Basic Information

Insect: Anticlea derivata
Gene Symbol: ZNF639
Assembly: GCA_947579855.1
Location: OX388286.1:2406056-2420442[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0032 0.16 12.6 0.1 3 23 185 205 184 205 0.96

2 14 2.4 1.2e+02 3.6 0.1 1 23 209 231 209 231 0.88

3 14 0.0039 0.2 12.3 0.6 3 23 239 260 238 260 0.94

4 14 0.00063 0.031 14.8 2.8 2 23 270 291 269 291 0.97

5 14 0.00045 0.022 15.3 2.8 1 23 296 318 296 318 0.97

6 14 0.26 13 6.6 2.5 1 23 324 347 324 347 0.94

7 14 0.0062 0.31 11.7 2.2 2 19 353 370 353 374 0.89

8 14 1.6 79 4.1 0.1 2 10 379 387 378 391 0.88

9 14 1.6 79 4.1 0.1 2 10 435 443 434 447 0.88

10 14 2.5 1.3e+02 3.5 1.7 2 10 491 499 490 514 0.67

11 14 5.9e-05 0.0029 18.1 0.9 1 23 520 542 520 542 0.97

12 14 2.1e-05 0.0011 19.5 2.1 1 23 548 570 548 570 0.98

13 14 4.6e-06 0.00023 21.6 0.5 1 23 621 643 621 643 0.98

14 14 6.7e-06 0.00034 21.0 0.3 1 23 661 683 661 683 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0032	0.16	12.6	0.1	3	23	185	205	184	205	0.96
2	14	2.4	1.2e+02	3.6	0.1	1	23	209	231	209	231	0.88
3	14	0.0039	0.2	12.3	0.6	3	23	239	260	238	260	0.94
4	14	0.00063	0.031	14.8	2.8	2	23	270	291	269	291	0.97
5	14	0.00045	0.022	15.3	2.8	1	23	296	318	296	318	0.97
6	14	0.26	13	6.6	2.5	1	23	324	347	324	347	0.94
7	14	0.0062	0.31	11.7	2.2	2	19	353	370	353	374	0.89
8	14	1.6	79	4.1	0.1	2	10	379	387	378	391	0.88
9	14	1.6	79	4.1	0.1	2	10	435	443	434	447	0.88
10	14	2.5	1.3e+02	3.5	1.7	2	10	491	499	490	514	0.67
11	14	5.9e-05	0.0029	18.1	0.9	1	23	520	542	520	542	0.97
12	14	2.1e-05	0.0011	19.5	2.1	1	23	548	570	548	570	0.98
13	14	4.6e-06	0.00023	21.6	0.5	1	23	621	643	621	643	0.98
14	14	6.7e-06	0.00034	21.0	0.3	1	23	661	683	661	683	0.98

Sequence Information

Coding Sequence: ATGGAAATGTGCAGAGTGTGTCTCTATAATGGAACGGGGTTTGTTCCCATGGACGAGAATTTTATAGCCGAATACAACATGTTGACTAATTTGAATATAACAATGGAAGATATGCCTCTCTATACGTGTATCAAATGCTTTGAGGGGGCTAAATTCTGTGTTAAGTTTCGAGAAAAATGCATTGAATCAGACCAAAcattgaagaagatattatttccgGATACCAACGGAGTTATAAAAGAAAATGATGAAAAACTAATGATTGTGAAGAATGAGATAAAGATGGAGGTAAATGATGACATAGAGTTCTTAGAATCATGCTATAATTATGGTGAGGAATATGTAGAGCCTTCGACTGAATCAACCTCTATAGACGAGTGCATTCATGAAGAATATGAAGAAACAAGGATATCTGCATCTACAAATAAATGTTATACCGGTGAAGATGATATCCAACCTACTATTAAAGCTAGAGTGAAGAAACCGCAGAAGGATCGCTTGTGTAAAAGAAAATATGTGAGAAAGGAGATTGTGGTTGATGCCAAATTGCTCTGTGGAATATGCCCAAAGGAACTAAAGGATAAAGAAGAGCTTACCTCACATTTGGATCAACATAAAACAGACTTCGCGTGCGAAGTGTGCAATGAGAGTTTGATAAGCGTGCCGCATATGCTCGGTCATAGGATAGAGCATGTTCCGAAGGAGCAAAAAATATGCCACATATGCGGAAGGAAATTCATCTCCATTGAAAACTTGGAGTTTCATTACATGAGGGTGCATGAGATGGCGGAAAAGGATGCCCTAATTCAATGCAAGAAGTGTATAAAATCGTTCACATCAGTTAAACAACTTCAGAAACATAACAGAACCCACACGGGCTTAAAATATTCATGTGACCATTGCTCCAAGAGTTTTCGCTTTTTAAACGTTTTGAGAGTGCACATGGGCAAACATACTACCAAACCTGCATATAAATGTAACCTATGTGATTACACCAGCAAGTACTCTAATGGAATATACACACACAAGCTCCGTAAACACACCGCGGGGAACGCGGTGTGCAAGACGTGTGGCCGCGTGTTCGCGAGCCAGGAGAAGTTGGACAAGCACGACTGCCGGCATCGGCTGCCCGTGGTGTGCCCCGTCTGCGGGATCACCTTCCAGGCCAAGGGCAAGCATTCCGTGAGTTGTTATCTGTCTCACCCACTGTGCCAAGGGCAAGCATTCCGTGAGTTGTTATCTGTCTCACCCACTGTGTATCCTATCCTGCTAGCCCACGACTGCCGGCATCGGCTGCCCGTGGTGTGCCCCGTCTGCGGCATCACCTTCCAGGCCAAGGGCAAGCATTCCGTGAGTTGTTATCTGTCTCACCCACTGTGCCAAGGGCAAGCATTCCGTGAGTTGTTATCTGTCTCACCCACTGTGTATCCTATCCTGCTAGCCCACGACTGCCGGCATCGGCTGCCCGTGGTGTGCCCCGTCTGCGGCATCACCTTCCAGGCCAAGGGCAAGCATTCCTTCGCGGAGCACCTCCGGGGGCATAGCGCGACGCCGCTGTACCGCTGCACGCAGTGCCCCGCCGCCTTCCGCACGCGCAAGAACCTCAGCACGCACCTGGACCAGCACGCCGGCACGCCGCGGCACCGCTGCGACGTGTGCGAGCGCACCTTCTACTCGCAGTCCGTGCTCATCCGACACCGCAGGGTGCACACAGGGTGCACACGGGTACTCATCCGACACCGCAGGGTGCACACAGGTACTCATCCGACACCGCAGGGTGCACACAGGTACTCATCTGACACCGCAGGGTGCACACAGGTACTCATCCGTCACCGCAGGGTGCACACAGGTGAGAAGCCGTACGTTTGTGAAATCTGCAACCGTGGCTTTGGCGGGAACCACAACCTGAAGGTCCACATGAAGGTCCATGGAATTGTCAACCTGATCAAGAAGAAAGATCCTGTTCATGAAGAAAAAACATATGTGTGTGAAATCTGCAACCGTGGCTTTGGTGGCAGTCACAACCTGAAGATCCACATGATGGTCCATCTAAATGTCAGCCGGAAGAAAGATCCTATTCATGAGAAAAAGTAG
Protein Sequence: MEMCRVCLYNGTGFVPMDENFIAEYNMLTNLNITMEDMPLYTCIKCFEGAKFCVKFREKCIESDQTLKKILFPDTNGVIKENDEKLMIVKNEIKMEVNDDIEFLESCYNYGEEYVEPSTESTSIDECIHEEYEETRISASTNKCYTGEDDIQPTIKARVKKPQKDRLCKRKYVRKEIVVDAKLLCGICPKELKDKEELTSHLDQHKTDFACEVCNESLISVPHMLGHRIEHVPKEQKICHICGRKFISIENLEFHYMRVHEMAEKDALIQCKKCIKSFTSVKQLQKHNRTHTGLKYSCDHCSKSFRFLNVLRVHMGKHTTKPAYKCNLCDYTSKYSNGIYTHKLRKHTAGNAVCKTCGRVFASQEKLDKHDCRHRLPVVCPVCGITFQAKGKHSVSCYLSHPLCQGQAFRELLSVSPTVYPILLAHDCRHRLPVVCPVCGITFQAKGKHSVSCYLSHPLCQGQAFRELLSVSPTVYPILLAHDCRHRLPVVCPVCGITFQAKGKHSFAEHLRGHSATPLYRCTQCPAAFRTRKNLSTHLDQHAGTPRHRCDVCERTFYSQSVLIRHRRVHTGCTRVLIRHRRVHTGTHPTPQGAHRYSSDTAGCTQVLIRHRRVHTGEKPYVCEICNRGFGGNHNLKVHMKVHGIVNLIKKKDPVHEEKTYVCEICNRGFGGSHNLKIHMMVHLNVSRKKDPIHEKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -