDIFSCPHCKRTFVRRSHVLRHMAQSGCDGLGIASYSCEICNAKFSRKDNLMVHIRLQHIIKNAFYCKCCLYSTKNFSKLVNHWHKQHADTPDQYQCHHCSKWTSSRAAMTKHLEIHGEKKFACDVCGYSTFTIEVMRRHALTHVEDKPYKCALCSKSYIQRVQLQRHLEKHTGNLCNKCGETFSGRARLLIHMREHMGLEKLFCPLTTCAYSTKEFISEASLNNHLKVHLEDKPYSCEVCAKTFHSEVNLRRHLETHTLDRPRRCMYCVSARAYVRGEQLIRHVRKHHPAVFQGHLQHVRSVLGSNNSMERVKKSEIESILNLLDVESDRILQGYSGAGVLYGGMQDDQSSSSSEVQNKKGNLALMSEDELTENLKMLLSHLIDEETLDLFGWPDESVDVILEKVIEQCGAKPADREKWTRVQRLRENSKHLFLYVIEDKNIARMLDTHTIDQIVKHILKQVCPDETKESI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01026611;
90% Identity: iTF_01192982;
80% Identity: -