Ader010634.1
Basic Information
- Insect
- Anticlea derivata
- Gene Symbol
- GATA-B
- Assembly
- GCA_947579855.1
- Location
- OX388261.1:123487-125522[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-18 7.7e-15 54.3 3.9 1 34 11 43 11 45 0.97 2 2 1.8e-18 3.6e-15 55.4 6.3 1 34 79 111 79 113 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGTGGGGCGCGAGTGCGTGAACTGCGGAGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGCCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCAGCGCATCGCACGCGCCGCTCGCGCCGCACGACATGGGCACCAAGCGGCCCGGCATGGCCTGCACCAACTGCCACACCACCACCACCTCGCTGTGGCGCCGCAACGTGAAGGGCGAGACGGTGTGCAACGCGTGCGGCCTCTACTTCAAGTTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTGCATCCAGACGAGAAAGCGGAAACCCAAAAACAGCAGCATGAAGGCGGACCGAAGCCTCAAGAGCACAATCTCACGCGCCGTGTCGTCGGGGAGCGTCAAGATGGAGAACTTACTGGAGAGCGGCGCGCCGCGCTCGCCGCTGTCGCTCGGCTACTACGTGCAGCACGCGCTGAAGCTGGAGGAGCCGCCGCACGCACACATGCAGGCGCAGCACGCGCACGCGCACGCACACATGCACCCGCTCTACGAGGAGCTGGAGTACCGGCGCGAGCCGCCCGCCGCCGCCGCCGTCTCGCTCGCCAGCTGA
- Protein Sequence
- MAEFFTVGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRSASHAPLAPHDMGTKRPGMACTNCHTTTTSLWRRNVKGETVCNACGLYFKLHNINRPLAMKKDCIQTRKRKPKNSSMKADRSLKSTISRAVSSGSVKMENLLESGAPRSPLSLGYYVQHALKLEEPPHAHMQAQHAHAHAHMHPLYEELEYRREPPAAAAVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01336474; iTF_00662753; iTF_00661900; iTF_00639193; iTF_00267790; iTF_00663712; iTF_00686871; iTF_00738007; iTF_01183479; iTF_01528858; iTF_01529731;
- 90% Identity
- -
- 80% Identity
- -