Basic Information

Insect: Anticlea derivata
Gene Symbol: stc
Assembly: GCA_947579855.1
Location: OX388268.1:2455515-2475862[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2e+04 -4.4 1.6 15 19 597 601 596 601 0.81

2 13 0.12 1.2e+03 -0.2 0.6 4 10 630 636 628 636 0.91

3 13 4.1e-05 0.4 10.9 18.1 4 19 644 659 642 659 0.93

4 13 3.1e-05 0.31 11.2 10.9 1 18 695 712 689 713 0.89

5 13 0.00023 2.3 8.5 9.8 1 18 754 771 754 772 0.98

6 13 9.4e-07 0.0093 16.1 10.0 1 19 813 835 813 835 0.88

7 13 2 2e+04 -5.4 2.2 6 10 865 869 865 869 0.94

8 13 0.017 1.6e+02 2.5 7.3 1 11 875 885 875 886 0.93

9 13 0.38 3.7e+03 -1.8 2.4 4 10 890 896 889 896 0.92

10 13 8.1e-09 7.9e-05 22.7 15.8 1 19 902 920 902 920 0.99

11 13 0.062 6.1e+02 0.7 17.3 1 18 959 975 959 976 0.81

12 13 4.4e-08 0.00043 20.4 14.9 1 17 1012 1028 1012 1036 0.89

13 13 0.0063 62 3.9 5.1 1 12 1042 1052 1042 1052 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2e+04	-4.4	1.6	15	19	597	601	596	601	0.81
2	13	0.12	1.2e+03	-0.2	0.6	4	10	630	636	628	636	0.91
3	13	4.1e-05	0.4	10.9	18.1	4	19	644	659	642	659	0.93
4	13	3.1e-05	0.31	11.2	10.9	1	18	695	712	689	713	0.89
5	13	0.00023	2.3	8.5	9.8	1	18	754	771	754	772	0.98
6	13	9.4e-07	0.0093	16.1	10.0	1	19	813	835	813	835	0.88
7	13	2	2e+04	-5.4	2.2	6	10	865	869	865	869	0.94
8	13	0.017	1.6e+02	2.5	7.3	1	11	875	885	875	886	0.93
9	13	0.38	3.7e+03	-1.8	2.4	4	10	890	896	889	896	0.92
10	13	8.1e-09	7.9e-05	22.7	15.8	1	19	902	920	902	920	0.99
11	13	0.062	6.1e+02	0.7	17.3	1	18	959	975	959	976	0.81
12	13	4.4e-08	0.00043	20.4	14.9	1	17	1012	1028	1012	1036	0.89
13	13	0.0063	62	3.9	5.1	1	12	1042	1052	1042	1052	0.96

Sequence Information

Coding Sequence: ATGTCACATTGGAACAATTCATACGCTTACAACAACCAGTACCAACAAAACCCTAATGGCTGGAATGGTGATCCCAATGGCCAATATATGAATCAAGCTTATTACACAAGGCCAGATGCCAATGGTCAATATGTGAGTTTCAATGAGTTCCTTACGCGAATGCAAAACAGTAATGTAGCTCCACAGGCCAATCCCAATACCTTCAACAATGTACCATTTGAGAATTATCCCTCAGGTCAGTATAACTATCAAAATACAACATCATCTCAACCACAGCCTAACAATTACAACTATGGGCCTTCAAGCTTATCTAATGAAGCTAATACCTTCCCATTGAACCCACAGGGCCAGTTCAGTGCCCAAACAGCAGAACCAACAACATACACAAATAATATGGCCTTCAAATCCAACCTTACCGCAACTGCTATTGAATTTGTACCAAAAGGTACTGGTAAAGGTACTACTGCTCCTCAACCTTCCACCAGCAGTCAGGGCATTCCAGAATGTAGCAATAATGATGTTAACGAAAGCACAAATGAGGCACAGACTAACCAAGGTAGCTCTTCGCATCGTAACTGGCGAGAAAGGTCACAGGGCTCTCAACAAAACAGTGATGTGAAAGATAAACCAGTGCCTAATGGACAGCTCCAAGATATCAAGAAAAGCTATGAACGTAATGGTCGGAATCGTGATGCTGCCCAACGTAACAATGAAGCCAATGGAAGACATGAAAATAAGTTCCAAGAATATAGTAATGATGGAGAACCAAACACTCGTAGCAATAATTCTAATAGAAATCAAAATTTAACCAGTAAGAGTCGAGATACAAGTCAACAGTCTGAGTCAAGTAGTATGAACCGAGAACCACGTCAACGGAATTATGATTCAAACAATAGAAATCAAGAATCTCGGTCAAATAATAGGAATCAAGAAACACGTCAATATGATAGAAACCAAGAAACAAGGCAAAGAAACTATGAAGGAAACACGGAATCTCGACAGAAAAACTATGATTCCAACTCTAGAAACCGAGATCGTCAAAATTATGACTCAACTGACCGAGGTCAAGAATCAAGGGAATATGATTCTAATCAGCGCTACGACTCCCGGAATGACCGCCGAAACCAAAATAAGGGTAGCCTCAATGCTAAAGGAAAAGATGACAATAGAACTTTTTACAATAGTGCTATTAGCAAAGATAGCCAAGATGTTAGAAGTGGGCGGGGGGAAAACTCTAGAGAAGGGTACACAAGAGCCGAAAATTCTAGGGGAGAAGGTTCTAGAGGGGACAGTTATGCAAGAAATGATGGTCCTAGGGAAGCCTCCGGAAGGGGACAAAGAAACTGGGCTGGTACCCAACGTCCCCGAGGAGACCGTAACCAAGATGATGAGCAATTTGCAAATAGTTACCAGAAGGAAGATAGAATGGACCGAGATAGACCAGAAAGAATAGACAGAGATAGAGGATATGATAGGGGAGAAAGAGACCGAGGGTATGATAGAGAAAGAGGATATGACAGACAAGATAGAGAAAGAGCTTCTAAATCTAATCTCCCTAGTCCAGCGAGATTTAAAAGCAAACATCAGACTGATCTAGCTAACAAAGAGATGACACAGCGAGAGCGTCTCACAGACCAATTAGACAAAGGCACACTAGAGTGCCTCGTGTGCTGTGATCGAGTGAGACAGACTGATCCGGTGTGGTCCTGCTCTAACTGTTACCATGTGCTACATCTGAGGTGTATTAGAAAGTGGGCCATGAGTAGTATAATTGAGTGCAAATGGCGGTGTCCAGCCTGCCAGAACATCAGCAAAACCATCCCGACGGAGTACCGCTGCATGTGCGGCGCGATCCGCTCGCCGGACTACCAGCGCGGCAGCAGCGCCCACACCTGCGGCAAGGCCTGCAAGCGCGAGCGGACCTGCCCGCACCCCTGCACCCTGCTGTGCCACCCCGGCCCCTGCCCCCCGTGCCAGGCCACTGTCACCAAGCAATGCGGGTGCGGCGCGGAAACCCGCAGTGTCATGTGCAGCAGCAAGCTGCCCCAGGTGTGCGGGCGCGCGTGCGGCCGCACGCTCTCTTGCAACGTGCACGCGTGCGAGAACGACTGCCACGAGGGAGACTGCGCCGAATGCGACAAGACTGTCACGCAAGTATGCTACTGCCCCGCGGCCACTGAGCGCAGTATTCCGTGCACACGTGAGTCCGGCTCGAACGCGCACTGGGAGTGCGGGAGCGCCTGCGGACGTATTCAGGCGTGCGGCGCTCACGTGTGCCGCGCGCCGTGTCACGCGCCGCCGTGCGCCGCCTGCGCGCTGCTGCCCGACACCATACTCACCTGCCCCTGTGGGAAGATGCAGTTAGACAAGAAGGCACGCAAAGCATGCACCGACCCAATTCCTCTGTGTGGCAACATCTGCGCTAAGCCTCTTTCCTGTGGACCCGCTGGAGACAAACATTTCTGCAAACTCGTCTGCCACGAAGGTGCCTGTCCCGTTTGCCCGGACAAAACCCTGCTACAGTGCCGCTGCGGGCACTCGAGCCGCGAAGTGCCATGCGCCGACCTGCCTGAGATGCTCAACAATGTCCTCTGCCAGAAGAAATGCAATAAGAAATTGTCGTGCGGTCGTCACCGCTGCCGCACCGCGTGCTGCGCCGCGGCCACTCACCGCTGCACCGTGACGTGCGCGCGCTCGCTGCCGTGCGGCTTGCATCGCTGCGAGGAGTTCTGTCACACGGGACACTGCCCGCCTTGTCCCCGCGTCAGCTTCGAGGAGCTGCGCTGCTCGTGCGGCGCGGCGGTGCTGCTGCCGCCGGTGGCGTGCGGGCAGCGCGCGCCGGCGTGCGAGGCGGCGTGCGGGCGCGCGCGCGCCTGCGGGCACCCCCCGCACCACTCGTGCCACACCGGCGACTGCCCGCCCTGCGTCGTGCTCACCGCCAAGCGCTGCTACGGCAACCACGAGGAGCGGAAAACCATCCCGTGTTCATTAGAGGAGTTCTCGTGCGGCCTACCGTGCGGAAAACCGCTGCCTTGCGGGAAGCACACGTGCATCAAAACCTGCCACAAGGGACCGTGTGACCCTGGGAAATGCACCCAGCCGTGCACGGAGAAGCGGCCCGCGTGCGGTCACGTGTGCAACGCCGCGTGCCACTCATCCGCCGCGGCCGGCAGCCTCGCCGCCGCCTGCCCCAGCGCCGCGCCCTGCCGCCAGCCCGTGCGCGCCACCTGCCCCTGCGGCCGGCGCCGCGCCGACCGCGCCTGCAGCGACAACGCGCGCGACTACGCCAAAATGATGAGTGCCTTAGCTGCAACGAAAATGCAAGAAGGTGGTGCCTTCGAGATCACTGAACAACGCCCCGGAAATATGCTGAAAACTCTGGAATGCGACGACGAGTGCAGAGTGGAAGCCCGCACTAGACAAATGGCGCTGGCGCTACAAATCCGCAACCCGGACGTTTCCGCTAAACTAGCGCCGCGGTACAGCGAGCACGTTCGCACCACGGCCACCAGGGAACCGGCATTCGCTCAGCAAATACACGACAAGCTTACTGAGCTCGTTCAACTGGCCAAGAAGTCGAAACAAAGGACTCGCGCGCACTCCTTCCCTTCAATGAACTGGCAGAAGCGTCAGTTCATTCACGAGCTGTGCGAACATTTTGGCTGTGAAAGTGTCGCCTACGACGCTGAGCCCAACAGGAACGTTGTAGCTACCGCTGATAAGGAGAAGTCGTGGCTGCCAGCGATGAGCGTACTGGAAGTGCTGGGTCGCGAGACAGGCAAGAGGAGAGTGCCCGGACCGGTGCTGAGGGCGCCTCCGTCTGCCGCCGGCGCCTCCAACGCTGCCAGTAACACTAAATCTACAAGCGGCTGGGCCACACTAACATCAAAGACAACGAACGCGTGGGGCGCACGCAGCCAAAGTCAAGCCACGCCGGCGCCGGCGCCGCCCGAAGCTAAGATAGACTACTTCGACAACCCGCCGGACAACTAG
Protein Sequence: MSHWNNSYAYNNQYQQNPNGWNGDPNGQYMNQAYYTRPDANGQYVSFNEFLTRMQNSNVAPQANPNTFNNVPFENYPSGQYNYQNTTSSQPQPNNYNYGPSSLSNEANTFPLNPQGQFSAQTAEPTTYTNNMAFKSNLTATAIEFVPKGTGKGTTAPQPSTSSQGIPECSNNDVNESTNEAQTNQGSSSHRNWRERSQGSQQNSDVKDKPVPNGQLQDIKKSYERNGRNRDAAQRNNEANGRHENKFQEYSNDGEPNTRSNNSNRNQNLTSKSRDTSQQSESSSMNREPRQRNYDSNNRNQESRSNNRNQETRQYDRNQETRQRNYEGNTESRQKNYDSNSRNRDRQNYDSTDRGQESREYDSNQRYDSRNDRRNQNKGSLNAKGKDDNRTFYNSAISKDSQDVRSGRGENSREGYTRAENSRGEGSRGDSYARNDGPREASGRGQRNWAGTQRPRGDRNQDDEQFANSYQKEDRMDRDRPERIDRDRGYDRGERDRGYDRERGYDRQDRERASKSNLPSPARFKSKHQTDLANKEMTQRERLTDQLDKGTLECLVCCDRVRQTDPVWSCSNCYHVLHLRCIRKWAMSSIIECKWRCPACQNISKTIPTEYRCMCGAIRSPDYQRGSSAHTCGKACKRERTCPHPCTLLCHPGPCPPCQATVTKQCGCGAETRSVMCSSKLPQVCGRACGRTLSCNVHACENDCHEGDCAECDKTVTQVCYCPAATERSIPCTRESGSNAHWECGSACGRIQACGAHVCRAPCHAPPCAACALLPDTILTCPCGKMQLDKKARKACTDPIPLCGNICAKPLSCGPAGDKHFCKLVCHEGACPVCPDKTLLQCRCGHSSREVPCADLPEMLNNVLCQKKCNKKLSCGRHRCRTACCAAATHRCTVTCARSLPCGLHRCEEFCHTGHCPPCPRVSFEELRCSCGAAVLLPPVACGQRAPACEAACGRARACGHPPHHSCHTGDCPPCVVLTAKRCYGNHEERKTIPCSLEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDPGKCTQPCTEKRPACGHVCNAACHSSAAAGSLAAACPSAAPCRQPVRATCPCGRRRADRACSDNARDYAKMMSALAATKMQEGGAFEITEQRPGNMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSEHVRTTATREPAFAQQIHDKLTELVQLAKKSKQRTRAHSFPSMNWQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLGRETGKRRVPGPVLRAPPSAAGASNAASNTKSTSGWATLTSKTTNAWGARSQSQATPAPAPPEAKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00362225;
90% Identity: -
80% Identity: -