Basic Information

Insect: Antitype chi
Gene Symbol: -
Assembly: GCA_947359405.1
Location: OX375834.1:5632076-5639736[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.15 12 7.1 2.1 1 23 32 55 32 55 0.94

2 21 0.17 13 6.9 0.1 2 23 80 102 79 102 0.94

3 21 0.12 9.6 7.3 0.1 1 23 126 148 126 148 0.93

4 21 0.0002 0.016 16.1 0.2 1 23 152 174 152 174 0.98

5 21 7.5e-05 0.0059 17.4 0.3 1 23 179 202 179 202 0.96

6 21 0.0084 0.66 11.0 0.4 2 23 209 231 209 231 0.93

7 21 0.08 6.3 7.9 6.5 1 23 238 261 238 261 0.96

8 21 0.00047 0.037 14.9 5.3 2 23 268 289 267 289 0.96

9 21 0.0012 0.096 13.6 2.3 1 23 295 317 295 317 0.97

10 21 0.058 4.6 8.3 0.1 1 23 462 485 462 485 0.90

11 21 0.012 0.91 10.6 0.2 2 23 511 532 510 532 0.96

12 21 0.29 23 6.2 2.3 1 23 623 645 623 645 0.98

13 21 0.0076 0.6 11.1 0.3 2 23 673 695 672 695 0.94

14 21 5.3e-05 0.0042 17.9 0.9 3 23 720 740 718 740 0.97

15 21 0.14 11 7.1 0.5 2 23 745 766 745 766 0.95

16 21 2.2e-05 0.0017 19.1 1.8 1 23 771 794 771 794 0.96

17 21 0.84 67 4.7 1.9 2 23 804 826 803 826 0.90

18 21 0.0012 0.092 13.7 1.1 1 23 832 855 832 855 0.97

19 21 0.007 0.56 11.2 3.4 2 23 860 881 859 881 0.96

20 21 8.5e-06 0.00068 20.4 3.9 1 23 887 909 887 909 0.98

21 21 0.00011 0.009 16.9 0.9 1 23 918 941 918 941 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.15	12	7.1	2.1	1	23	32	55	32	55	0.94
2	21	0.17	13	6.9	0.1	2	23	80	102	79	102	0.94
3	21	0.12	9.6	7.3	0.1	1	23	126	148	126	148	0.93
4	21	0.0002	0.016	16.1	0.2	1	23	152	174	152	174	0.98
5	21	7.5e-05	0.0059	17.4	0.3	1	23	179	202	179	202	0.96
6	21	0.0084	0.66	11.0	0.4	2	23	209	231	209	231	0.93
7	21	0.08	6.3	7.9	6.5	1	23	238	261	238	261	0.96
8	21	0.00047	0.037	14.9	5.3	2	23	268	289	267	289	0.96
9	21	0.0012	0.096	13.6	2.3	1	23	295	317	295	317	0.97
10	21	0.058	4.6	8.3	0.1	1	23	462	485	462	485	0.90
11	21	0.012	0.91	10.6	0.2	2	23	511	532	510	532	0.96
12	21	0.29	23	6.2	2.3	1	23	623	645	623	645	0.98
13	21	0.0076	0.6	11.1	0.3	2	23	673	695	672	695	0.94
14	21	5.3e-05	0.0042	17.9	0.9	3	23	720	740	718	740	0.97
15	21	0.14	11	7.1	0.5	2	23	745	766	745	766	0.95
16	21	2.2e-05	0.0017	19.1	1.8	1	23	771	794	771	794	0.96
17	21	0.84	67	4.7	1.9	2	23	804	826	803	826	0.90
18	21	0.0012	0.092	13.7	1.1	1	23	832	855	832	855	0.97
19	21	0.007	0.56	11.2	3.4	2	23	860	881	859	881	0.96
20	21	8.5e-06	0.00068	20.4	3.9	1	23	887	909	887	909	0.98
21	21	0.00011	0.009	16.9	0.9	1	23	918	941	918	941	0.95

Sequence Information

Coding Sequence: ATGAAAGTTAAGAAAACTCCAGATATCAGACAGAATGCTTTAGCTGTGTTTGAATTTTCAACAGTCTACCCATTTGTTTATGGCAGCAATAAGTTCAAATGTTTCATCTGCTCGCAACCGTTTCTGGACTTAAATGAATTGAAGTTACACATGCATTTCTCCCATGCCTTCGCTCCTCTTAAGAGACTTGTTAATAATCGAAGAGAGAATGTCTTAAAAGTAGATGTAAGTGATATAACCTGCAAAATATGTTCAGAAAAACCTGCCAACCTAGTCGAACTCAAACGCCACCTAAAAGAAATACACGAAAAACCAATGGATTTAGAAATCAAAGACAATATGATCCCGTTCAATCTTAAACTCGTCGACGATGAATACAAATGCGTTATATGCGAACAAAGTTTTATAAAAGTGAGAATTTTAGTTATACATATGAGTGAACACTTCAACAATTATAGCTGTGAGGTTTGTGGATCAGTCTTCATGACTTTACGGCTCCTAAAGAAACATTTAGAAGTCCACGACTCTGGAAACTTTCCTTGCGATCGATGCGATAAAGTTTTTAGCACTCCTTATAAACGGACTTTGCATATACGAGGCGTGCATTTGAAGCAGTGTCCGAGAAGATGCCCGATGTGTCCAGAAAAGTTCAATTCAAATTATAAAAGGACTATTCACTTACAAGATGTCCATAATCAAGAAACTAGAGTACATAAATGCAAGACGTGTGGCCGAGGATTCAATCTGAAGTATCATTTAGTCTGTCATGTGCGTTCTGTACATCTTCAGGAGCGGAATCAGCAGTGCGATGTGTGTCACCAAAGGTTTTGCAATAAGGAGTCTTTGAAGCGGCACAGAGTTATACATACAGGGGAAAAGAATCATAAGTGTGATGTATGTGGGATGGCGTTCCTGAGACGGAAGAATTTGAAGGACCATTTTCGTTTGCATGATATTAGTATCATCCAGAAATCAAATTCAACAATCACTCTGAAAGACGAAGATGGCACAGAAATCAAACTGACAGTACTCAAATATCCAATTTCTTTAAAAACTCTAGAATATGAAGCTCAAGATATTACCGCCAACATTAAAAATAAACAAAAAAAGAAAATTGGCAAAACGAAGGATGCTAATAAGAGCAACGTCAAGTTAGAAAACGTAGCTTTGTTGAAAGAACCAGTATCTGTAAATAACGTTGATTGGGAAAACCAAAATGAGCAAAAAAATTCGGTTACATTCAATGTGAAGACTGTAAAAGGTTATATCCGTGCACCAACGAGACCACGAAACGAAAACACTGACTATGAAACCTGGAAACAGAATGCCTTAATCATCTTTGAAAACTCTTATGTCTATCCATTTATACATGCGGGTAATAAATACAAGTGCGTCATCTGCTCCAAGCCCTTTCTAGATGCTAATCTATTGAAAGACCATTCAATAAACGAACATACAGCCAAAGAAATGAAACGAGCATTAAATAATAGAGTTAGAGACAAAAATCTTAAAGTCGACGTCTCCTATCTCCAGTGCAAGATCTGTTTGCAATCACTACCTGATCTGCAGAACTTGAAGATGCATTTACAGGAGCATGGCAAGAACATACAGCTGGATTTGCAAGATAATATAATACCTTACAAGCTAGGAGGCGAGAATTTTGAATTCTCTATTGGTGAACAAACAAAGGATCGAAGAATCAAAGAGAAAAATAAATATGAACATTTTGTCTCCCCAGGAACCGAAGTGAAGCGACGACAAGGAGCACTGACCAGTATCTGGGAACTGACACTTTCTGAACGACAGAACGCCTCGATGCTTTTAGAAAACACCACAGCAACACCTTTCGTGTACTGCAGATATTATTTCAAATGCTTCTTCTGCAGAGAACAGTATTCGGAGATAAAAACACTTCTACAACATACGCTGACACATGAGACACCAGATAATGCTACCATCCTCAAAGAATATCTCGCGAAAGGGAAACGTACTGTTAAAGTAGACATTTCAGATTTAAAATGCAGAGTATGTGATCAAAATTATAAGGACCTCGATGAAATACGAAAGCATTTGACCATAGACCATAAAATGTCTTTCACGGAATCAGGAAATGGACTGGTAGCTTACGATCTATCTTCTAAAAATGGCCAAATCGCCTGCCACATATGCAACAAGATCTTCCAGACATTTATACTTCTAAACAGGCATATGAATGTACATTTCAATAATGCGGTTTGTGAAACTTGTGGGGCTGGTTTTATGACTCATCAGCGGTTGATACAGCACAAAGAAATCCACCTGCCAGGAGGGTATCCTTGCAAAAGATGTACCAAAGTATACACAACGAATTCTAACTTAAAATATCATACAGAAAAAGCTCACGAAGGAACGACGAAGATGAGAATGTTAAGATGTCCACGTTGTCCCGAAAGATTCACTGAACACTTTCGGAAATTGAAGCATTTGAAAGAAGCACACGGGATTACCTTTACATTTGAATGTGATGTATGTCATTCGGTGTTCCCAAGCCGCAGAGCATTGACAATGCACACAAATAAGTTGCATACGGTGAAAACTCAGTGCGAAGTTTGCAAAAAGAGTTTTAGCTGTATTACTTCTCTAAAGAAACACATGGTTTCTCACACAGGAGAAAGGAATTTCATTTGTTCTCTTTGTCAGAAAGCTTACAGACATCAGAAGAGTTTGAAGCTGCATATGAGGACGCATCTTCAGGGAGAACAATATATTAAATTCAATTGCTCGGTTTGTGGGCACGGGTTCCCCAATAGGAACGACTACAATAGACACATAAAGGAATGGCACCCAAGGACTCTTTTCGATTATTCTGGTCATTAA
Protein Sequence: MKVKKTPDIRQNALAVFEFSTVYPFVYGSNKFKCFICSQPFLDLNELKLHMHFSHAFAPLKRLVNNRRENVLKVDVSDITCKICSEKPANLVELKRHLKEIHEKPMDLEIKDNMIPFNLKLVDDEYKCVICEQSFIKVRILVIHMSEHFNNYSCEVCGSVFMTLRLLKKHLEVHDSGNFPCDRCDKVFSTPYKRTLHIRGVHLKQCPRRCPMCPEKFNSNYKRTIHLQDVHNQETRVHKCKTCGRGFNLKYHLVCHVRSVHLQERNQQCDVCHQRFCNKESLKRHRVIHTGEKNHKCDVCGMAFLRRKNLKDHFRLHDISIIQKSNSTITLKDEDGTEIKLTVLKYPISLKTLEYEAQDITANIKNKQKKKIGKTKDANKSNVKLENVALLKEPVSVNNVDWENQNEQKNSVTFNVKTVKGYIRAPTRPRNENTDYETWKQNALIIFENSYVYPFIHAGNKYKCVICSKPFLDANLLKDHSINEHTAKEMKRALNNRVRDKNLKVDVSYLQCKICLQSLPDLQNLKMHLQEHGKNIQLDLQDNIIPYKLGGENFEFSIGEQTKDRRIKEKNKYEHFVSPGTEVKRRQGALTSIWELTLSERQNASMLLENTTATPFVYCRYYFKCFFCREQYSEIKTLLQHTLTHETPDNATILKEYLAKGKRTVKVDISDLKCRVCDQNYKDLDEIRKHLTIDHKMSFTESGNGLVAYDLSSKNGQIACHICNKIFQTFILLNRHMNVHFNNAVCETCGAGFMTHQRLIQHKEIHLPGGYPCKRCTKVYTTNSNLKYHTEKAHEGTTKMRMLRCPRCPERFTEHFRKLKHLKEAHGITFTFECDVCHSVFPSRRALTMHTNKLHTVKTQCEVCKKSFSCITSLKKHMVSHTGERNFICSLCQKAYRHQKSLKLHMRTHLQGEQYIKFNCSVCGHGFPNRNDYNRHIKEWHPRTLFDYSGH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -