Ader000441.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anticlea derivata
Gene Symbol
nfxl1
Assembly
GCA_947579855.1
Location
OX388280.1:7941431-7943899[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 2 2e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 18 0.014 1.4e+02 2.7 0.7 4 10 169 175 168 175 0.97
3 18 3.1e-07 0.003 17.7 15.9 3 19 186 202 185 202 0.95
4 18 5.9e-08 0.00058 20.0 13.6 3 19 239 255 237 255 0.91
5 18 1.1 1.1e+04 -3.2 0.9 6 10 280 284 279 284 0.86
6 18 6.7e-10 6.5e-06 26.2 11.8 1 19 290 308 290 308 0.99
7 18 1.6e-06 0.016 15.4 18.3 3 19 345 361 344 361 0.93
8 18 5.9e-06 0.058 13.6 18.3 1 18 395 412 395 413 0.97
9 18 1.3e-09 1.3e-05 25.2 14.5 1 19 422 440 422 440 0.99
10 18 0.0002 2 8.6 6.4 9 19 488 498 486 498 0.89
11 18 0.028 2.8e+02 1.8 8.1 3 12 509 518 508 518 0.91
12 18 0.35 3.4e+03 -1.7 3.3 14 18 547 551 547 552 0.85
13 18 0.23 2.3e+03 -1.1 0.4 8 12 568 572 567 579 0.79
14 18 1.9e-05 0.19 11.9 5.1 1 11 588 598 588 599 0.97
15 18 2 2e+04 -6.1 5.7 14 18 612 616 610 617 0.85
16 18 3.5e-05 0.34 11.1 13.7 1 18 628 645 628 646 0.88
17 18 2 2e+04 -6.5 3.4 9 13 652 656 652 656 0.71
18 18 9e-07 0.0088 16.2 12.6 1 18 687 705 687 706 0.89

Sequence Information

Coding Sequence
ATGGCGCGCCGCTACAGAGACGCTGCCGCGAAACTGCAGCAAAATGTACAGAAACATCTCAAGGATATGAAAGACTTATCTTCCTCTGAGGATGAAGAACCCTACGAGTCCAGCGTCATCGAGGGGATGTTCCAGAGCTATTGGCGGGGCGGTGGGGATACCCAGATGCTGAATAGAACAAAGAATCTGCTAGAAGAGGCCATCAGCGGCCGTTCCGTAGCTTGCCTGATTTGCATCAGTTCTATAAAACGGAACCATGCTGTCTGGACGTGTGATCACTGCTACTCGTACTTCCACCTCTCTTGCATTCAAAAATGGGGTAACGACAGCATCAGTTTGCGCAGTATCGAGCCCCAAGCGCCGATTAGCGTTTACAAGCCGCAAAAAATAGAATGGTGCTGCCCCAAATGCCGCAACTCCTATAGCAAGGACGAAATACCGAGGAAATACAGATGTTTTTGTAGCAAAACCGATAATCCTCCGGTTCACCCATGGCTAATACCCCACACCTGTGGAGAAGTGTGCGAGAAGAGGCTATCGACTGGTGATAACTGTAAGCACAAGTGCCTGCTCCTGTGTCACCCAGGGCCATGCCCTCCTTGTCCACAAACAGTGAACGGGATATGCTACTGTGAAAAAGAACGTAAGAGAGTCAGATGCAGTGCAGCAAAATGGTCGTGTGGCCAGCAATGTAGGAAAACTTTGCTGTGCCAGACACACAAGTGTGAGCTCTTATGCCACGAGGGAGAGTGTCCACCGTGCACCTACACCAGCATCCAGCCTTGCCAGTGTGGAGCTGAGAAGACCAAAAGGCCCTGTGATGACCCCTTCTGGCACTGCAAAAAGCCTTGTAACAAACCATTTTCATGCGGCTACCACAAATGTGAGAAAATATGCCATTCAGGAGACTGTGAGGAATGCCCTAACTCTGGCATGAGGTCTTGTCCCTGTGGAGCTAATCAGCGCTATGTCCAGTGTCCTGACATCATGGAAACATGTCTTGGAACCTGCAGCAAGAAGCACAATGATTGTGAACACAGTTGCCCTGAGAAATGTCATAAAGGACCCTGCCCTCCTTGCCAAGTTCTAATCCAAAAGAAATGTCAATGCTCGACTCACACCAGATCCCTACCTTGCAGTAAGGAGTTTAAATGCGACACAAAATGCAGAGGAACCAGACCATGTGGCAAACACGGTTGTGCAAGGAAATGTTGCAATGGAAACTGTCCTCCGTGTGAAAAAGCCTGTGATAAGCCATTACAATGTGGCCGTCATAAATGCACTACTGTCTGCCACAATGGACCATGCTATCCATGCCCACTGGAATCTAAAGTCACCTGTAAATGTAAGGAGACCTACGTAACCATCCCATGTGGAAGAGAAAGGTTCACCAAACCACCAAAATGTCACCTCCCCTGCAAGGTGAAGTACAAATGTGGTCATGTGGAGGAAAATAAGCATTCCTGCCATTTTGGAGACTGTCCACCGTGCAAAGCTATCTGCTTCAAAACTTACCCAAACTGTAGGCATGAATGCAAGGCAACATGTCATGAGTTCAAAGCTGTGGTCTTCAAACAGATCGAGAAACCGGCTACACCCTGGGAAGTTCAGCCTCCAAAGACAAAGATTATGACGTTAGAATGCCCTCCATGTAACACACCTGTCACTGTCATATGTTTCGGGGAGCATGAGACAGATAGCCAGCCCTGTCACACGGCAGCCCGCAGGCCTTGCGGCAGAGAATGTGGGAAACCCCTTGCTTGCGGAAACCATAACTGTACTCTTCTCTGTCATCTATACAGCCCTGACCCTGACTATCAACATGTGCCCTGTAACTGCAAGCCATGTAATAGAGAGTGCCTGAAACAGCGTCCAGAAAAATGTTCCCATAAATGTTCTATACGATCTTGCCATCCCGGCAATTGCCCTCCTTGCGAGGTATTAGAACGAATTCCATGCCACTGTGGCATCACTGAGCTCTACCTCCGCTGTAGAGAGTATTGTTCCGCAACAGAAGAAATGCTATCATGCAAACAGCAATGCCCAAAGAACTTAGAATGCGGGCATCGATGTAAAAATACTTGCCACTCTGGTAACTGTGGTAACCAAGTCTGCACCAAGAAAACTAAGATACACTGCCCTTGTGGCAACTTGAAGAGAGATGCCCCCTGTAATGTAGTCAAAGCCGGTGAGGCTAAGGTTGAGTGTGACAAAACCTGTGAAGTCAAAAAAGTAGCTGTTAAAATAGAGAATGAAAGAGAACAGCAGAGATTAAAGCAGTTAGAAGAGGAAAGAAATAAGAAGGAACTGGCTGAGTACGAGTGGAAACTCAGCGGGAAAAAGAAGAAGTATAAAGAAAAGAAGGTTGTGATCAATAAAGATGAAAGGAACTGGATACATCGACACTGGTTGCCGATTCTGGCAGCGCTTATAGCATTACTAGCGATAGCTTGTTTTTATTATTTGTAG
Protein Sequence
MARRYRDAAAKLQQNVQKHLKDMKDLSSSEDEEPYESSVIEGMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVACLICISSIKRNHAVWTCDHCYSYFHLSCIQKWGNDSISLRSIEPQAPISVYKPQKIEWCCPKCRNSYSKDEIPRKYRCFCSKTDNPPVHPWLIPHTCGEVCEKRLSTGDNCKHKCLLLCHPGPCPPCPQTVNGICYCEKERKRVRCSAAKWSCGQQCRKTLLCQTHKCELLCHEGECPPCTYTSIQPCQCGAEKTKRPCDDPFWHCKKPCNKPFSCGYHKCEKICHSGDCEECPNSGMRSCPCGANQRYVQCPDIMETCLGTCSKKHNDCEHSCPEKCHKGPCPPCQVLIQKKCQCSTHTRSLPCSKEFKCDTKCRGTRPCGKHGCARKCCNGNCPPCEKACDKPLQCGRHKCTTVCHNGPCYPCPLESKVTCKCKETYVTIPCGRERFTKPPKCHLPCKVKYKCGHVEENKHSCHFGDCPPCKAICFKTYPNCRHECKATCHEFKAVVFKQIEKPATPWEVQPPKTKIMTLECPPCNTPVTVICFGEHETDSQPCHTAARRPCGRECGKPLACGNHNCTLLCHLYSPDPDYQHVPCNCKPCNRECLKQRPEKCSHKCSIRSCHPGNCPPCEVLERIPCHCGITELYLRCREYCSATEEMLSCKQQCPKNLECGHRCKNTCHSGNCGNQVCTKKTKIHCPCGNLKRDAPCNVVKAGEAKVECDKTCEVKKVAVKIENEREQQRLKQLEEERNKKELAEYEWKLSGKKKKYKEKKVVINKDERNWIHRHWLPILAALIALLAIACFYYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857272;
90% Identity
iTF_00362224;
80% Identity
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