Ader010309.2
Basic Information
- Insect
- Anticlea derivata
- Gene Symbol
- -
- Assembly
- GCA_947579855.1
- Location
- OX388267.1:10875826-10894910[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.26 13 6.6 0.5 2 23 1626 1647 1625 1647 0.97 2 11 0.015 0.73 10.5 4.0 1 23 1654 1677 1654 1677 0.94 3 11 0.0043 0.21 12.2 0.4 1 23 1708 1731 1708 1731 0.96 4 11 0.03 1.5 9.5 4.5 2 23 1736 1758 1735 1758 0.94 5 11 0.012 0.62 10.8 0.1 2 20 1769 1787 1769 1789 0.95 6 11 0.00024 0.012 16.2 1.3 3 23 1799 1819 1799 1819 0.99 7 11 1.2 60 4.5 0.2 3 23 1835 1856 1834 1856 0.97 8 11 0.00016 0.0082 16.7 4.9 1 23 1871 1893 1871 1893 0.98 9 11 0.002 0.098 13.3 0.1 1 23 1899 1921 1899 1921 0.96 10 11 0.00095 0.047 14.3 8.7 1 23 1927 1949 1927 1949 0.98 11 11 0.00022 0.011 16.3 1.9 1 23 1955 1978 1955 1978 0.96
Sequence Information
- Coding Sequence
- ATGCAAGAAAACCATAAAAACACTATAGGAATAAGTCCTAAGCCCGAGATACTCAACCCGCAATGTTCCTGCACTGAATGCGAATCGATCACCTGCTTTGCCAAGAGACGATCAGTAGAACCCTGCACATGCAAAGTTTGTAGAAATTCCAAATCCTGCCTCTTTTACAACGCCAATATACATCTTAGCGAGAGCGATTCCGGTTCACTAAACTTCAAAGACATCGAGACTGAACTCGCAGGTGAAAACAAAACCAGGCAACTACTCAAGAACGAAATAATCTACGAGGTAGATAAAAATAATCGCATAAAAGCTATAAGCAAGAAAATATCCAGACTTACGTACAAAACCGTTGATTCAAAAGATAAAATAGAAGACAGAGACGACGGGCTTCCAATAAAAGACCACGGTGCGGCCGTCGCTAATTCTCTAATTCTTCAATCCTCGTTAATTCCTCCTAATAATAAAGAAGCCATCCCATCGACAGCAAAACTAAGCGCTCAAATAATGGATGTGCCGTACAAAAACTTCCAAAAATCTATGAGCAAACCCCATTTCACTCCTAACCTGCCCAACATGATATCCCCTTACGACATCATTAACAAAATCAAAGAAGCTTACAAAGCCTGTAGTTGTAAAGTCTGCGAATGCATCGGTGGAAAATCTTTGCAAAACGATCTTTGTAGATGCAAGCCCTGTGAGTGCAATGACTGTGCCAGTTTCAATAAACAAGTGAAAAGTTTCACAGATTTTGAGGGACTCGTTCCAAGAGACGACGAAGGATGTCCCTGTATAAGATGCGAGCGTGGTTCGTGCAAAGGGATAGGAAAAGGAAAAAATCGGGAGGCATGCGATTGCGTTGGCGTACTGAAGTGTAGCAATGTCAAAAATGATAGTTATTCATTCGATTGTAACTGTGAGCCATGTCAGTGCATAGAGTGCGAGTCGAGGTTCATGCATAGACATAGAGCAGTGATTGTCGCACCTGTTGGAGAAGATTTATCGGGTCGTAACGCGTGCCAATGCTCTCCTTGCGAATGCTTCGAATGCAGACACGGCATCAGGCTATCATCGAATCTACCGCACGAGATGTCTACCAACGTGAACAGACATCCTCATTGTAACTGCGAGATGTGCCTGAATGAAGCTTGTATCCCGGATGGCAACCAATCTTGCAGATGCGAGAGACAAAGCAAGGTGATGAGCAAACCATTCCAGCAAGACTCTCATGATTACGATATCCGAAGAACAACTGTCACATACGACGATGCACAAAGTCGCAAAGTCTTGGAGAACCATGATACAATAGCAATGTTCGCTGCTATATCTAATTCTTATCCAAAATGTGAGAAAATGATCAAACGATGTGATTGCAATCAGTGTGAATGTCTAGTTTGCAAATATAAAGAGGTTATGGAGAACAGTTTTTCATCTAAAGTATTTGAGCCAATTCAAAACTACCAACTAAGGAATAAAGCATATAACTGCAATTGCTCACCTTGTGAATGTCAGTTCTGTGCTAAGAGCGGCGCAGAACCACGAAATACTAAGAATTCAAATGTATGCGGATGTGACGTGTGTGATTGTATAATTTGTGATGGCTTAGCACGTTCCAACATTGAATCAGATAGGCACGAGACCAAGAAACCGAAGGGTACATTTTCTGCCAAAGAAGACTGTAGATGCAACCCCTGTGAATGTACCGAATGCGAAAAATTTATGTCTTCTTGTGTCGGTGATAAATTTCCGTGTTCAAACTGGAGATGCAATAGCTGTGACAAGGGAATCCATTCAGATGAAGTAATTTACCCAGTGAAGAAAGGGGTGCGACTGATTCCTTCGGTATTCAGAGGAAAAAATAAAGACGCGTTTATTGAATCTTGTATAAGCACTTTAGAAGCGAACGAAGAAATATTAAAACACCCTATAACATTTAAACCTTCGTTGAAGAAACCTTCTGCGTTTAGGTCATTCCAGAAAACTAAAACTCTAAATGATTGCAATATTGATACTAATCAAATATGTTTACAAAAAACTTGTTCGAACCATGAAATGGCTCCTGATCAGTTCACAAGAACCGAAATAGTGAAGCGCGCACAGATATCAAAATGTGCCAATGGCATAAACTTGCGTGGCAGAAGCACTGAAGCAGCTTTAGAGTCAAATCTCTCTGCTCGCTCCTCAATGTCATTCCAAAGAGACAGTGTAAGTGGCCCATCCAGATGTAGACTCAAGTCCTGGGAAAGCTCTTGCAATAGCTCAGGACATGATTATCCAAGTTACCTGATTCATTTTCCAAAAACAACAGTTGAAACTTGCTTGAATGACGTAATGCAGTTTGATACTGACAGAGGTATCAGCGTGACTCCAATAGCTTTGAGCTCAAAAAACAATGTAAGAAATACACATTTTAGAAATGTAAATGTTCAGAAACTGCCTAAAATAGGTCTGCCAATAAATACAGATCAAGAAAATCCAATATATACGAGTATCATGAATAATCTATCTCAAACAAAAGAACAGAATTATTTCAAATATTCTGCGCAAAATTTTGAGGACCATCCATATAGACCTCAAAACTTTGACGTTACGTCTAAAGATGAAAAAAAATCAAACGAAACACTTAAAAATCCATTATTGACTGACAGCTATCCCAGACCGTATGATAAACACAAAAGCAACAAGAACTGTTTCTTATTAGATGAAGATTATAAAAGCGTGCAGAATACTTTAAAGGAAGCTAGAGAATTTTCATTGCAGCTAAATCGATTGCTGGAAAAATATGAAAAAGCCAATAGAGAATTTGAGAGTGTGACCGAAAAGATAAAGAAGTCAAATGTATCTCTTTCAGATAAAACAAATATTACGAAACATCCTAACACAAAAAAATTGATTTATACATTTTATATGGATCAAGTGCCAACAAAAGAACATCAACAAAGCTCTTCTGGATCCTCCACAGAAGAATTGGTTACAATTAATGATAAAGCCAATAAAATTGATAAGGTTCACTTGGGACGAAGTCATGATCATATTTCCGAAGATCAAGTGGATAATAATTCTGAAAACAATTCAATTAATGAAACGAATGAGGGTCGTAATGAAAGTGGTGATGATATAAATAAAATCAACGAAGTTTTGAACACCATAACTGAAGAAAGAGAACAAATTGATGTTTCACACAAACAAGAAAAGAAGAGAAGGATTGTGACTAAACTTCATAGAAGGTTTAGCAAAATGTGTAAATGTAAGCGCTCTACAATCGGCTATAGAAGAATAAAAAGCTTAAATAGTTCTAGTATTGAAATAGACGCTAATGTCACAGTTGATACAAATAATGCCGCATGCCTGGATGATAAAAGACCGATTGAAATAAGACAAAAAGCTATTGATGAAATATTCAATATCGATAAAGATTTCAAGGCAGATGTTATTGACGTAAAATCACCTAAATTAGCTGAAGATGTGATCACGCTGAAGCTAGTTAACAAACCTGCGAAAGAAATAAATTCTGACTCTCAGATATATACGGACGATCATCATGTTTATCAGAAAGATGTGGTTATGATTAAAACACCAGTGGTTGAGCACAGCAGAAAGATTGTTGAGATAAAAGAAGAGGAACCGTGGCCCATAACGAAGAAAAACTTCCGTTTAGACACAAACACAAATGCGCCCAGTCGGAAACTTCCATTACTTACTTCGTTGGAGGTGGATGTAAAAGCAGCGGCGCTAATGATATCAAAGCAGCATTCTGGTGAAAATGCTACGTATCTCTATGAAAACAAGGCTCTAATAAAACTACACTCTGAAGTCAAGAAACTTCTGGACATGTCTATCTTACAAACGTTGGAAAGTAACATCAGTAGCCTGACGGGTTCCAGAAATAATTGTGAGACCATGAAAGTGAATTTTCTGAACGTGCGTCGCGTGTCCGATCACACGGTGCTTGTCAAGTGGAACACGCCCCGTGTGCTGAACAATGTTGAAGGGTACGAGTTGCTCGTCGATGGTCGTGCGATCAAGCAGATCCTGTGCCCGTCGCGTCGCATGGCGGTGGTGACTTGTCTCCCGCACAGCGACAGGGTCCTCATCACCGTTCGCACTGTCATAAGCTCGCGTTGCTGTGACCACTACCCTGCGGCTACATTGGGAATCTACAAAAACAGTTTTTGTTTTGAATGTGCAAGCTTGCTTGCTAAATATGAAGAGTTCAGATCGAAATGCTACAGAGCGCAAAGTATTTTGTCTGCGATCAAAACAGAAGATGCAGAGGAAATCTACAAGCGTATTCAAAACATTGATCGTAAGCAGAACAGACTGACATCAAACCTAGCTCCTTCACCAATAAAACATCATGATAATCAGGCACCAATCATGACCGATGATGACACAAAACTTGATTCTCGCATTGATGTTGTAGATGGCATCAAAATTGAAGACCATGATGAGATGAATGAATTTAGTGAAGATACTATTATTGACTATGAAGTGCATGATGTACTAAAGCTTGAATCAAAGATTAAAATCATTAAGAGAAAAAGTAATAAAGTGGAGGAAAAAATCAAAAGAAAAGCACTCAAAAAATCTAATCTAACTACTGAAAAGGAATCTTCGAGTGATGATGAACCTTTATCAAATAAAGCTATCAGAAATGCAGAATTAAATAAAATAAATTTATCAGATAAAATTGAAGATTTGACAATTCCTGAGCTCAAAGAAATTAGTACAATTGATAAGCCAAGAGCTGGCAAGAAATTCAAAGATCTAAGTGAGTTTGATGATTATGCTACCGTTGTGTTTTTAACTCCAGAAGATGCCAGAAAGGAGGTTTTTTTGAGAAAAGAAACCAGTAATTACATAAATTCTCCTTTAAAATGTGATCAGTGTTACAGAGGATATGAAGCTAAGGTGGCCTTTGACAATCATATGAAAAAGCATAGCATTGAGTATGGTGAGTACCAGTGTGACATCTGCCACCTCCGGTTTCCTCTTCAACGCTATCTTTGCAAACACAGGCTGGCTTCGCACAAAAGGAAGTTTTTCTGTAAAATATGCCCATATGTTTGCTTTTGTATGCATCAAGCGAAAACTCATGTTAGTCTACACAAGGGCAAGAAATACCCGTGTAAAGAATGCAGTGCAGTCTTCAGCATGCCGAATAGTCTTCTAATGCACAAACGGCAAAAACACCCGACCGAGTGCGTGTGCGACATCTGCGGACATACCTTTGCAACGACCCGGGGACTTTACTCGCATCACATGAAGCTTCATAGACAGAATACTAATGAAAAACTGGGTCCGAAATGCGAAGATTGCAACAAACATTTTGCTACAGAGGCGGCGTGGAAGGTACATCTGGTGCTCTCTTCGAAACACAACGTCAGTAACGGCTGTAAGTTCTGTGGTGATACGTTCAGCAGCTCGCAAGACCTGAAGAGTCACATGAGAGTACACGCTAGGAAGCATGCCAGTCGCGACATAATCAAGTTACCGGGACTTTGTTCTATGTGCGACAAATGGCTAGCCGACCGCTCCGAGTATAGACTGCATACAAGTACCGCCCACCCGCAGTCTGAGGCCGCGAGGAAACTGGACGCAGTGTCTCCTTTCGTCTGTGAAGTCTGCGGCAAGATGTTTAAGAAGCAGTGCTTCCTCACGTACCACCAGCGCAAGCACTCTGGCTCGCGGCCGTACGAGTGCGGCGAGTGCCGCAAGACGTTCCGGCTGGCGGGCGCGCTCGCCACGCACCGCGCGCTGCACCGCCGCGCGCGCGAGCACCGGTGCCACGTCTGCAACCGACACTTCACCTTCAAGAGCGTCCTCAACAAACATATGAAGGTGCACCTAGGCATCCGGCCGCACCGCTGCGACATCTGCGACAAATCTTTTATATCTCCGTGCGACGTGAAGATTCACATCAAATACGTGCACAATAAAGTGCCTTGGCCCAAGCGGGGCAGGACCAAACCGACTGAGCCTAACTATATTCAACACTAA
- Protein Sequence
- MQENHKNTIGISPKPEILNPQCSCTECESITCFAKRRSVEPCTCKVCRNSKSCLFYNANIHLSESDSGSLNFKDIETELAGENKTRQLLKNEIIYEVDKNNRIKAISKKISRLTYKTVDSKDKIEDRDDGLPIKDHGAAVANSLILQSSLIPPNNKEAIPSTAKLSAQIMDVPYKNFQKSMSKPHFTPNLPNMISPYDIINKIKEAYKACSCKVCECIGGKSLQNDLCRCKPCECNDCASFNKQVKSFTDFEGLVPRDDEGCPCIRCERGSCKGIGKGKNREACDCVGVLKCSNVKNDSYSFDCNCEPCQCIECESRFMHRHRAVIVAPVGEDLSGRNACQCSPCECFECRHGIRLSSNLPHEMSTNVNRHPHCNCEMCLNEACIPDGNQSCRCERQSKVMSKPFQQDSHDYDIRRTTVTYDDAQSRKVLENHDTIAMFAAISNSYPKCEKMIKRCDCNQCECLVCKYKEVMENSFSSKVFEPIQNYQLRNKAYNCNCSPCECQFCAKSGAEPRNTKNSNVCGCDVCDCIICDGLARSNIESDRHETKKPKGTFSAKEDCRCNPCECTECEKFMSSCVGDKFPCSNWRCNSCDKGIHSDEVIYPVKKGVRLIPSVFRGKNKDAFIESCISTLEANEEILKHPITFKPSLKKPSAFRSFQKTKTLNDCNIDTNQICLQKTCSNHEMAPDQFTRTEIVKRAQISKCANGINLRGRSTEAALESNLSARSSMSFQRDSVSGPSRCRLKSWESSCNSSGHDYPSYLIHFPKTTVETCLNDVMQFDTDRGISVTPIALSSKNNVRNTHFRNVNVQKLPKIGLPINTDQENPIYTSIMNNLSQTKEQNYFKYSAQNFEDHPYRPQNFDVTSKDEKKSNETLKNPLLTDSYPRPYDKHKSNKNCFLLDEDYKSVQNTLKEAREFSLQLNRLLEKYEKANREFESVTEKIKKSNVSLSDKTNITKHPNTKKLIYTFYMDQVPTKEHQQSSSGSSTEELVTINDKANKIDKVHLGRSHDHISEDQVDNNSENNSINETNEGRNESGDDINKINEVLNTITEEREQIDVSHKQEKKRRIVTKLHRRFSKMCKCKRSTIGYRRIKSLNSSSIEIDANVTVDTNNAACLDDKRPIEIRQKAIDEIFNIDKDFKADVIDVKSPKLAEDVITLKLVNKPAKEINSDSQIYTDDHHVYQKDVVMIKTPVVEHSRKIVEIKEEEPWPITKKNFRLDTNTNAPSRKLPLLTSLEVDVKAAALMISKQHSGENATYLYENKALIKLHSEVKKLLDMSILQTLESNISSLTGSRNNCETMKVNFLNVRRVSDHTVLVKWNTPRVLNNVEGYELLVDGRAIKQILCPSRRMAVVTCLPHSDRVLITVRTVISSRCCDHYPAATLGIYKNSFCFECASLLAKYEEFRSKCYRAQSILSAIKTEDAEEIYKRIQNIDRKQNRLTSNLAPSPIKHHDNQAPIMTDDDTKLDSRIDVVDGIKIEDHDEMNEFSEDTIIDYEVHDVLKLESKIKIIKRKSNKVEEKIKRKALKKSNLTTEKESSSDDEPLSNKAIRNAELNKINLSDKIEDLTIPELKEISTIDKPRAGKKFKDLSEFDDYATVVFLTPEDARKEVFLRKETSNYINSPLKCDQCYRGYEAKVAFDNHMKKHSIEYGEYQCDICHLRFPLQRYLCKHRLASHKRKFFCKICPYVCFCMHQAKTHVSLHKGKKYPCKECSAVFSMPNSLLMHKRQKHPTECVCDICGHTFATTRGLYSHHMKLHRQNTNEKLGPKCEDCNKHFATEAAWKVHLVLSSKHNVSNGCKFCGDTFSSSQDLKSHMRVHARKHASRDIIKLPGLCSMCDKWLADRSEYRLHTSTAHPQSEAARKLDAVSPFVCEVCGKMFKKQCFLTYHQRKHSGSRPYECGECRKTFRLAGALATHRALHRRAREHRCHVCNRHFTFKSVLNKHMKVHLGIRPHRCDICDKSFISPCDVKIHIKYVHNKVPWPKRGRTKPTEPNYIQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -