Basic Information

Insect: Antitype chi
Gene Symbol: -
Assembly: GCA_947359405.1
Location: OX375834.1:6306246-6315197[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.9 1.5e+02 3.6 0.1 2 23 32 54 31 54 0.94

2 15 0.0011 0.087 13.8 0.0 1 20 76 95 76 97 0.93

3 15 0.0025 0.2 12.7 4.0 1 23 141 164 141 164 0.94

4 15 0.43 34 5.6 0.0 2 23 237 260 236 260 0.94

5 15 8.8e-06 0.00069 20.4 0.1 3 23 267 288 266 288 0.94

6 15 0.017 1.4 10.0 0.2 1 23 335 358 335 358 0.92

7 15 0.0094 0.74 10.8 0.3 3 23 390 411 388 411 0.94

8 15 0.0061 0.48 11.4 2.3 2 23 434 455 434 456 0.95

9 15 0.00047 0.037 14.9 1.7 1 23 461 484 461 484 0.97

10 15 0.029 2.3 9.3 0.2 1 23 489 512 489 512 0.93

11 15 0.00092 0.073 14.0 0.7 2 23 518 540 517 540 0.93

12 15 0.00064 0.05 14.5 0.2 2 23 548 570 547 570 0.97

13 15 0.099 7.9 7.6 0.0 2 23 577 598 576 598 0.95

14 15 2e-06 0.00016 22.4 0.6 1 23 604 626 604 626 0.92

15 15 2.3e-06 0.00018 22.2 1.2 1 23 632 655 632 655 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.9	1.5e+02	3.6	0.1	2	23	32	54	31	54	0.94
2	15	0.0011	0.087	13.8	0.0	1	20	76	95	76	97	0.93
3	15	0.0025	0.2	12.7	4.0	1	23	141	164	141	164	0.94
4	15	0.43	34	5.6	0.0	2	23	237	260	236	260	0.94
5	15	8.8e-06	0.00069	20.4	0.1	3	23	267	288	266	288	0.94
6	15	0.017	1.4	10.0	0.2	1	23	335	358	335	358	0.92
7	15	0.0094	0.74	10.8	0.3	3	23	390	411	388	411	0.94
8	15	0.0061	0.48	11.4	2.3	2	23	434	455	434	456	0.95
9	15	0.00047	0.037	14.9	1.7	1	23	461	484	461	484	0.97
10	15	0.029	2.3	9.3	0.2	1	23	489	512	489	512	0.93
11	15	0.00092	0.073	14.0	0.7	2	23	518	540	517	540	0.93
12	15	0.00064	0.05	14.5	0.2	2	23	548	570	547	570	0.97
13	15	0.099	7.9	7.6	0.0	2	23	577	598	576	598	0.95
14	15	2e-06	0.00016	22.4	0.6	1	23	604	626	604	626	0.92
15	15	2.3e-06	0.00018	22.2	1.2	1	23	632	655	632	655	0.97

Sequence Information

Coding Sequence: ATGGAACATCCTCACTGCGATATATCCTTTAAGTCTATGAGGTTAAGGAACAGATATGACGGTGTCCAAATCAAAGTTGATACTTCTTCTTTGTCTTGTAGACTGTGCCAAGTCAACTTGGAGGATTTGAACGATTTGATAGATCATCTGAGCAAAGAGCATAAGGTGAAATGCGATTTTTCTGTCGAGACTAATTTGCAGCCGTTCAAACTGATTAAAGACAACTACCCTTGCCCTATTTGCGGAGAAGTTTTCAGATATTTTGGCGTCTTACTCAAGCACGTCGAACTGCCCCAAACTTCTTTTCTAAACGACAACAACATAGAACCTAAGAAAAAACAAAACATACTGCAAATAAGACTGAATATACAATGCGTACTCAACATGTCGACAGCGGTGCCATTCAAATTCTTTTCCAAATATTCCTGCTTTTATTGCTCAAAGAAATTCTCTGAATTTGACGAATTACGCCACCATACTAGTCTTGAACATCCTGTGTGCGATTTGAAGTCCAAGTGCATGAAGAAATGCAAAGGCGAACGGATAGCAGTTAAAATCGATATATCTTCATTAGCTTGTAAAATATGTTGCATCCCTATGCCTAATTTTGAAGATTTAATCAATCATTTAATAAACGAACACAAGGCGAACTATGATACTTCAATTCCCGGGTGTTTGGAGCCTTTCCGGGTTATAAAAGACAACATGCCATGTCCTATATGCCCGGATACAGTCTTTCGATACTTCGGCATTTTGCTCCGACATATGAACTCCGAACATAGTAACAACAACCGAATTTGTGACTTCTGCGGTCGAAGCTTCAGGAACGCGGCGAATCTAAACGTGCATATAACCTACGCACACACAGGTTCAAAATTCAATACTGTGGAGGACAAATATAAGAAAATGGAAGTTGCCCGTAAGCTATTGATAAAACGGCGGAATGTCGAATATGTTTTACAGTATAGCAACGTCACACCTTTCATGTGGCACAAAGGGAAATATAAATGCTTTTACTGCAATGAAACTACTAAAGACCCAGTCGTTCTTCGAGGACATACAATAGAAGCACATCAATTCGCGAATCTAGAACTTGTCGTGTTCGATAGAACCAAAAATAACAGAAATAAAGACGCCGCTGTCAAAATTGACGTCACTAATATATGTTGCAAGCTTTGTCCTCAAGCAGTTACCAATTTAGAAGAGCTGATCCACCACTTGATCATCGCACATGACGCAGAATACGATGTAAGCGTTCCTAATTGTCTGCTACCCTTCAAATTAGATAAGGACCAGCCAACATGCCCGACTTGCAATATGAAATTTGTGTTCTTTGAATATCTGCTGCGCCACGCGAACAAACACCATCTTTCCCACCATTACATCTGTGATGTTTGTGGCACCAGTTTTCAAGGAGAGAACCATTTGAAAATGCATTATAGGTACTATCATAGAGAAGGTGGCTACACTTGCGAATACTGCGGAATCAGTCTTGCTACTCTGTCTAAAAAGATTTTACACGAAAAAAACGTGCATCTAGTCAACTTATCGACATGTCCGCATTGCCCAGAAACATTCAAAAGTCCTTACTTAAAGAAACTTCATTTGGCGAATGTCCATGAAGTAGAAGAACTGAAAATTAAGTGTCCGTTTTGTCCAAAAGTGTATCCACAGGAATCTATAATGTCACGACATATGAGAAGAGTTCACCTGAGAGAGAAGAATGTTGAATGCGATGTCTGTGGTGACAAATTCTTCGGTCCTTACGATGTTAAACTCCACATGGTGAAACATAATGGCGAGAAGAAATTCGTTTGTTCGGTTTGCGGAAAGAAATTCTCTAAACGAAGTAACTTGAACTCCCATGCGGTACTACATACGAAAGAGAAGGATTATGTATGTGTGGTTTGCAATAAGGCGTTTGCGCATCAGACGAATTTGCGAATGCACATCCGGAATAGACACAGTCAGTTTGACCTGGCTCCAATAGTTGACGAGATTGATGAAAGTGAAATGGTGCAAATGGAAATAATCCAGGAGGAGTTAGAGGGGGAGGTGGCAGGACAATACATTCAATGA
Protein Sequence: MEHPHCDISFKSMRLRNRYDGVQIKVDTSSLSCRLCQVNLEDLNDLIDHLSKEHKVKCDFSVETNLQPFKLIKDNYPCPICGEVFRYFGVLLKHVELPQTSFLNDNNIEPKKKQNILQIRLNIQCVLNMSTAVPFKFFSKYSCFYCSKKFSEFDELRHHTSLEHPVCDLKSKCMKKCKGERIAVKIDISSLACKICCIPMPNFEDLINHLINEHKANYDTSIPGCLEPFRVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSKFNTVEDKYKKMEVARKLLIKRRNVEYVLQYSNVTPFMWHKGKYKCFYCNETTKDPVVLRGHTIEAHQFANLELVVFDRTKNNRNKDAAVKIDVTNICCKLCPQAVTNLEELIHHLIIAHDAEYDVSVPNCLLPFKLDKDQPTCPTCNMKFVFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYTCEYCGISLATLSKKILHEKNVHLVNLSTCPHCPETFKSPYLKKLHLANVHEVEELKIKCPFCPKVYPQESIMSRHMRRVHLREKNVECDVCGDKFFGPYDVKLHMVKHNGEKKFVCSVCGKKFSKRSNLNSHAVLHTKEKDYVCVVCNKAFAHQTNLRMHIRNRHSQFDLAPIVDEIDESEMVQMEIIQEELEGEVAGQYIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00823279; iTF_00041982;
90% Identity: -
80% Identity: -